Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00886
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032713-1|AAH32713.1| 1032|Homo sapiens toll-like receptor 9 pr...    31   2.8  
AY359085-1|AAQ89443.1| 1032|Homo sapiens TLR9 protein.                 31   2.8  
AF259263-1|AAF72190.1|  975|Homo sapiens toll-like receptor 9 fo...    31   2.8  
AF259262-1|AAF72189.1| 1032|Homo sapiens toll-like receptor 9 fo...    31   2.8  
AF246973-1|AAG01735.1|  216|Homo sapiens toll-like receptor 9 pr...    31   2.8  
AF246972-1|AAG01734.1|  333|Homo sapiens toll-like receptor 9 pr...    31   2.8  
AF245704-1|AAF78037.1| 1032|Homo sapiens toll-like receptor 9 pr...    31   2.8  
AB045180-1|BAB19259.1| 1032|Homo sapiens toll-like receptor 9 pr...    31   2.8  

>BC032713-1|AAH32713.1| 1032|Homo sapiens toll-like receptor 9
           protein.
          Length = 1032

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 131 SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 182


>AY359085-1|AAQ89443.1| 1032|Homo sapiens TLR9 protein.
          Length = 1032

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 131 SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 182


>AF259263-1|AAF72190.1|  975|Homo sapiens toll-like receptor 9 form
           B protein.
          Length = 975

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 74  SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 125


>AF259262-1|AAF72189.1| 1032|Homo sapiens toll-like receptor 9 form
           A protein.
          Length = 1032

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 131 SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 182


>AF246973-1|AAG01735.1|  216|Homo sapiens toll-like receptor 9
           protein.
          Length = 216

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 155 SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 206


>AF246972-1|AAG01734.1|  333|Homo sapiens toll-like receptor 9
           protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 154 SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 205


>AF245704-1|AAF78037.1| 1032|Homo sapiens toll-like receptor 9
           protein.
          Length = 1032

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 131 SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 182


>AB045180-1|BAB19259.1| 1032|Homo sapiens toll-like receptor 9
           protein.
          Length = 1032

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 661 AYFQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFRS 503
           +Y  I+T+P L K SL+ L +    ILM DS++      +  L  D + Y+++
Sbjct: 131 SYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKN 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,978,327
Number of Sequences: 237096
Number of extensions: 1057232
Number of successful extensions: 1987
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)