Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00884
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 81 3e-15
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 81 3e-15
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 81 3e-15
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 81 3e-15
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 81 3e-15
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 81 3e-15
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 81 3e-15
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 81 3e-15
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 81 3e-15
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 81 3e-15
Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor, arginine... 79 1e-14
L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor ... 79 1e-14
BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor, argini... 79 1e-14
BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor, argini... 79 1e-14
BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor, argini... 79 1e-14
AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing facto... 79 1e-14
AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens ... 78 3e-14
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 46 2e-04
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 46 2e-04
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 46 2e-04
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 46 2e-04
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 46 2e-04
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 46 2e-04
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 46 2e-04
U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein. 41 0.004
U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein. 41 0.004
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 41 0.004
CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein. 41 0.004
CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein. 41 0.004
BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein pr... 41 0.004
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 41 0.004
BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein. 41 0.004
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 41 0.004
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 41 0.004
AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant pr... 41 0.004
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 40 0.007
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 40 0.007
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 40 0.007
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 40 0.007
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 40 0.007
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 40 0.007
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 40 0.007
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 40 0.007
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 40 0.007
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 40 0.007
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 40 0.007
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 40 0.010
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 40 0.010
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 40 0.010
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 40 0.010
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 40 0.010
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 40 0.010
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 40 0.010
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 39 0.017
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 39 0.017
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 39 0.017
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 39 0.017
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 39 0.017
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 39 0.017
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 39 0.017
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 39 0.017
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 39 0.017
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 39 0.017
AF020307-1|AAC39543.1| 189|Homo sapiens HRS protein. 37 0.068
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 37 0.090
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 37 0.090
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 37 0.090
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 37 0.090
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 37 0.090
BC002696-1|AAH02696.1| 207|Homo sapiens HNRPCL1 protein protein. 37 0.090
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 37 0.090
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 37 0.090
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 37 0.090
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 37 0.090
AL022101-6|CAA17879.1| 293|Homo sapiens heterogeneous nuclear r... 37 0.090
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 37 0.090
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 36 0.12
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 36 0.12
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 36 0.12
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 36 0.12
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 36 0.12
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 36 0.12
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 36 0.12
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 36 0.12
M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2 ... 36 0.16
M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein. 36 0.16
BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear r... 36 0.16
BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear r... 36 0.16
BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein. 36 0.16
BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear r... 36 0.16
BC031090-1|AAH31090.1| 291|Homo sapiens RALYL protein protein. 36 0.16
BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.16
BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear r... 36 0.16
BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.16
BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear r... 36 0.16
AF495530-1|AAO85517.1| 291|Homo sapiens RALY-like protein isofo... 36 0.16
AF495529-1|AAO85516.1| 291|Homo sapiens RALY-like protein isofo... 36 0.16
AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear r... 36 0.16
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 36 0.21
L38696-1|AAC28898.1| 291|Homo sapiens autoantigen p542 protein. 36 0.21
BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein, au... 36 0.21
BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein, au... 36 0.21
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 36 0.21
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 36 0.21
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 36 0.21
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 36 0.21
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 36 0.21
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 36 0.21
AL031668-6|CAB43742.1| 290|Homo sapiens RNA binding protein, au... 36 0.21
AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein, au... 36 0.21
AL031668-4|CAI22149.1| 237|Homo sapiens RNA binding protein, au... 36 0.21
AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein, au... 36 0.21
AL031668-1|CAI22146.1| 89|Homo sapiens RNA binding protein, au... 36 0.21
AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein (au... 36 0.21
AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.21
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 35 0.27
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 35 0.27
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 35 0.27
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 35 0.27
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 35 0.27
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 35 0.27
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 35 0.27
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 35 0.36
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 35 0.36
BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein pr... 35 0.36
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 35 0.36
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 35 0.36
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 35 0.36
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 35 0.36
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 35 0.36
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 35 0.36
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 35 0.36
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 35 0.36
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 35 0.36
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 35 0.36
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 35 0.36
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 34 0.48
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 34 0.48
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 34 0.48
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 34 0.48
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 34 0.48
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 34 0.48
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 34 0.48
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 34 0.48
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 34 0.48
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 34 0.63
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 34 0.63
AK025511-1|BAB15157.1| 132|Homo sapiens protein ( Homo sapiens ... 34 0.63
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 34 0.63
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 34 0.63
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 33 0.83
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 33 0.83
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 33 0.83
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 33 0.83
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 33 0.83
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 33 0.83
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 33 0.83
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 33 0.83
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 33 0.83
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 33 0.83
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 33 1.1
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 33 1.1
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 33 1.1
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 33 1.1
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 33 1.1
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 33 1.1
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 33 1.1
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 33 1.1
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 33 1.1
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 33 1.1
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 33 1.1
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 33 1.1
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 33 1.1
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 33 1.1
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 33 1.1
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 33 1.1
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 33 1.1
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 33 1.1
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 33 1.1
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 33 1.1
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 33 1.1
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 33 1.1
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 33 1.1
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 33 1.1
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 33 1.1
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 33 1.1
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 33 1.5
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 33 1.5
U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein. 33 1.5
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 33 1.5
BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein. 32 1.9
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 32 1.9
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 32 1.9
AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein. 32 1.9
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 32 1.9
AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protei... 32 1.9
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 32 1.9
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 32 2.5
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 32 2.5
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 32 2.5
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 32 2.5
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 32 2.5
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 32 2.5
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 32 2.5
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 32 2.5
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 32 2.5
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 32 2.5
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 32 2.5
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 32 2.5
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 32 2.5
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 32 2.5
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 32 2.5
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 32 2.5
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 32 2.5
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 32 2.5
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 32 2.5
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 32 2.5
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 32 2.5
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 32 2.5
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 32 2.5
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 32 2.5
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 32 2.5
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 32 2.5
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 32 2.5
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 31 3.4
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 31 3.4
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 31 4.5
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 31 4.5
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 31 4.5
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 31 4.5
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 31 4.5
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 31 4.5
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 31 4.5
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 31 4.5
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 31 4.5
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 31 4.5
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 31 4.5
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 31 4.5
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 31 4.5
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 31 4.5
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 31 4.5
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 31 4.5
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 31 4.5
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 31 4.5
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 31 4.5
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 31 4.5
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 31 4.5
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 31 4.5
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 31 4.5
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 31 4.5
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 31 4.5
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 31 5.9
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 31 5.9
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 31 5.9
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 31 5.9
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 31 5.9
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 31 5.9
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 31 5.9
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 31 5.9
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 31 5.9
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 31 5.9
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 30 7.8
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 30 7.8
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 30 7.8
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 30 7.8
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 30 7.8
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 30 7.8
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 30 7.8
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 30 7.8
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 30 7.8
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 30 7.8
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 30 7.8
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 30 7.8
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 30 7.8
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 30 7.8
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 30 7.8
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 30 7.8
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 30 7.8
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 30 7.8
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 30 7.8
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 30 7.8
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 30 7.8
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 30 7.8
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 30 7.8
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 30 7.8
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 30 7.8
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 30 7.8
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 30 7.8
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 30 7.8
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 30 7.8
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 81.4 bits (192), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 57
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 55 EDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 79.4 bits (187), Expect = 1e-14
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 118 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVE + P
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP 56
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDA D+VR LDG CG R+RVE+SNG
Sbjct: 54 EDPRDAADAVRELDGRTLCGCRVRVELSNG 83
>L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 79.4 bits (187), Expect = 1e-14
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 118 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVE + P
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP 56
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDA D+VR LDG CG R+RVE+SNG
Sbjct: 54 EDPRDAADAVRELDGRTLCGCRVRVELSNG 83
>BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 79.4 bits (187), Expect = 1e-14
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 118 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVE + P
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP 56
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDA D+VR LDG CG R+RVE+SNG
Sbjct: 54 EDPRDAADAVRELDGRTLCGCRVRVELSNG 83
>BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 79.4 bits (187), Expect = 1e-14
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 118 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVE + P
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP 56
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDA D+VR LDG CG R+RVE+SNG
Sbjct: 54 EDPRDAADAVRELDGRTLCGCRVRVELSNG 83
>BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 79.4 bits (187), Expect = 1e-14
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 118 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVE + P
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP 56
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDA D+VR LDG CG R+RVE+SNG
Sbjct: 54 EDPRDAADAVRELDGRTLCGCRVRVELSNG 83
>AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 79.4 bits (187), Expect = 1e-14
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 118 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVE + P
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP 56
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
EDPRDA D+VR LDG CG R+RVE+SNG
Sbjct: 54 EDPRDAADAVRELDGRTLCGCRVRVELSNG 83
>AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 7. ).
Length = 137
Score = 78.2 bits (184), Expect = 3e-14
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 94 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPP FAFVE + P
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDP 57
Score = 54.4 bits (125), Expect = 4e-07
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 234 RICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
R EDPRDAED+VRGLDG CG+R+RVE+S G
Sbjct: 48 RFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTG 84
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVELKTP 264
C++YVGNL + +IE +F KYG IR++ + R P FAFVE + P
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDP 64
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDAED+V G DG G R+RVE
Sbjct: 62 EDPRDAEDAVYGRDGYDYDGYRLRVE 87
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVELKTP 264
C++YVGNL + +IE +F KYG IR++ + R P FAFVE + P
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDP 64
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDAED+V G DG G R+RVE
Sbjct: 62 EDPRDAEDAVYGRDGYDYDGYRLRVE 87
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVELKTP 264
C++YVGNL + +IE +F KYG IR++ + R P FAFVE + P
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDP 64
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDAED+V G DG G R+RVE
Sbjct: 62 EDPRDAEDAVYGRDGYDYDGYRLRVE 87
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVELKTP 264
C++YVGNL + +IE +F KYG IR++ + R P FAFVE + P
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDP 64
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDAED+V G DG G R+RVE
Sbjct: 62 EDPRDAEDAVYGRDGYDYDGYRLRVE 87
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVELKTP 264
C++YVGNL + +IE +F KYG IR++ + R P FAFVE + P
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDP 64
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDAED+V G DG G R+RVE
Sbjct: 62 EDPRDAEDAVYGRDGYDYDGYRLRVE 87
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVELKTP 264
C++YVGNL + +IE +F KYG IR++ + R P FAFVE + P
Sbjct: 48 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDP 96
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDAED+V G DG G R+RVE
Sbjct: 94 EDPRDAEDAVYGRDGYDYDGYRLRVE 119
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVELKTP 264
C++YVGNL + +IE +F KYG IR++ + R P FAFVE + P
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDP 64
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDAED+V G DG G R+RVE
Sbjct: 62 EDPRDAEDAVYGRDGYDYDGYRLRVE 87
>U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein.
Length = 107
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein.
Length = 107
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein
protein.
Length = 107
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein.
Length = 107
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 47
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 45 EDPRDADDAVYELDGKELCSERVTIE 70
>AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant
protein.
Length = 326
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTP 264
C+V++G L A + ++E+ F YG IR++ + R GF FVE + P
Sbjct: 7 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDP 50
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVE 332
EDPRDA+D+V LDG C R+ +E
Sbjct: 48 EDPRDADDAVYELDGKELCSERVTIE 73
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ L+T + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 39.9 bits (89), Expect = 0.010
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ L++ + + +L
Sbjct: 46 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLESRTLAEIAKAEL 101
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 39.9 bits (89), Expect = 0.010
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ L++ + + +L
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLESRTLAEIAKAEL 137
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 39.9 bits (89), Expect = 0.010
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ L++ + + +L
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLESRTLAEIAKAEL 137
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 39.9 bits (89), Expect = 0.010
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ L++ + + +L
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLESRTLAEIAKAEL 137
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 39.9 bits (89), Expect = 0.010
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ L++ + + +L
Sbjct: 46 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLESRTLAEIAKAEL 101
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 39.9 bits (89), Expect = 0.010
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ L++ + + +L
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLESRTLAEIAKAEL 137
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 39.9 bits (89), Expect = 0.010
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ L++ + + +L
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLESRTLAEIAKAEL 137
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 39.1 bits (87), Expect = 0.017
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL + ++ E +++F+KYG V++ + GF F++L++ + + +L
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLESRALAEIAKAEL 352
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVELKTP 264
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV + P
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDP 62
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVE 332
R EDPRDAED++ G +G R+RVE
Sbjct: 58 RFEDPRDAEDAIYGRNGYDYGQCRLRVE 85
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVELKTP 264
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV + P
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDP 62
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVE 332
R EDPRDAED++ G +G R+RVE
Sbjct: 58 RFEDPRDAEDAIYGRNGYDYGQCRLRVE 85
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVELKTP 264
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV + P
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDP 62
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVE 332
R EDPRDAED++ G +G R+RVE
Sbjct: 58 RFEDPRDAEDAIYGRNGYDYGQCRLRVE 85
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVELKTP 264
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV + P
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDP 62
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVE 332
R EDPRDAED++ G +G R+RVE
Sbjct: 58 RFEDPRDAEDAIYGRNGYDYGQCRLRVE 85
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 39.1 bits (87), Expect = 0.017
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL + ++ E +++F+KYG V++ + GF F++L++ + + +L
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLESRALAEIAKAEL 352
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 39.1 bits (87), Expect = 0.017
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL + ++ E +++F+KYG V++ + GF F++L++ + + +L
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLESRALAEIAKAEL 352
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 39.1 bits (87), Expect = 0.017
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL + ++ E +++F+KYG V++ + GF F++L++ + + +L
Sbjct: 224 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLESRALAEIAKAEL 279
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 39.1 bits (87), Expect = 0.017
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKTPVMLKTLFVDL 294
C+++VGNL + ++ E +++F+KYG V++ + GF F++L++ + + +L
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLESRALAEIAKAEL 352
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVELKTP 264
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV + P
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDP 62
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVE 332
R EDPRDAED++ G +G R+RVE
Sbjct: 58 RFEDPRDAEDAIYGRNGYDYGQCRLRVE 85
>AF020307-1|AAC39543.1| 189|Homo sapiens HRS protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.068
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 124 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
C+V++G L A + ++E+ F YG IR++ + R GF FV+
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVD 43
Score = 33.9 bits (74), Expect = 0.63
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 258 DPRDAEDSVRGLDGTRCCGTRIRVE 332
DPRDA+D+V LDG C R+ +E
Sbjct: 43 DPRDADDAVYELDGKELCSERVTIE 67
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>BC002696-1|AAH02696.1| 207|Homo sapiens HNRPCL1 protein protein.
Length = 207
Score = 36.7 bits (81), Expect = 0.090
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHK---GFAFVQ 56
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>AL022101-6|CAA17879.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C-like 1 protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.090
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHK---GFAFVQ 56
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KDAARDM 69
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.12
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 52 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 216
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 103 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 162
Query: 217 --VARNPPGFAFVELKTP 264
V GFAFVE + P
Sbjct: 163 DSVTMKHKGFAFVEYEVP 180
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 36.3 bits (80), Expect = 0.12
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 52 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 216
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 60 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 119
Query: 217 --VARNPPGFAFVELKTP 264
V GFAFVE + P
Sbjct: 120 DSVTMKHKGFAFVEYEVP 137
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 36.3 bits (80), Expect = 0.12
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 52 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 216
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 60 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 119
Query: 217 --VARNPPGFAFVELKTP 264
V GFAFVE + P
Sbjct: 120 DSVTMKHKGFAFVEYEVP 137
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 36.3 bits (80), Expect = 0.12
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 79 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFA 243
+++ R R + C+VYVG++ + I + F+ +G I+++ W V GFA
Sbjct: 54 NLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFA 113
Query: 244 FVELKTP 264
FVE + P
Sbjct: 114 FVEYEVP 120
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 36.3 bits (80), Expect = 0.12
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 79 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFA 243
+++ R R + C+VYVG++ + I + F+ +G I+++ W V GFA
Sbjct: 97 NLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFA 156
Query: 244 FVELKTP 264
FVE + P
Sbjct: 157 FVEYEVP 163
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 36.3 bits (80), Expect = 0.12
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 79 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFA 243
+++ R R + C+VYVG++ + I + F+ +G I+++ W V GFA
Sbjct: 97 NLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFA 156
Query: 244 FVELKTP 264
FVE + P
Sbjct: 157 FVEYEVP 163
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 36.3 bits (80), Expect = 0.12
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 52 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 216
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 100 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 159
Query: 217 --VARNPPGFAFVELKTP 264
V GFAFVE + P
Sbjct: 160 DSVTMKHKGFAFVEYEVP 177
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.12
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 52 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 216
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 103 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 162
Query: 217 --VARNPPGFAFVELKTP 264
V GFAFVE + P
Sbjct: 163 DSVTMKHKGFAFVEYEVP 180
>M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2
protein mRNA. ).
Length = 303
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein.
Length = 290
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein.
Length = 250
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC031090-1|AAH31090.1| 291|Homo sapiens RALYL protein protein.
Length = 291
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K +IE IFSKYG I V + G+AFV+
Sbjct: 19 INSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHK---GYAFVQ 61
>BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 56
>AF495530-1|AAO85517.1| 291|Homo sapiens RALY-like protein isoform
2 protein.
Length = 291
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K +IE IFSKYG I V + G+AFV+
Sbjct: 19 INSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHK---GYAFVQ 61
>AF495529-1|AAO85516.1| 291|Homo sapiens RALY-like protein isoform
1 protein.
Length = 291
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K +IE IFSKYG I V + G+AFV+
Sbjct: 19 INSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHK---GYAFVQ 61
>AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 variant protein.
Length = 313
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG I V + GFAFV+
Sbjct: 21 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQ 63
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKT 261
K+++GNL A++ EI +F +YG + + +N GF +E KT
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-YGFVHIEDKT 46
>L38696-1|AAC28898.1| 291|Homo sapiens autoantigen p542 protein.
Length = 291
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 306
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 307
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKT 261
K+++GNL A++ EI +F +YG + + +N GF +E KT
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-YGFVHIEDKT 46
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKT 261
K+++GNL A++ EI +F +YG + + +N GF +E KT
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-YGFVHIEDKT 46
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKT 261
K+++GNL A++ EI +F +YG + + +N GF +E KT
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-YGFVHIEDKT 46
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKT 261
K+++GNL A++ EI +F +YG + + +N GF +E KT
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-YGFVHIEDKT 46
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKT 261
K+++GNL A++ EI +F +YG + + +N GF +E KT
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-YGFVHIEDKT 46
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELKT 261
K+++GNL A++ EI +F +YG + + +N GF +E KT
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN-YGFVHIEDKT 46
>AL031668-6|CAB43742.1| 290|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 290
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 306
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>AL031668-4|CAI22149.1| 237|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 237
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 181
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>AL031668-1|CAI22146.1| 89|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 89
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein
(autoantigenic, hnRNP-associated with lethal yellow)
long i protein.
Length = 307
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein, alternate transcript protein.
Length = 306
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
++ +V++GNL T K ++E IFSKYG + V + G+AFV+
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQ 61
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVELKTP 264
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VE + P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVELKTP 264
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VE + P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVELKTP 264
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VE + P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVELKTP 264
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VE + P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVELKTP 264
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VE + P
Sbjct: 139 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 190
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVELKTP 264
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VE + P
Sbjct: 85 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 136
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVELKTP 264
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VE + P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric cap
binding complex CBC protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVE 252
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVE 87
>D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein 1
protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVE 252
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVE 87
>BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein
protein.
Length = 119
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVE 252
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE
Sbjct: 58 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVE 106
>BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVE 252
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVE 87
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 34.7 bits (76), Expect = 0.36
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 240
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 241 AFVELKTPVMLKTLFVDLMEHAAVAPG 321
AFV+ +T K ++ + + PG
Sbjct: 138 AFVKFQTHAEAKAA-INTLHSSRTLPG 163
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 34.7 bits (76), Expect = 0.36
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
ED RDA+D+V L+G CG R+ VE + G
Sbjct: 43 EDSRDADDAVYELNGKELCGERVIVEHARG 72
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELK 258
+VY+G L N + +I++ FS YG + V + G+ FVE +
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFE 43
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 34.7 bits (76), Expect = 0.36
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVW-----VARNPPGFAFVELKTP 264
S +++V NL +++ ++EK+FSKYG + + + + P GFAF+ P
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 453
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 34.7 bits (76), Expect = 0.36
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVW-----VARNPPGFAFVELKTP 264
S +++V NL +++ ++EK+FSKYG + + + + P GFAF+ P
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 453
>BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVE 252
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVE 87
>AY644767-1|AAV85455.1| 156|Homo sapiens cell
proliferation-inducing gene 55 protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVE 252
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVE 87
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 34.7 bits (76), Expect = 0.36
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
ED RDA+D+V L+G CG R+ VE + G
Sbjct: 43 EDSRDADDAVYELNGKELCGERVIVEHARG 72
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELK 258
+VY+G L N + +I++ FS YG + V + G+ FVE +
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFE 43
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVELKTP 264
S K+++G L S + FSK+G IR V R+P GF FV P
Sbjct: 16 SSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 68
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 34.7 bits (76), Expect = 0.36
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
ED RDA+D+V L+G CG R+ VE + G
Sbjct: 77 EDSRDADDAVYELNGKELCGERVIVEHARG 106
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELK 258
+VY+G L N + +I++ FS YG + V + G+ FVE +
Sbjct: 37 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFE 77
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 34.7 bits (76), Expect = 0.36
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVW-----VARNPPGFAFVELKTP 264
S +++V NL +++ ++EK+FSKYG + + + + P GFAF+ P
Sbjct: 414 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 466
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 34.3 bits (75), Expect = 0.48
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 118 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFAFVELKTP 264
+ C+VYVG++ + I + F+ +G I+++ W V GFAFVE + P
Sbjct: 109 IMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 162
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA binding
protein (Drosophila) protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
P +K S R D K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 119 PIQVKPAASEGRGEDR--KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG 171
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.63
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 121 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 249
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV
Sbjct: 190 SRKVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFV 232
>AK025511-1|BAB15157.1| 132|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21858 fis, clone HEP02301. ).
Length = 132
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 594 HTHFHMYTLKTISLSHCSSKICITSQYLVCCQNDCDGRVIVN 469
HTH H+++L+T SL H + +C C++ C R V+
Sbjct: 28 HTHAHVHSLQTCSLLHTCTFMCTPQMSSQTCKHTCTHRTHVS 69
>AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CELF6
protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
P +K S R D K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 119 PIQVKPAASEGRGEDR--KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG 171
>AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-binding
protein protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
P +K S R D K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 119 PIQVKPAASEGRGEDR--KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG 171
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.83
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 228
K++VG L + ++ +E++FSKYG I V V ++
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 40
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.83
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 228
K++VG L + ++ +E++FSKYG I V V ++
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 40
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
P +K S R D K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 127 PIQVKPADSESRGEDR--KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 179
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 33.5 bits (73), Expect = 0.83
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVELKTP 264
K+++G L S + FSK+G IR V R+P GF FV P
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 72
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.83
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 228
K++VG L + ++ +E++FSKYG I V V ++
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 40
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.83
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 228
K++VG L + ++ +E++FSKYG I V V ++
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 40
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 33.5 bits (73), Expect = 0.83
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 228
K++VG L + ++ +E++FSKYG I V V ++
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 40
>AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein
BRUNOL4 protein.
Length = 294
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
P +K S R D K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 127 PIQVKPADSESRGEDR--KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 179
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.83
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 228
K++VG L + ++ +E++FSKYG I V V ++
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 40
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.83
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 228
K++VG L + ++ +E++FSKYG I V V ++
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 40
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 240
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 241 AFVELKT 261
AFV+ +T
Sbjct: 138 AFVKFQT 144
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR-----NPPGFAFVELKT 261
VYV L N + IE++F K GN+ + + +P GFAFVE +T
Sbjct: 127 VYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFET 175
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 240
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 241 AFVELKT 261
AFV+ +T
Sbjct: 138 AFVKFQT 144
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 240
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 241 AFVELKT 261
AFV+ +T
Sbjct: 138 AFVKFQT 144
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 240
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 241 AFVELKT 261
AFV+ +T
Sbjct: 138 AFVKFQT 144
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 240
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 241 AFVELKT 261
AFV+ +T
Sbjct: 138 AFVKFQT 144
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 RIEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+ ED RDAED++ LD CG +I ++ + G
Sbjct: 57 QFEDVRDAEDALHNLDRKWICGRQIEIQFAQG 88
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 73 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 240
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 56 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 113
Query: 241 AFVELKT 261
AFV+ +T
Sbjct: 114 AFVKFQT 120
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
ED RDA+D+V L+G CG + VE + G
Sbjct: 43 EDSRDADDAVYELNGKELCGEHVIVEHARG 72
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELK 258
+VY+G L N + +I++ FS YG + V + G+ FVE +
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFE 43
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
ED RDA+D+V L+G CG + VE + G
Sbjct: 43 EDSRDADDAVYELNGKELCGEHVIVEHARG 72
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELK 258
+VY+G L N + +I++ FS YG + V + G+ FVE +
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFE 43
>U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein.
Length = 135
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
ED RDA+D+V L+G CG + VE + G
Sbjct: 43 EDSRDADDAVYELNGKELCGEHVIVEHARG 72
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVELK 258
+VY+G L N + +I++ FS YG + V + G+ FVE +
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFE 43
>AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ90115 fis, clone HEMBA1006770, weakly similar to
FLOWERING TIME CONTROL PROTEIN FCA. ).
Length = 484
Score = 32.7 bits (71), Expect = 1.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 152 KLFVGMLNKQQSEEDVRRLFEAFGNIEECTILRGPDG 188
>BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein.
Length = 368
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 22 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG 58
>BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 152 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 188
>BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 152 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 188
>AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein.
Length = 376
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 30 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG 66
>AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ44762 fis, clone BRACE3031743, moderately
similar to Homo sapiens bruno-like 4, RNA binding
protein. ).
Length = 250
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 19 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 55
>AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like
factor 4 protein.
Length = 486
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 153 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 189
>AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protein
LIP9 protein.
Length = 213
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 36 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 72
>AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA binding
protein variant protein.
Length = 510
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 178 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 214
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF----AFVELKTPVMLKTLFVDL 294
K+++G + ++ +I +FS +G I + R P G AFV T M +T +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTA-IKA 167
Query: 295 MEHAAVAPG 321
M A G
Sbjct: 168 MHQAQTMEG 176
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+D RDA+D+V L+G CG R+ VE + G
Sbjct: 43 DDLRDADDAVYELNGKDLCGERVIVEHARG 72
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
+VY+G L A + ++E+ F YG I V + G+ FVE
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVE 41
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+D RDA+D+V L+G CG R+ VE + G
Sbjct: 43 DDLRDADDAVYELNGKDLCGERVIVEHARG 72
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
+VY+G L A + ++E+ F YG I V + G+ FVE
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVE 41
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGFAFVELKT 261
K++VG LG + ++ K+F +G I V R P G AFV+ +T
Sbjct: 38 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQT 86
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF----AFVELKTPVMLKTLFVDL 294
K+++G + ++ +I +FS +G I + R P G AFV T M +T +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTA-IKA 167
Query: 295 MEHAAVAPG 321
M A G
Sbjct: 168 MHQAQTMEG 176
>BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein.
Length = 291
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGFAFVELKT 261
K++VG LG + ++ K+F +G I V R P G AFV+ +T
Sbjct: 87 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQT 135
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+D RDA+D+V L+G CG R+ VE + G
Sbjct: 43 DDLRDADDAVYELNGKDLCGERVIVEHARG 72
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
+VY+G L A + ++E+ F YG I V + G+ FVE
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVE 41
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+D RDA+D+V L+G CG R+ VE + G
Sbjct: 43 DDLRDADDAVYELNGKDLCGERVIVEHARG 72
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
+VY+G L A + ++E+ F YG I V + G+ FVE
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVE 41
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGFAFVELKT 261
K++VG LG + ++ K+F +G I V R P G AFV+ +T
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQT 144
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+D RDA+D+V L+G CG R+ VE + G
Sbjct: 43 DDLRDADDAVYELNGKDLCGERVIVEHARG 72
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
+VY+G L A + ++E+ F YG I V + G+ FVE
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVE 41
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+D RDA+D+V L+G CG R+ VE + G
Sbjct: 43 DDLRDADDAVYELNGKDLCGERVIVEHARG 72
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
+VY+G L A + ++E+ F YG I V + G+ FVE
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVE 41
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SSKSARICICRIEDPRDAEDSVRGLDGTRCCGTRIRVEMS 338
+ +S R D RDAED++ +DG G +RV+M+
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF----AFVELKTPVMLKTLFVDL 294
K+++G + ++ +I +FS +G I + R P G AFV T M +T +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTA-IKA 167
Query: 295 MEHAAVAPG 321
M A G
Sbjct: 168 MHQAQTMEG 176
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF----AFVELKTPVMLKTLFVDL 294
K+++G + ++ +I +FS +G I + R P G AFV T M +T +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTA-IKA 167
Query: 295 MEHAAVAPG 321
M A G
Sbjct: 168 MHQAQTMEG 176
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF----AFVELKTPVMLKTLFVDL 294
K+++G + ++ +I +FS +G I + R P G AFV T M +T +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTA-IKA 167
Query: 295 MEHAAVAPG 321
M A G
Sbjct: 168 MHQAQTMEG 176
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF----AFVELKTPVMLKTLFVDL 294
K+++G + ++ +I +FS +G I + R P G AFV T M +T +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTA-IKA 167
Query: 295 MEHAAVAPG 321
M A G
Sbjct: 168 MHQAQTMEG 176
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVML 273
E D K+++G L + +E F KYG I V + ++ GFAFV ++P
Sbjct: 3 EADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 274 KTLFVDL 294
K D+
Sbjct: 63 KAAARDM 69
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 344
+D RDA+D+V L+G CG R+ VE + G
Sbjct: 43 DDLRDADDAVYELNGKDLCGERVIVEHARG 72
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVE 252
+VY+G L A + ++E+ F YG I V + G+ FVE
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVE 41
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF----AFVELKTPVMLKTLFVDL 294
K+++G + ++ +I +FS +G I + R P G AFV T M +T +
Sbjct: 167 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTA-IKA 225
Query: 295 MEHAAVAPG 321
M A G
Sbjct: 226 MHQAQTMEG 234
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 109 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVELKTPVMLK 276
E D + K+++G L ++ ++ +F K+G I V + ++ GFAF+ + P K
Sbjct: 3 EADHAGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAK 62
Query: 277 TLFVDL 294
D+
Sbjct: 63 NAAKDM 68
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELKTPVMLKTLFVD 291
K+++G L + +E F KYG I V + ++ GFAFV ++P K D
Sbjct: 3 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 62
Query: 292 L 294
+
Sbjct: 63 M 63
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 127
Query: 292 LMEH 303
EH
Sbjct: 128 QKEH 131
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELK 258
++V L + +++++FS+YG+IR + + R+ G+AF+E K
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 100
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELK 258
++V L + +++++FS+YG+IR + + R+ G+AF+E K
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 100
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 127
Query: 292 LMEH 303
EH
Sbjct: 128 QKEH 131
>BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein.
Length = 563
Score = 31.1 bits (67), Expect = 4.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG 237
+++GNL + S+ E+ + F KYG I V + R G
Sbjct: 12 LFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARG 47
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELK 258
++V L + +++++FS+YG+IR + + R+ G+AF+E K
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 105
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELK 258
++V L + +++++FS+YG+IR + + R+ G+AF+E K
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 105
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +1
Query: 136 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFV 249
V NL S + ++F KYG + +V++ R P GFAFV
Sbjct: 18 VDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELK 258
++V L + +++++FS+YG+IR + + R+ G+AF+E K
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 100
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELK 258
++V L + +++++FS+YG+IR + + R+ G+AF+E K
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 105
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVA---RNPPGFAFVELK 258
V++ NLG + IFS +GNI + VA + P G+ FV +
Sbjct: 135 VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQ 180
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 292 LMEH 303
EH
Sbjct: 130 QKEH 133
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVELKTPVMLKT 279
+YVGN+ A+ E+E F G++ V + + +P GFA++E ++T
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVELK 258
++V L + +++++FS+YG+IR + + R+ G+AF+E K
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 105
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 292 LMEH 303
EH
Sbjct: 130 QKEH 133
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 292 LMEH 303
EH
Sbjct: 130 QKEH 133
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 292 LMEH 303
EH
Sbjct: 130 QKEH 133
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 292 LMEH 303
EH
Sbjct: 130 QKEH 133
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVA---RNPPGFAFVELK 258
V++ NLG + IFS +GNI + VA + P G+ FV +
Sbjct: 92 VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQ 137
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVA---RNPPGFAFVELK 258
V++ NLG + IFS +GNI + VA + P G+ FV +
Sbjct: 92 VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQ 137
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 292 LMEH 303
EH
Sbjct: 130 QKEH 133
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 127 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVELKTPVMLKTLFVD 291
K++VG L + SK +++ F+K+G + + + +P GF F+ K ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 292 LMEH 303
EH
Sbjct: 130 QKEH 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,498,946
Number of Sequences: 237096
Number of extensions: 1950825
Number of successful extensions: 4946
Number of sequences better than 10.0: 293
Number of HSP's better than 10.0 without gapping: 4606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4936
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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