Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00883
         (788 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56450.1 68418.m07046 mitochondrial substrate carrier family ...    43   3e-04
At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial...    33   0.22 
At5g13490.1 68418.m01556 ADP, ATP carrier protein 2, mitochondri...    32   0.38 
At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondri...    32   0.38 
At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondri...    32   0.38 
At3g06370.1 68416.m00735 sodium proton exchanger, putative (NHX3...    28   6.1  
At5g27150.1 68418.m03240 sodium proton exchanger / Na+/H+ antipo...    28   8.1  

>At5g56450.1 68418.m07046 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 330

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = +1

Query: 52  QDRGNLAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 159
           +  G  +F++GA SN+ R TG A +LV YDE+K+ L
Sbjct: 290 RSEGLASFYRGALSNMFRSTGSAAILVFYDEVKRFL 325


>At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial,
           putative / ADP/ATP translocase, putative / adenine
           nucleotide translocator, putative similar to
           mitochondrial ADP,ATP carrier protein SP:P12857 from
           [Zea mays]
          Length = 379

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +1

Query: 52  QDRGNLAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 159
           ++ G  + FKGA +N+LR   GA VL  YD+++ ++
Sbjct: 334 KNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV 369


>At5g13490.1 68418.m01556 ADP, ATP carrier protein 2, mitochondrial
           / ADP/ATP translocase 2 / adenine nucleotide
           translocator 2 (ANT2) identical to SWISS-PROT:P40941
           ADP,ATP carrier protein 2, mitochondrial precursor
           (Adenine nucleotide translocator 2) [Arabidopsis
           thaliana]
          Length = 385

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +1

Query: 61  GNLAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 159
           G  + FKGA +N+LR   GA VL  YD+++ ++
Sbjct: 343 GAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV 375


>At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondrial
           / ADP/ATP translocase 1 / adenine nucleotide
           translocator 1 (ANT1) identical to SWISS-PROT:P31167
           ADP,ATP carrier protein 1 (Adenine nucleotide
           translocator 1) [Arabidopsis thaliana]
          Length = 381

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +1

Query: 52  QDRGNLAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 159
           ++ G  + FKGA +N+LR   GA VL  YD+++ ++
Sbjct: 336 KNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIV 371


>At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondrial
           / ADP/ATP translocase 1 / adenine nucleotide
           translocator 1 (ANT1) identical to SWISS-PROT:P31167
           ADP,ATP carrier protein 1 (Adenine nucleotide
           translocator 1) [Arabidopsis thaliana]
          Length = 381

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +1

Query: 52  QDRGNLAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 159
           ++ G  + FKGA +N+LR   GA VL  YD+++ ++
Sbjct: 336 KNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIV 371


>At3g06370.1 68416.m00735 sodium proton exchanger, putative (NHX3)
           similar to sodium proton exchanger (Nhx1) GB:AAD16946
           [Arabidopsis thaliana]; Member of The Monovalent
           Cation:Proton Antiporter (CPA1) Family, PMID:11500563
          Length = 503

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 544 NFMLKEVFNVLSILNLSFVGIENFHFFLHS 633
           ++ML E+F++ SIL + F GI   H+  H+
Sbjct: 264 SYMLAELFHLSSILTVFFCGIVMSHYTWHN 293


>At5g27150.1 68418.m03240 sodium proton exchanger / Na+/H+
           antiporter (NHX1) identical to Na+/H+ exchanger
           [Arabidopsis thaliana] gi|6650177|gb|AAF21755 and sodium
           proton exchanger Nhx1 [Arabidopsis thaliana]
           gi|4324597|gb|AAD16946; Member of The Monovalent
           Cation:Proton Antiporter (CPA1) Family, PMID:11500563
          Length = 538

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 544 NFMLKEVFNVLSILNLSFVGIENFHFFLHSGSE 642
           ++ML E+F++  IL + F GI   H+  H+ +E
Sbjct: 261 SYMLAELFDLSGILTVFFCGIVMSHYTWHNVTE 293


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,062,301
Number of Sequences: 28952
Number of extensions: 277346
Number of successful extensions: 499
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)