Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00880
(774 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 137 7e-33
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 137 7e-33
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 134 6e-32
At3g51800.2 68416.m05681 metallopeptidase M24 family protein sim... 42 6e-04
At3g51800.1 68416.m05680 metallopeptidase M24 family protein sim... 42 6e-04
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 30 2.0
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 30 2.0
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 28 7.9
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 137 bits (332), Expect = 7e-33
Identities = 60/84 (71%), Positives = 75/84 (89%)
Frame = +3
Query: 6 FNPRYDPLVKGVQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNL 185
FNP +DPL+ +EAT GIK +G+DVRLCD+GAA+QEVMES+EVE++G+++QVK IRNL
Sbjct: 230 FNPMFDPLLAASREATYTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNL 289
Query: 186 NGHSIEPYKIHAGKTVPIVKGGEQ 257
NGHSI PY+IHAGK+VPIVKGGEQ
Sbjct: 290 NGHSIGPYQIHAGKSVPIVKGGEQ 313
Score = 134 bits (324), Expect = 6e-32
Identities = 61/101 (60%), Positives = 75/101 (74%)
Frame = +2
Query: 257 TRMEENEIYAIETFGSTGRGQVHDDMDCSHYMKNFDQQFVPLRLQSSKQLLNVINKNFGT 436
T+MEE E YAIETFGSTG+G V +D++CSHYMKNFD VPLRL +KQLL INKNF T
Sbjct: 314 TKMEEGEFYAIETFGSTGKGYVREDLECSHYMKNFDAGHVPLRLPRAKQLLATINKNFST 373
Query: 437 LAFCKRWLERAGASRYAMALKDLCTRGWWTPTRPSATSRGA 559
LAFC+R+L+R G ++Y MALK+LC G P P +G+
Sbjct: 374 LAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGS 414
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +1
Query: 514 GVVDAYPPLCDIKGCYTAQFEHTILLRPTCKK 609
G+V YPPLCD+KG Y +QFEHTILLRPTCK+
Sbjct: 400 GIVQPYPPLCDVKGSYVSQFEHTILLRPTCKE 431
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 137 bits (332), Expect = 7e-33
Identities = 60/84 (71%), Positives = 75/84 (89%)
Frame = +3
Query: 6 FNPRYDPLVKGVQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNL 185
FNP +DPL+ +EAT GIK +G+DVRLCD+GAA+QEVMES+EVE++G+++QVK IRNL
Sbjct: 230 FNPMFDPLLAASREATYTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNL 289
Query: 186 NGHSIEPYKIHAGKTVPIVKGGEQ 257
NGHSI PY+IHAGK+VPIVKGGEQ
Sbjct: 290 NGHSIGPYQIHAGKSVPIVKGGEQ 313
Score = 134 bits (324), Expect = 6e-32
Identities = 61/101 (60%), Positives = 75/101 (74%)
Frame = +2
Query: 257 TRMEENEIYAIETFGSTGRGQVHDDMDCSHYMKNFDQQFVPLRLQSSKQLLNVINKNFGT 436
T+MEE E YAIETFGSTG+G V +D++CSHYMKNFD VPLRL +KQLL INKNF T
Sbjct: 314 TKMEEGEFYAIETFGSTGKGYVREDLECSHYMKNFDAGHVPLRLPRAKQLLATINKNFST 373
Query: 437 LAFCKRWLERAGASRYAMALKDLCTRGWWTPTRPSATSRGA 559
LAFC+R+L+R G ++Y MALK+LC G P P +G+
Sbjct: 374 LAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGS 414
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +1
Query: 514 GVVDAYPPLCDIKGCYTAQFEHTILLRPTCKK 609
G+V YPPLCD+KG Y +QFEHTILLRPTCK+
Sbjct: 400 GIVQPYPPLCDVKGSYVSQFEHTILLRPTCKE 431
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 134 bits (324), Expect = 6e-32
Identities = 61/109 (55%), Positives = 78/109 (71%)
Frame = +2
Query: 233 PDSERWRATRMEENEIYAIETFGSTGRGQVHDDMDCSHYMKNFDQQFVPLRLQSSKQLLN 412
P+ T+MEE E+YAIETFGSTG+G V +D++CSHYMKN+D VPLRL +KQLL
Sbjct: 308 PNVRGGEQTKMEEGELYAIETFGSTGKGYVREDLECSHYMKNYDVGHVPLRLPRAKQLLA 367
Query: 413 VINKNFGTLAFCKRWLERAGASRYAMALKDLCTRGWWTPTRPSATSRGA 559
INKNF TLAFC+R+L+R G ++Y MALK+LC G P P +G+
Sbjct: 368 TINKNFSTLAFCRRYLDRLGETKYLMALKNLCDSGIIEPCPPVCDVKGS 416
Score = 128 bits (309), Expect = 4e-30
Identities = 59/84 (70%), Positives = 72/84 (85%)
Frame = +3
Query: 6 FNPRYDPLVKGVQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNL 185
FNP +DPL+ ++AT GIK +GVDVRLCDVGAAVQEVMES+EVE++G++YQVK IRNL
Sbjct: 232 FNPMFDPLLAASRDATYTGIKEAGVDVRLCDVGAAVQEVMESYEVEINGKVYQVKSIRNL 291
Query: 186 NGHSIEPYKIHAGKTVPIVKGGEQ 257
NGHSI Y+IHA K+VP V+GGEQ
Sbjct: 292 NGHSIGRYQIHAEKSVPNVRGGEQ 315
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1
Query: 439 RVLQALAGTRRGLSLRDGAEGPLHKGVVDAYPPLCDIKGCYTAQFEHTILLRPTCKK 609
R L L T+ ++L++ + G+++ PP+CD+KG Y +QFEHTILLRPTCK+
Sbjct: 381 RYLDRLGETKYLMALKNLCDS----GIIEPCPPVCDVKGSYISQFEHTILLRPTCKE 433
>At3g51800.2 68416.m05681 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 401
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 266 EENEIYAIETFGSTGRG--QVHDDMDCSHYMKNFDQQFVPLRLQSSKQLLNVINKNFGTL 439
EENE+YAI+ STG G ++ D+ + Y K+ + L++++S+ +++ I +NF +
Sbjct: 216 EENEVYAIDIVASTGDGKPKLLDEKQTTIYKKDESVNY-QLKMKASRFIISEIKQNFPRM 274
Query: 440 AFCKRWLERAGA 475
F R LE A
Sbjct: 275 PFTARSLEEKRA 286
>At3g51800.1 68416.m05680 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 392
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 266 EENEIYAIETFGSTGRG--QVHDDMDCSHYMKNFDQQFVPLRLQSSKQLLNVINKNFGTL 439
EENE+YAI+ STG G ++ D+ + Y K+ + L++++S+ +++ I +NF +
Sbjct: 216 EENEVYAIDIVASTGDGKPKLLDEKQTTIYKKDESVNY-QLKMKASRFIISEIKQNFPRM 274
Query: 440 AFCKRWLERAGA 475
F R LE A
Sbjct: 275 PFTARSLEEKRA 286
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 524 TPTRPSATSRGATPHSSNTPSC----SDPPARSRVPWR*LLTSDPTNLLNATSYSSTRVN 691
+PTR + SRG +P SC S PP+R P R T+ T TS S +
Sbjct: 359 SPTRGLSPSRGLSPSRGTNTSCFARPSTPPSRGISPSRIRQTTTSTQSSTTTSVLSFITD 418
Query: 692 PNSGQ 706
G+
Sbjct: 419 VKKGK 423
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 524 TPTRPSATSRGATPHSSNTPSC----SDPPARSRVPWR*LLTSDPTNLLNATSYSSTRVN 691
+PTR + SRG +P SC S PP+R P R T+ T TS S +
Sbjct: 359 SPTRGLSPSRGLSPSRGTNTSCFARPSTPPSRGISPSRIRQTTTSTQSSTTTSVLSFITD 418
Query: 692 PNSGQ 706
G+
Sbjct: 419 VKKGK 423
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 352 EKLRSAICSVEIAIVETASE-RDQQELWYTRVLQALAGTRRGLSLR 486
EKL+ + S+EI I ETA E + + R+ QALA + L+
Sbjct: 980 EKLKGMVSSLEIKIDETAKELHETARISQDRLKQALAAESKVAKLK 1025
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,774,387
Number of Sequences: 28952
Number of extensions: 349686
Number of successful extensions: 1039
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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