Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00879
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.8  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   7.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 28  ILWLSFFFNFSL 63
           +LW+SFF NF L
Sbjct: 143 LLWISFFLNFML 154


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 114 VEMIGDLADFDDVSDVILIPPKKGIKNHALDSLSMIVLD 230
           +E +  L  +DD+ D +L+P    I +        I LD
Sbjct: 178 LETLNQLIIYDDLRDQLLMPNDVSITDEPAYQYRGIALD 216


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 452 RHCPKYFETDVNFCTQDMCSGTSLIM 375
           RH P    T+ + C++   +G+  IM
Sbjct: 65  RHLPDALHTECSKCSETQKNGSKKIM 90


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 452 RHCPKYFETDVNFCTQDMCSGTSLIM 375
           ++ P   ETD + C++    G+  IM
Sbjct: 67  KNMPDAIETDCSKCSEKQKEGSDFIM 92


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -3

Query: 431 ETDVNFCTQDMCSGTSLIMCD*QFSPSHLN 342
           E D+N C  + CS    + C    +  H N
Sbjct: 296 EGDINECLSNPCSNAGTLDCVQLVNDYHCN 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,049
Number of Sequences: 336
Number of extensions: 3758
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)