Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00891
         (838 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   5.0  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   8.7  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   8.7  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   8.7  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   8.7  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    23   8.7  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   8.7  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    23   8.7  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 651 KSQQTPCPKWDLQLS*AALTDPRNFSIQL 565
           K     C  W LQLS    T PR + + L
Sbjct: 33  KDNGKTCKSWPLQLSGVCCTVPRCWQVSL 61


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 588 DPLEPPTTVEDPTLGRVFAVTSHGDTI 668
           DP +PP  +  PT    F + +HG  +
Sbjct: 26  DPEQPPVLLAHPTDCDKFLICNHGTPV 52


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 588 DPLEPPTTVEDPTLGRVFAVTSHGDTI 668
           DP +PP  +  PT    F + +HG  +
Sbjct: 26  DPEQPPVLLAHPTDCDKFLICNHGTPV 52


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 588 DPLEPPTTVEDPTLGRVFAVTSHGDTI 668
           DP +PP  +  PT    F + +HG  +
Sbjct: 26  DPEQPPVLLAHPTDCDKFLICNHGTPV 52


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 588 DPLEPPTTVEDPTLGRVFAVTSHGDTI 668
           DP +PP  +  PT    F + +HG  +
Sbjct: 26  DPEQPPVLLAHPTDCDKFLICNHGTPV 52


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 588 DPLEPPTTVEDPTLGRVFAVTSHGDTI 668
           DP +PP  +  PT    F + +HG  +
Sbjct: 26  DPEQPPVLLAHPTDCDKFLICNHGTPV 52


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 588 DPLEPPTTVEDPTLGRVFAVTSHGDTI 668
           DP +PP  +  PT    F + +HG  +
Sbjct: 26  DPEQPPVLLAHPTDCDKFLICNHGTPV 52


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 588 DPLEPPTTVEDPTLGRVFAVTSHGDTI 668
           DP +PP  +  PT    F + +HG  +
Sbjct: 26  DPEQPPVLLAHPTDCDKFLICNHGTPV 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 929,579
Number of Sequences: 2352
Number of extensions: 20487
Number of successful extensions: 212
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)