Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00875
(763 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03851-1|AAC00534.1| 284|Homo sapiens capping protein alpha pro... 134 3e-31
U03269-1|AAA88848.1| 286|Homo sapiens actin capping protein alp... 134 3e-31
BT006735-1|AAP35381.1| 286|Homo sapiens capping protein (actin ... 134 3e-31
BC005338-1|AAH05338.1| 286|Homo sapiens capping protein (actin ... 134 3e-31
AK223004-1|BAD96724.1| 286|Homo sapiens capping protein (actin ... 134 3e-31
AK222989-1|BAD96709.1| 286|Homo sapiens capping protein (actin ... 134 3e-31
AC002543-2|AAC60382.1| 286|Homo sapiens unknown protein. 134 3e-31
U56637-1|AAC00533.1| 286|Homo sapiens capping protein alpha sub... 133 8e-31
CR541819-1|CAG46618.1| 286|Homo sapiens CAPZA1 protein. 133 8e-31
CR407657-1|CAG28585.1| 286|Homo sapiens CAPZA1 protein. 133 8e-31
BT019364-1|AAV38171.1| 286|Homo sapiens capping protein (actin ... 133 8e-31
BC000144-1|AAH00144.1| 286|Homo sapiens capping protein (actin ... 133 8e-31
AL929470-7|CAI16528.1| 286|Homo sapiens capping protein (actin ... 133 8e-31
AL603832-1|CAI14054.1| 286|Homo sapiens capping protein (actin ... 133 8e-31
AK223226-1|BAD96946.1| 286|Homo sapiens F-actin capping protein... 133 8e-31
BC016745-1|AAH16745.1| 299|Homo sapiens capping protein (actin ... 63 9e-10
AK058174-1|BAB71703.1| 299|Homo sapiens protein ( Homo sapiens ... 63 9e-10
AB053259-1|BAB61901.1| 299|Homo sapiens male germ cell-specific... 63 9e-10
AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein pr... 33 1.1
AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open readi... 33 1.1
AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens ... 33 1.1
AK093206-1|BAC04096.1| 586|Homo sapiens protein ( Homo sapiens ... 33 1.1
EF560742-1|ABQ59052.1| 597|Homo sapiens FRMD3 protein protein. 30 7.8
BC037253-1|AAH37253.1| 362|Homo sapiens FRMD3 protein protein. 30 7.8
AL450026-2|CAM19644.1| 597|Homo sapiens FERM domain containing ... 30 7.8
AL450026-1|CAM19643.1| 556|Homo sapiens FERM domain containing ... 30 7.8
AL161786-4|CAM17460.1| 597|Homo sapiens FERM domain containing ... 30 7.8
AL161786-3|CAH72750.2| 556|Homo sapiens FERM domain containing ... 30 7.8
AL161786-2|CAH72749.1| 362|Homo sapiens FERM domain containing ... 30 7.8
AL137847-4|CAM19673.1| 597|Homo sapiens FERM domain containing ... 30 7.8
AL137847-3|CAI40735.2| 556|Homo sapiens FERM domain containing ... 30 7.8
AL137847-2|CAI40734.1| 362|Homo sapiens FERM domain containing ... 30 7.8
AK223597-1|BAD97317.1| 581|Homo sapiens FERM domain containing ... 30 7.8
AK094281-1|BAC04321.1| 460|Homo sapiens protein ( Homo sapiens ... 30 7.8
>U03851-1|AAC00534.1| 284|Homo sapiens capping protein alpha
protein.
Length = 284
Score = 134 bits (324), Expect = 3e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+I+ L S EV TAKEF+++V AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 196 YYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKA 255
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 256 LRRQLPVTRTKIDWNKILSYKIGKE 280
Score = 97.1 bits (231), Expect = 6e-20
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AAEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWR 185
A E WR +++ L AYV HY +G V G+ +D G ++ACIE HQFQ KN+WNGRWR
Sbjct: 114 AVESWRTSVETALRAYVKEHYPNGVCTVYGKKID-GQQTIIACIESHQFQAKNFWNGRWR 172
Query: 186 SVWSLTVGGPATELRGTLRVQVH 254
S W T+ T++ G L++QVH
Sbjct: 173 SEWKFTITPSTTQVVGILKIQVH 195
>U03269-1|AAA88848.1| 286|Homo sapiens actin capping protein alpha
subunit protein.
Length = 286
Score = 134 bits (324), Expect = 3e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+I+ L S EV TAKEF+++V AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 97.1 bits (231), Expect = 6e-20
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AAEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWR 185
A E WR +++ L AYV HY +G V G+ +D G ++ACIE HQFQ KN+WNGRWR
Sbjct: 116 AVESWRTSVETALRAYVKEHYPNGVCTVYGKKID-GQQTIIACIESHQFQAKNFWNGRWR 174
Query: 186 SVWSLTVGGPATELRGTLRVQVH 254
S W T+ T++ G L++QVH
Sbjct: 175 SEWKFTITPSTTQVVGILKIQVH 197
>BT006735-1|AAP35381.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 2 protein.
Length = 286
Score = 134 bits (324), Expect = 3e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+I+ L S EV TAKEF+++V AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 97.1 bits (231), Expect = 6e-20
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AAEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWR 185
A E WR +++ L AYV HY +G V G+ +D G ++ACIE HQFQ KN+WNGRWR
Sbjct: 116 AVESWRTSVETALRAYVKEHYPNGVCTVYGKKID-GQQTIIACIESHQFQAKNFWNGRWR 174
Query: 186 SVWSLTVGGPATELRGTLRVQVH 254
S W T+ T++ G L++QVH
Sbjct: 175 SEWKFTITPSTTQVVGILKIQVH 197
>BC005338-1|AAH05338.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 2 protein.
Length = 286
Score = 134 bits (324), Expect = 3e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+I+ L S EV TAKEF+++V AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 97.1 bits (231), Expect = 6e-20
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AAEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWR 185
A E WR +++ L AYV HY +G V G+ +D G ++ACIE HQFQ KN+WNGRWR
Sbjct: 116 AVESWRTSVETALRAYVKEHYPNGVCTVYGKKID-GQQTIIACIESHQFQAKNFWNGRWR 174
Query: 186 SVWSLTVGGPATELRGTLRVQVH 254
S W T+ T++ G L++QVH
Sbjct: 175 SEWKFTITPSTTQVVGILKIQVH 197
>AK223004-1|BAD96724.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 2 variant protein.
Length = 286
Score = 134 bits (324), Expect = 3e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+I+ L S EV TAKEF+++V AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 97.1 bits (231), Expect = 6e-20
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AAEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWR 185
A E WR +++ L AYV HY +G V G+ +D G ++ACIE HQFQ KN+WNGRWR
Sbjct: 116 AVESWRTSVETALRAYVKEHYPNGVCTVYGKKID-GQQTIIACIESHQFQAKNFWNGRWR 174
Query: 186 SVWSLTVGGPATELRGTLRVQVH 254
S W T+ T++ G L++QVH
Sbjct: 175 SEWKFTITPSTTQVVGILKIQVH 197
>AK222989-1|BAD96709.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 2 variant protein.
Length = 286
Score = 134 bits (324), Expect = 3e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+I+ L S EV TAKEF+++V AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 97.1 bits (231), Expect = 6e-20
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AAEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWR 185
A E WR +++ L AYV HY +G V G+ +D G ++ACIE HQFQ KN+WNGRWR
Sbjct: 116 AVESWRTSVETALRAYVKEHYPNGVCTVYGKKID-GQQTIIACIESHQFQAKNFWNGRWR 174
Query: 186 SVWSLTVGGPATELRGTLRVQVH 254
S W T+ T++ G L++QVH
Sbjct: 175 SEWKFTITPSTTQVVGILKIQVH 197
>AC002543-2|AAC60382.1| 286|Homo sapiens unknown protein.
Length = 286
Score = 134 bits (324), Expect = 3e-31
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+I+ L S EV TAKEF+++V AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 97.1 bits (231), Expect = 6e-20
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AAEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWR 185
A E WR +++ L AYV HY +G V G+ +D G ++ACIE HQFQ KN+WNGRWR
Sbjct: 116 AVESWRTSVETALRAYVKEHYPNGVCTVYGKKID-GQQTIIACIESHQFQAKNFWNGRWR 174
Query: 186 SVWSLTVGGPATELRGTLRVQVH 254
S W T+ T++ G L++QVH
Sbjct: 175 SEWKFTITPSTTQVVGILKIQVH 197
>U56637-1|AAC00533.1| 286|Homo sapiens capping protein alpha
subunit isoform 1 protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 98.7 bits (235), Expect = 2e-20
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G L++QVH
Sbjct: 179 FTITPPTAQVVGVLKIQVH 197
>CR541819-1|CAG46618.1| 286|Homo sapiens CAPZA1 protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 98.7 bits (235), Expect = 2e-20
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G L++QVH
Sbjct: 179 FTITPPTAQVVGVLKIQVH 197
>CR407657-1|CAG28585.1| 286|Homo sapiens CAPZA1 protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 98.7 bits (235), Expect = 2e-20
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G L++QVH
Sbjct: 179 FTITPPTAQVVGVLKIQVH 197
>BT019364-1|AAV38171.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 1 protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 98.7 bits (235), Expect = 2e-20
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G L++QVH
Sbjct: 179 FTITPPTAQVVGVLKIQVH 197
>BC000144-1|AAH00144.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 1 protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 98.7 bits (235), Expect = 2e-20
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G L++QVH
Sbjct: 179 FTITPPTAQVVGVLKIQVH 197
>AL929470-7|CAI16528.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 1 protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 98.7 bits (235), Expect = 2e-20
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G L++QVH
Sbjct: 179 FTITPPTAQVVGVLKIQVH 197
>AL603832-1|CAI14054.1| 286|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 1 protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 98.7 bits (235), Expect = 2e-20
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G L++QVH
Sbjct: 179 FTITPPTAQVVGVLKIQVH 197
>AK223226-1|BAD96946.1| 286|Homo sapiens F-actin capping protein
alpha-1 subunit variant protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2
Query: 254 YYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDTTFKA 433
YYEDGNVQLVS K+++ L S E TAKEF++++ +AEN YQTAIS+NY+TMSDTTFKA
Sbjct: 198 YYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKA 257
Query: 434 LRRQLPVTRSKIDWARLVSYTIGKE 508
LRRQLPVTR+KIDW +++SY IGKE
Sbjct: 258 LRRQLPVTRTKIDWNKILSYKIGKE 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +3
Query: 18 WRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWS 197
WR + D L AYV HY +G V +T+D G ++ACIE HQFQPKN+WNGRWRS W
Sbjct: 120 WRESCDSALRAYVKDHYSNGFCTVYAKTID-GQQTIIACIESHQFQPKNFWNGRWRSEWK 178
Query: 198 LTVGGPATELRGTLRVQVH 254
T+ P ++ G ++QVH
Sbjct: 179 FTITPPTAQVVGVPKIQVH 197
>BC016745-1|AAH16745.1| 299|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 3 protein.
Length = 299
Score = 63.3 bits (147), Expect = 9e-10
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +3
Query: 9 AEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRS 188
AE R L L YV HY G ++ +TV S L+ACIEDH ++ WNG W+S
Sbjct: 114 AEYLRVVLLCALKLYVNDHYPKGNCNMLRKTVKSKEY-LIACIEDHNYETGECWNGLWKS 172
Query: 189 VWSLTVGGPATELRGTLRVQVHIMRMVMYNL*AQRKLR 302
W V T++ G + VQ H R V ++ + L+
Sbjct: 173 KWIFQVNPFLTQVTGRIFVQAHFFRCVNLHIEISKDLK 210
Score = 59.3 bits (137), Expect = 1e-08
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 221 RVTWNSTCSSSYYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDN 400
+VT + ++ N+ + SK++K L + A F RLV + EN +Q A+ +
Sbjct: 184 QVTGRIFVQAHFFRCVNLHIEISKDLKESLEIVNQAQLALSFARLVEEQENKFQAAVLEE 243
Query: 401 YKTMSDTTF-KALRRQLPVTRSKIDWARLVS 490
+ +S+ K LRR LPVTR+ IDW R++S
Sbjct: 244 LQELSNEALRKILRRDLPVTRTLIDWHRILS 274
>AK058174-1|BAB71703.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ25445 fis, clone TST08542, highly similar to Mus
musculus mRNA for gsg3. ).
Length = 299
Score = 63.3 bits (147), Expect = 9e-10
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +3
Query: 9 AEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRS 188
AE R L L YV HY G ++ +TV S L+ACIEDH ++ WNG W+S
Sbjct: 114 AEYLRVVLLCALKLYVNDHYPKGNCNMLRKTVKSKEY-LIACIEDHNYETGECWNGLWKS 172
Query: 189 VWSLTVGGPATELRGTLRVQVHIMRMVMYNL*AQRKLR 302
W V T++ G + VQ H R V ++ + L+
Sbjct: 173 KWIFQVNPFLTQVTGRIFVQAHFFRCVNLHIEISKDLK 210
Score = 59.3 bits (137), Expect = 1e-08
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 221 RVTWNSTCSSSYYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDN 400
+VT + ++ N+ + SK++K L + A F RLV + EN +Q A+ +
Sbjct: 184 QVTGRIFVQAHFFRCVNLHIEISKDLKESLEIVNQAQLALSFARLVEEQENKFQAAVLEE 243
Query: 401 YKTMSDTTF-KALRRQLPVTRSKIDWARLVS 490
+ +S+ K LRR LPVTR+ IDW R++S
Sbjct: 244 LQELSNEALRKILRRDLPVTRTLIDWHRILS 274
>AB053259-1|BAB61901.1| 299|Homo sapiens male germ cell-specific
actin capping protein alpha3 protein.
Length = 299
Score = 63.3 bits (147), Expect = 9e-10
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +3
Query: 9 AEPWRAALDEELTAYVAAHYKHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRS 188
AE R L L YV HY G ++ +TV S L+ACIEDH ++ WNG W+S
Sbjct: 114 AEYLRVVLLCALKLYVNDHYPKGNCNMLRKTVKSKEY-LIACIEDHNYETGECWNGLWKS 172
Query: 189 VWSLTVGGPATELRGTLRVQVHIMRMVMYNL*AQRKLR 302
W V T++ G + VQ H R V ++ + L+
Sbjct: 173 KWIFQVNPFLTQVTGRIFVQAHFFRCVNLHIEISKDLK 210
Score = 59.3 bits (137), Expect = 1e-08
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 221 RVTWNSTCSSSYYEDGNVQLVSSKEIKAPLVASGEVATAKEFVRLVSDAENTYQTAISDN 400
+VT + ++ N+ + SK++K L + A F RLV + EN +Q A+ +
Sbjct: 184 QVTGRIFVQAHFFRCVNLHIEISKDLKESLEIVNQAQLALSFARLVEEQENKFQAAVLEE 243
Query: 401 YKTMSDTTF-KALRRQLPVTRSKIDWARLVS 490
+ +S+ K LRR LPVTR+ IDW R++S
Sbjct: 244 LQELSNEALRKILRRDLPVTRTLIDWHRILS 274
>AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein
protein.
Length = 1097
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = -2
Query: 225 TLWQARRPSKTTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTP 46
T+W +R PS ++ +S G+ P V S+L P HH Q TP
Sbjct: 106 TVWVSRNPSSQNAHSVPLDKASTSLPGE-----PEVEASSQLSQAPPQPHHMAQPQHFTP 160
Query: 45 LAPHQVPPAKAQ 10
P PP A+
Sbjct: 161 AWPQSQPPPLAE 172
>AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open reading
frame 79 protein.
Length = 1445
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = -2
Query: 225 TLWQARRPSKTTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTP 46
T+W +R PS ++ +S G+ P V S+L P HH Q TP
Sbjct: 454 TVWVSRNPSSQNAHSVPLDKASTSLPGE-----PEVEASSQLSQAPPQPHHMAQPQHFTP 508
Query: 45 LAPHQVPPAKAQ 10
P PP A+
Sbjct: 509 AWPQSQPPPLAE 520
>AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens
cDNA FLJ43857 fis, clone TESTI4007239. ).
Length = 1445
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = -2
Query: 225 TLWQARRPSKTTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTP 46
T+W +R PS ++ +S G+ P V S+L P HH Q TP
Sbjct: 454 TVWVSRNPSSQNAHSVPLDKASTSLPGE-----PEVEASSQLSQAPPQPHHMAQPQHFTP 508
Query: 45 LAPHQVPPAKAQ 10
P PP A+
Sbjct: 509 AWPQSQPPPLAE 520
>AK093206-1|BAC04096.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ35887 fis, clone TESTI2009097. ).
Length = 586
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = -2
Query: 225 TLWQARRPSKTTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTP 46
T+W +R PS ++ +S G+ P V S+L P HH Q TP
Sbjct: 106 TVWVSRNPSSQNAHSVPLDKASTSLPGE-----PEVEASSQLSQAPPQPHHMAQPQHFTP 160
Query: 45 LAPHQVPPAKAQ 10
P PP A+
Sbjct: 161 AWPQSQPPPLAE 172
>EF560742-1|ABQ59052.1| 597|Homo sapiens FRMD3 protein protein.
Length = 597
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 228 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 287
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 288 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 322
>BC037253-1|AAH37253.1| 362|Homo sapiens FRMD3 protein protein.
Length = 362
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 34 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 93
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 94 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 128
>AL450026-2|CAM19644.1| 597|Homo sapiens FERM domain containing 3
protein.
Length = 597
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 228 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 287
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 288 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 322
>AL450026-1|CAM19643.1| 556|Homo sapiens FERM domain containing 3
protein.
Length = 556
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 228 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 287
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 288 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 322
>AL161786-4|CAM17460.1| 597|Homo sapiens FERM domain containing 3
protein.
Length = 597
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 228 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 287
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 288 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 322
>AL161786-3|CAH72750.2| 556|Homo sapiens FERM domain containing 3
protein.
Length = 556
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 228 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 287
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 288 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 322
>AL161786-2|CAH72749.1| 362|Homo sapiens FERM domain containing 3
protein.
Length = 362
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 34 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 93
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 94 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 128
>AL137847-4|CAM19673.1| 597|Homo sapiens FERM domain containing 3
protein.
Length = 597
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 228 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 287
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 288 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 322
>AL137847-3|CAI40735.2| 556|Homo sapiens FERM domain containing 3
protein.
Length = 556
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 228 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 287
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 288 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 322
>AL137847-2|CAI40734.1| 362|Homo sapiens FERM domain containing 3
protein.
Length = 362
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 34 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 93
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 94 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 128
>AK223597-1|BAD97317.1| 581|Homo sapiens FERM domain containing 3
variant protein.
Length = 581
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 212 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 271
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 272 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 306
>AK094281-1|BAC04321.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ36962 fis, clone BRACE2005937, weakly similar to
PROTEIN 4.1. ).
Length = 460
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 140 RSPVSTQELLERSVAFGVVFDGRRACHRVTWNSTCSSSYYEDGNVQLVSSKEIKAPLV-A 316
+ T L + A VVF G + H + W C + + + KE KA L
Sbjct: 132 KDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGTQKEKKAMLAFH 191
Query: 317 SGEVATAKEFVRLVSDAENTYQTAISDNYKTMSDT 421
+ A K + + + Y+ A S KT+S +
Sbjct: 192 TSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSS 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,027,922
Number of Sequences: 237096
Number of extensions: 2284061
Number of successful extensions: 8383
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 8153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8368
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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