Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00888
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0505 - 4005211-4005234,4005235-4005432,4005522-4006006,400...    28   7.0  
02_02_0351 + 9257204-9261388                                           28   9.2  

>12_01_0505 -
           4005211-4005234,4005235-4005432,4005522-4006006,
           4006533-4006700,4007128-4007203,4007327-4007409,
           4007511-4007589,4007685-4007753,4008174-4008266,
           4008668-4008713,4009398-4009522
          Length = 481

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 584 IEDVNVRKEHPIRTDHVCCSVSNINCTAHLASTLK*ELR 468
           ++ + + K HP+   H+C  + N N T+  ++T +  LR
Sbjct: 283 LDMLELNKGHPLYLSHLCSKMKNANVTSAKSNTFQLFLR 321


>02_02_0351 + 9257204-9261388
          Length = 1394

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +1

Query: 361 LQTSLPQFYYLNFLKLMFNVRILNRDLNNIL 453
           L  ++ +FY+L FL L ++  IL +D+N+++
Sbjct: 680 LPNAVSRFYHLKFLDLGYSKCILPKDINHLV 710


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,743,095
Number of Sequences: 37544
Number of extensions: 337234
Number of successful extensions: 552
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)