Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00885
         (724 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IAP3 Cluster: Putative uncharacterized protein PF08_0...    34   4.1  
UniRef50_Q8IB10 Cluster: Putative uncharacterized protein MAL8P1...    33   7.1  
UniRef50_Q8NDV2 Cluster: Probable G-protein coupled receptor 26;...    33   9.4  

>UniRef50_Q8IAP3 Cluster: Putative uncharacterized protein PF08_0122;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PF08_0122 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1997

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 143  KGKKRKANTNLVTSEPKNV-KQNSLVNSDNKN 235
            KGKK+K NTN++  + KNV K    V  D KN
Sbjct: 1035 KGKKKKKNTNIMEKDTKNVEKDTKNVEKDTKN 1066


>UniRef50_Q8IB10 Cluster: Putative uncharacterized protein
           MAL8P1.74; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.74 - Plasmodium
           falciparum (isolate 3D7)
          Length = 701

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +2

Query: 74  NFFGTVNYHYY*FISKMQKQVPAKGKKRKANTNLVTSEPKNVKQNSLVNSDNKNS 238
           NF  ++NY Y  FI   Q +   KGK    N N+  ++  N   N ++N+DN N+
Sbjct: 173 NFQNSLNYFYKHFIITTQGEHDKKGKNIINNDNINNNDNINNNDN-IINNDNINN 226


>UniRef50_Q8NDV2 Cluster: Probable G-protein coupled receptor 26;
           n=32; Euteleostomi|Rep: Probable G-protein coupled
           receptor 26 - Homo sapiens (Human)
          Length = 337

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +3

Query: 18  VPCGTYLK*TNPKLFDSKR--TFSAQ*IIIIINLYPKCRNKCLLKVKNVKQIQT 173
           V C TYLK      F  KR    + Q ++++++L+P  R +CL + K  +Q  T
Sbjct: 187 VLCCTYLKVLKVARFHCKRIDVITMQTLVLLVDLHPSVRERCLEEQKRRRQRAT 240


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,760,430
Number of Sequences: 1657284
Number of extensions: 6844768
Number of successful extensions: 18966
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18907
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)