Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00878
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.87 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.1  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 514 SVFTKIDFWLCK-IEINRIVVGYTF 585
           ++FT IDF LCK I ++ I +  TF
Sbjct: 76  AIFTVIDFSLCKAILVHAITIRSTF 100


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 643 HEVNSANDNVLKKQSYN*YEMYNQPRFD*FRFYITKNR 530
           H  +SA  N   +Q+Y  Y+     +   F  Y+T+ R
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEKEFHFNKYLTRRR 212


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 643 HEVNSANDNVLKKQSYN*YEMYNQPRFD*FRFYITKNR 530
           H  +SA  N   +Q+Y  Y+     +   F  Y+T+ R
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEKEFHFNKYLTRRR 212


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 627 QMIMFSRNKVTIDMKCITNH 568
           + I F R  +  D+KC++N+
Sbjct: 464 KFIEFIRKVLEFDVKCVSNY 483


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 643 HEVNSANDNVLKKQSYN*YEMYNQPRFD*FRFYITKNR 530
           H  +SA  N   +Q+Y  Y+     +   F  Y+T+ R
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEKEFHFNKYLTRRR 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,255
Number of Sequences: 336
Number of extensions: 4037
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)