Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00873
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    56   1e-09
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    55   2e-09
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    54   3e-09
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   4.1  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.2  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.6  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 55.6 bits (128), Expect = 1e-09
 Identities = 31/69 (44%), Positives = 42/69 (60%)
 Frame = +1

Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
           +RRL  A L  + PV  P LT AH+ AR+ FA  ++  + E WR++ +SDES+    GSD
Sbjct: 15  QRRLVSAGLLARVPVKVPNLTPAHKNARVLFAIEHMFFDEEDWRRVLWSDESKFNRQGSD 74

Query: 436 RRGWVYRRP 462
            R  V RRP
Sbjct: 75  GRRLV-RRP 82


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 32/88 (36%), Positives = 47/88 (53%)
 Frame = +1

Query: 259 RRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSDR 438
           RRL  A    +RP    KL   H +AR++FA  +L   +  W +I FSDESR+ L GSD 
Sbjct: 24  RRLHAAGFCARRPRKVRKLLPHHVEARIRFAEEHLAASIFWWSKIIFSDESRINLDGSDG 83

Query: 439 RGWVYRRPGERFAQCCFAETVAYGSALV 522
             +V+R P + +      +T+ +G   V
Sbjct: 84  TKYVWRLPNQAYHPKNTIKTLKHGGGHV 111


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 54.4 bits (125), Expect = 3e-09
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = +1

Query: 259 RRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSDR 438
           RRL  A    +RP    KL   H +AR++FA  +L   +  W +I FSDESR+ L GSD 
Sbjct: 96  RRLHAAGFCARRPRKVRKLQHHHVEARIRFAEEHLAASIFWWSKIIFSDESRINLDGSDG 155

Query: 439 RGWVYRRPGERFAQCCFAETVAYGSALV 522
             +V+R P + +      +T+++G   V
Sbjct: 156 IKYVWRFPNQAYHPKNTIKTLSHGGGHV 183


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -1

Query: 665 HRHIPHRERHVPAQYWKCTRPKLTAPSSPA 576
           H H+PH ++H P+ +     P    P++ A
Sbjct: 125 HPHLPHVQQHHPSVHHPAHHPLHYQPAAAA 154


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 579 RQARKQARFYRRRKCRPTSYKSRP 508
           R+ R+     RRR+CRP + ++ P
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPP 515


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 230 YEHLGAPVGRRHQVN 186
           + HLG P  + HQ+N
Sbjct: 360 HAHLGVPTSQHHQLN 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,587
Number of Sequences: 2352
Number of extensions: 18086
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)