Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00892
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.       60   5e-11
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   0.81 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   1.1  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    26   1.4  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   4.3  

>Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.
          Length = 107

 Score = 60.5 bits (140), Expect = 5e-11
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = +2

Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
           LQFPVGRIHR L+    +  RVG  A VY AA++EYL AEVLELAGN ++
Sbjct: 8   LQFPVGRIHRLLRKGNYAE-RVGPGAPVYLAAVMEYLAAEVLELAGNRAR 56



 Score = 44.4 bits (100), Expect = 4e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = +1

Query: 262 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 396
           K +RI PR LQLAIR DEE + L+ + TIA GGV+P+I   L+ K+
Sbjct: 60  KERRIIPR-LQLAIRNDEEENKLLRRVTIAQGGVLPNIQAVLLPKR 104


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 140 LKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 244
           L  R T H RV     ++  A L YL AE+  ++G
Sbjct: 464 LVTRFTDHVRVIEPIFIFVMAYLAYLNAEIFHMSG 498


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 274 YASLLNLRRISRQLQNLCCKIFQNSGRINCCRSSYAPVA 158
           + + LNL  +   +Q +CC+ F  S  + C  S +  VA
Sbjct: 174 FVAWLNLVDLKIYIQEICCRFFTFSSSLCCFLSVWFVVA 212


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 338 QLSLAEASSHTYTNLSLERKAVLVHPFNF 424
           Q+ +  AS++    LS++R   + HP NF
Sbjct: 306 QVCVTYASTYVLVALSIDRYDAITHPMNF 334


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/16 (50%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -1

Query: 223 CCKIF-QNSGRINCCR 179
           C ++F  N+GR++CCR
Sbjct: 328 CGRLFISNNGRVSCCR 343


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,188
Number of Sequences: 2352
Number of extensions: 15788
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)