Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00884
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.86 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = +1

Query: 61  NFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF 240
           +F P  S+  + +  +  D + K+ V N G N        +  ++    N W+ RN    
Sbjct: 463 DFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDM 522

Query: 241 AFVEL 255
            F+EL
Sbjct: 523 -FIEL 526


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -1

Query: 684 INEVSDLNTYKSLRQLMQVALLLAIVYKLLHTHFHMY 574
           + ++SD+  YK   QL+ +ALL+ +  +L+   F +Y
Sbjct: 210 VQDLSDIFYYKDTAQLVSLALLMQLT-QLVPALFVIY 245


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -2

Query: 233 GGFRATHTLRMLPYLENIFSISYLD--ALVPKLPTYTLQ 123
           G F+A + L  L  L N+ S  Y D  AL P L    L+
Sbjct: 206 GAFKAENLLVTLTVLPNVNSTVYYDPRALSPNLEFVVLE 244


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 402 SMIGGGDYDCVTC 364
           S++  G+Y CVTC
Sbjct: 864 SIVSLGEYKCVTC 876


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 654 KSLRQLMQVALLLAIVYKLLHTHFHMYTLKTISLSHCSSKIC 529
           K + +L    LLL I+  L+ T + MY L    L  C+S  C
Sbjct: 226 KKINKLYGHQLLLTILTYLIWTIYEMYHLAI--LWSCTSTNC 265


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 296 IKSTNRVFSITGVFNSTNANPGGFRATHTL 207
           +K    +  I G+F   N  PG FR    L
Sbjct: 64  LKPIYALMRIVGIFPIKNTEPGMFRVAPEL 93


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +1

Query: 520 RSYADFRRTM*KTY-SFKR 573
           R Y DFRR   +TY S KR
Sbjct: 204 RGYEDFRRDFLRTYWSAKR 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,294
Number of Sequences: 336
Number of extensions: 3472
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)