Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00877
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.2  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 287 NRTNMPSHELRYVSRCYGDRSVSVNLXXXXXXXXIKHETHATRKTNEHMKNFK-ISRTKK 111
           NR  + S  LRY +   GD + S+           KH  + T ++ E + N   + R KK
Sbjct: 444 NRAKL-SELLRYHTSASGDEACSLKDYVSRIKPNQKHIYYITGESKEQVANSSFVERVKK 502


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 599 YLYNKQLSLFTNK*YH*IYKNPYPRK 522
           YLY +Q S  T       Y+ PYPR+
Sbjct: 23  YLYWQQTSNLTTSKLLYTYRQPYPRQ 48


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 365 TFRGAILKFYSLKRIIIFHMVFLFKHYMF*RERFMRNLGGPILYNYPFL 511
           TF   +L  + +  ++I   +F F   +   E +  +L  PIL N  F+
Sbjct: 522 TFGIVLLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFV 570


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 365 TFRGAILKFYSLKRIIIFHMVFLFKHYMF*RERFMRNLGGPILYNYPFL 511
           TF   +L  + +  ++I   +F F   +   E +  +L  PIL N  F+
Sbjct: 247 TFGIVLLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFV 295


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +1

Query: 19  SIHLSYISCPVRSLTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRVACV 174
           ++HL  + C +    Y+H      F+I  ++ L L  + +F C+L++ + C+
Sbjct: 249 TVHLLLLVC-IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALII-LLCI 298


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 58  LTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRV 165
           + YI   E ET   G +   VLE++    CS   RV
Sbjct: 249 IPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRV 284


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 704 ILPVVICLSQRLSHACLS 757
           I P VI    R+SH C+S
Sbjct: 71  IRPCVISRQLRVSHGCVS 88


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 307 NETIKRTNAPVRSVVYVILYV 369
           +ET    N  V+  VYVILY+
Sbjct: 127 HETNLLRNVSVQFFVYVILYI 147


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 307 NETIKRTNAPVRSVVYVILYV 369
           +ET    N  V+  VYVILY+
Sbjct: 127 HETNLLRNVSVQFFVYVILYI 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,018
Number of Sequences: 336
Number of extensions: 3156
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)