Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00892
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g52740.1 68414.m05962 histone H2A, putative similar to histon... 93 2e-19
At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800 92 3e-19
At2g38810.3 68415.m04767 histone H2A, putative strong similarity... 92 4e-19
At2g38810.2 68415.m04766 histone H2A, putative strong similarity... 92 4e-19
At2g38810.1 68415.m04765 histone H2A, putative strong similarity... 92 4e-19
At4g13570.1 68417.m02114 histone H2A, putative similar to histon... 79 4e-15
At3g20670.1 68416.m02616 histone H2A, putative strong similarity... 64 7e-11
At5g54640.1 68418.m06803 histone H2A identical to histone H2A Ar... 63 2e-10
At5g02560.1 68418.m00190 histone H2A, putative similar to histon... 63 2e-10
At4g27230.1 68417.m03910 histone H2A, putative strong similarity... 63 2e-10
At1g51060.1 68414.m05740 histone H2A, putative similar to histon... 63 2e-10
At1g08880.1 68414.m00988 histone H2A, putative Strong similarity... 62 4e-10
At1g54690.1 68414.m06235 histone H2A, putative strong similarity... 61 9e-10
At5g59870.1 68418.m07507 histone H2A, putative similar to histon... 60 1e-09
At5g27670.1 68418.m03317 histone H2A, putative similar to histon... 60 2e-09
At5g12970.1 68418.m01487 C2 domain-containing protein contains I... 29 3.3
At4g19980.1 68417.m02925 expressed protein ; expression support... 29 3.3
At5g16660.1 68418.m01950 expressed protein 29 4.3
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 28 5.7
At3g23295.1 68416.m02938 expressed protein 28 5.7
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 28 5.7
At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic stess-sen... 27 9.9
>At1g52740.1 68414.m05962 histone H2A, putative similar to histone
H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 134
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGR+HR LK R+T+HGRVGATAAVY+AAILEYLTAEVLELAGNASK
Sbjct: 35 LQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASK 84
Score = 90.6 bits (215), Expect = 9e-19
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 393
+ G DLKVKRI+PRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 78 LAGNASKDLKVKRISPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 130
>At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800
Length = 136
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 393
+ G DLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 80 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 132
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
+QFPVGRIHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASK
Sbjct: 37 IQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
>At2g38810.3 68415.m04767 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 393
+ G DLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSL+ K
Sbjct: 80 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNK 132
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
+QFPVGRIHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASK
Sbjct: 37 IQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
>At2g38810.2 68415.m04766 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 393
+ G DLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSL+ K
Sbjct: 80 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNK 132
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
+QFPVGRIHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASK
Sbjct: 37 IQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
>At2g38810.1 68415.m04765 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 393
+ G DLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSL+ K
Sbjct: 80 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNK 132
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
+QFPVGRIHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASK
Sbjct: 37 IQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
>At4g13570.1 68417.m02114 histone H2A, putative similar to histone
H2A.F/Z from Arabidopsis thaliana GI:2407800, histone
H2A.F/Z Strongylocentrotus purpuratus SP|P08991, histone
H2A variant Drosophila melanogaster SP|P08985; contains
Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 118
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 256 DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIH 375
DLKVKRITPRHLQLAIRGDEELD+LIK TI GG VIPHIH
Sbjct: 79 DLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH 118
Score = 64.5 bits (150), Expect = 7e-11
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +2
Query: 113 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
F V RIH+ LKNR ++H VGAT VY +ILEYLT EVL+LA N SK
Sbjct: 31 FQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSK 78
>At3g20670.1 68416.m02616 histone H2A, putative strong similarity to
histone H2A GB:AAF64418 GI:7595337 from Arabidopsis
thaliana, Triticum aestivum GI:536892; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 64.5 bits (150), Expect = 7e-11
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LKN + RVGA A VY AA+LEYL AEVLELAGNA++
Sbjct: 25 LQFPVGRIARFLKNGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G
Sbjct: 67 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASK 126
Query: 412 P 414
P
Sbjct: 127 P 127
>At5g54640.1 68418.m06803 histone H2A identical to histone H2A
Arabidopsis thaliana GI:7595337
Length = 130
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G
Sbjct: 67 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
Query: 412 P 414
P
Sbjct: 127 P 127
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73
>At5g02560.1 68418.m00190 histone H2A, putative similar to histone
H2A from Pisum sativum SP|P25470, Zea mays SP|P40280,
Petroselinum crispum SP|P19177; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 153
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R+LK S RVG A VY AA+LEYL AEVLELAGNA++
Sbjct: 33 LQFPVGRIGRYLKKGRYSK-RVGTGAPVYLAAVLEYLAAEVLELAGNAAR 81
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+ LA+R DEEL +L+K TIA GGV+P+I+ L+ KK A
Sbjct: 75 LAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAA 134
>At4g27230.1 68417.m03910 histone H2A, putative strong similarity to
histone H2A Arabidopsis thaliana GI:7595337, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G
Sbjct: 67 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
Query: 412 P 414
P
Sbjct: 127 P 127
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73
>At1g51060.1 68414.m05740 histone H2A, putative similar to histone
H2A GI:7595337 from Arabidopsis thaliana, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++
Sbjct: 25 LQFPVGRIARFLKKGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 411
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G
Sbjct: 67 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASK 126
Query: 412 P 414
P
Sbjct: 127 P 127
>At1g08880.1 68414.m00988 histone H2A, putative Strong similarity to
histone H2A Cicer arietinum SP|O65759, Picea abies
SP|P35063; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4; ESTs gb|ATTS3874,gb|T46627,gb|T14194 come
from this gene
Length = 142
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK+ + RVGA A VY +A+LEYL AEVLELAGNA++
Sbjct: 31 LQFPVGRIARFLKSGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAAR 79
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 402
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K G
Sbjct: 73 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
>At1g54690.1 68414.m06235 histone H2A, putative strong similarity to
histone H2A GI:3204129 SP|O65759 from Cicer arietinum,
Picea abies SP|P35063; contains Pfam profile PF00125
Core histone H2A/H2B/H3/H4
Length = 142
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + RVGA A VY +A+LEYL AEVLELAGNA++
Sbjct: 31 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAAR 79
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 402
+ G D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K G
Sbjct: 73 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
>At5g59870.1 68418.m07507 histone H2A, putative similar to histone
H2A Petroselinum crispum SP|P19177, Lycopersicon
esculentum SP|P25469, Zea mays SP|P40280; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R LK + R+G A VY AA+LEYL AEVLELAGNA++
Sbjct: 33 LQFPVGRITRFLKKGRYAQ-RLGGGAPVYMAAVLEYLAAEVLELAGNAAR 81
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 396
+ G D K RI PRHL LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 75 LAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKK 129
>At5g27670.1 68418.m03317 histone H2A, putative similar to histone
H2A Lycopersicon esculentum SP|P25469, Pisum sativum
SP|P25470, Petroselinum crispum SP|P19177; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2
Query: 107 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 256
LQFPVGRI R+LK + R G+ A VY AA+LEYL AEVLELAGNA++
Sbjct: 34 LQFPVGRIARYLKKGRYAL-RYGSGAPVYLAAVLEYLAAEVLELAGNAAR 82
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 235 VGGKCV*DLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 396
+ G D K RI PRHL LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 76 LAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKK 130
>At5g12970.1 68418.m01487 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 769
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = +3
Query: 339 NYRWRRRHPTH--TQISH 386
N+RWR RHP H T++SH
Sbjct: 628 NFRWRPRHPPHMDTRLSH 645
>At4g19980.1 68417.m02925 expressed protein ; expression supported
by MPSS
Length = 127
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 172 RSYGSSLFCRYFGISYSRGFGVGGKC 249
R GSSL CRY +SYS F GG C
Sbjct: 57 RRQGSSLQCRYDPMSYSLNFD-GGAC 81
>At5g16660.1 68418.m01950 expressed protein
Length = 168
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 483 ARCVTTAGIKCSIILSSHNLKLNGCTRTAFLSN 385
A C+ TA + S + SH +K NG + T LS+
Sbjct: 2 ASCIATAPLSLSGVSQSHYVKANGLSTTTKLSS 34
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +3
Query: 342 YRWRRRHPTH--TQISH 386
YRWR RHP H T++SH
Sbjct: 633 YRWRPRHPPHMDTRLSH 649
>At3g23295.1 68416.m02938 expressed protein
Length = 74
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 623 KSPYSLHIS-ITYSYIFSPDQQFQSHHCPLH 534
K + L IS T++Y+ S D Q HH P+H
Sbjct: 5 KRHFDLCISRFTHTYVRSSDTQTHQHHVPVH 35
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +3
Query: 342 YRWRRRHPTH--TQISH 386
YRWR RHP H T++SH
Sbjct: 636 YRWRPRHPPHMDTRLSH 652
>At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic
stess-sensitive mutant 1 (OSM1) identical to SP|Q946Y7
Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1)
{Arabidopsis thaliana}; identical to cDNA syntaxin of
plants 61 (SYP61) GI:16041649
Length = 245
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 265 VKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 396
V+ + R + L + DEELD L K+ GGV IH L+ ++
Sbjct: 145 VQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQE 188
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,504
Number of Sequences: 28952
Number of extensions: 327172
Number of successful extensions: 807
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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