Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00892
(745 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0433 + 3353255-3353374,3353532-3353828 94 9e-20
10_08_0018 + 14164103-14164225,14164596-14164892 92 4e-19
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 89 5e-18
12_02_0605 - 20924385-20924606,20924705-20924899 67 2e-11
08_02_0735 + 20564451-20564525,20566346-20566561 63 2e-10
05_05_0119 - 22512228-22512500,22512577-22512795 63 2e-10
12_02_0151 - 14468480-14468698,14468902-14469090 63 3e-10
07_03_0790 + 21536389-21536577,21536854-21537072 63 3e-10
07_03_0791 + 21539069-21539257,21539493-21539711 62 5e-10
03_05_0949 + 29089293-29089487,29089592-29089810 62 5e-10
03_02_0562 - 9469263-9469517,9469619-9469843 62 5e-10
05_01_0107 + 706936-707202,707231-707485 52 5e-07
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098 31 1.3
09_02_0555 - 10588685-10592038 29 2.9
11_01_0426 + 3271324-3271377,3272114-3272227,3272475-3272588,327... 29 5.2
12_02_1023 + 25393555-25393901,25396224-25396368 28 6.8
02_04_0054 + 19279579-19280772 28 6.8
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 28 6.8
08_01_0775 - 7531397-7531564,7531590-7532771 28 9.0
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 94.3 bits (224), Expect = 9e-20
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRIHR LK+R ++HGRVGATAAVYSAAILEYLTAEVLELAGNASK
Sbjct: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASK 88
Score = 92.3 bits (219), Expect = 4e-19
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 393
+ G DLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 82 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 134
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 92.3 bits (219), Expect = 4e-19
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 393
+ G DLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 83 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 135
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
+QFPVGRIHR LK R +++GRVGATAAVY+AAILEYLTAEVLELAGNASK
Sbjct: 40 IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASK 89
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +2
Query: 113 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
FPVGRIHR LK RT ++GRVGATAAVYSAAILEYLTAEVLELAGNASK
Sbjct: 65 FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASK 112
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV 360
+ G DLKVKRITPRHLQLAIRGDEELD+LIK TIAGG V
Sbjct: 106 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGVV 147
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGG 402
+ G D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH++L+ KKGG
Sbjct: 69 LAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 125
Score = 62.1 bits (144), Expect = 5e-10
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAAR 75
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH L+ KK G A
Sbjct: 29 LAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGSSA 88
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R+LK S R+G A VY AA+LEYL AEVLELAGNA++
Sbjct: 35 LQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAAR 83
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK G A
Sbjct: 77 LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGSAA 136
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 402
+ G D K RI PRH+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 67 LAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 402
+ G D K RI PRH+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 67 LAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G A
Sbjct: 67 LAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGSA 126
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 62.1 bits (144), Expect = 5e-10
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAAR 75
Score = 61.3 bits (142), Expect = 8e-10
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 402
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+I + L+ KKGG
Sbjct: 69 LAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKKGG 125
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R+LK + R+G A VY AA+LEYL AEVLELAGNA++
Sbjct: 37 LQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAAR 85
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 396
+ G D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 79 LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 133
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 396
+ G D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 93 LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 147
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE 226
LQFPVGRI R+LK + RVG A VY AA+LEYL AE
Sbjct: 34 LQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAE 72
>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
Length = 142
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 286 HLQLAIRGDEELDSLIKATIAGGG 357
HL L + G EELD L++ I GGG
Sbjct: 37 HLSLGVGGAEELDLLLQVGIGGGG 60
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -3
Query: 698 TSYIQNFKCPMNKQKLSLILIQSYFKSPYSLHISITYSYI 579
T + +N C + ++L +++Q +SPYS+H T Y+
Sbjct: 668 TLWNENRVCVPDNRELKQLILQEAHESPYSIHSGSTKMYL 707
>11_01_0426 +
3271324-3271377,3272114-3272227,3272475-3272588,
3272677-3272834,3273067-3273157,3273668-3273778
Length = 213
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 283 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 396
+ + L R DEELD L + GGV IH L+G+K
Sbjct: 141 QQMLLIKRQDEELDELSASVQRIGGVGLTIHDELVGQK 178
>12_02_1023 + 25393555-25393901,25396224-25396368
Length = 163
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 371 MCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKS*THFP 240
MCG T PPA VA + S + S +G+ HFP
Sbjct: 118 MCGWTAPPATVALPGVETSEAAAFESSTKKGISEEPPLLDAHFP 161
>02_04_0054 + 19279579-19280772
Length = 397
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 181 GSSLFCRYFGISYSRGFGVGGKCV*DLKVKRITP 282
G C F +S+++GFG+ KC+ LK + P
Sbjct: 221 GGDTTCLPFPVSFTKGFGLRSKCINWLKEWQALP 254
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 280 PRHLQLAIRGDEELDSLIKATIAGGGVIP 366
PRH+ + G E D L A+ AGG P
Sbjct: 174 PRHVSRVVIGSEVFDRLASASAAGGWAAP 202
>08_01_0775 - 7531397-7531564,7531590-7532771
Length = 449
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 686 QNFKCPMNKQKLSLILIQSYFKSPYSLHISITYSYI 579
+N C + ++L +++Q +SPYS+H T Y+
Sbjct: 351 ENRVCVPDDRELKQLILQEAHESPYSIHPGSTKMYL 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,625,086
Number of Sequences: 37544
Number of extensions: 408615
Number of successful extensions: 1077
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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