Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00873
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 64 7e-11
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 64 7e-11
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 64 7e-11
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 64 7e-11
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 64 7e-11
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AC103567-10|AAL35727.1| 159|Caenorhabditis elegans Hypothetical... 42 6e-04
Z54235-5|CAA90976.2| 202|Caenorhabditis elegans Hypothetical pr... 37 0.013
U53336-9|AAA96181.1| 257|Caenorhabditis elegans Pax (paired box... 36 0.039
U40955-1|AAA81747.3| 233|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z70718-7|CAA94671.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.12
U50072-5|AAA93452.2| 351|Caenorhabditis elegans Pax (paired box... 34 0.12
U23518-3|AAC70885.1| 109|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF002702-1|AAC27976.1| 289|Caenorhabditis elegans PAX protein p... 34 0.12
Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z48582-7|CAA88468.2| 308|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF106581-6|ABC48242.1| 386|Caenorhabditis elegans Hypothetical ... 31 1.1
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 30 1.5
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 30 1.5
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 29 2.5
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 3.4
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 7.8
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 28 7.8
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
RRRL+QA L ++PV P ++ +R AR+ +A+ +L ++W + +SDES+ L GSD
Sbjct: 38 RRRLQQAGLHGRKPVKKPFISKKNRMARVAWAKAHLRWGRQEWAKHIWSDESKFNLFGSD 97
Query: 436 RRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPST 549
WV R G R++ TV +G V F ST
Sbjct: 98 GNSWVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTST 135
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
RRRL+QA L ++PV P ++ +R AR+ +A+ +L ++W + +SDES+ L GSD
Sbjct: 108 RRRLQQAGLHGRKPVKKPFISKKNRMARVAWAKAHLRWGRQEWAKHIWSDESKFNLFGSD 167
Query: 436 RRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPST 549
WV R G R++ TV +G V F ST
Sbjct: 168 GNSWVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTST 205
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
RRRL+QA L ++PV P ++ +R AR+ +A+ +L ++W + +SDES+ L GSD
Sbjct: 38 RRRLQQAGLHGRKPVKKPFISKKNRMARVAWAKAHLRWGRQEWAKHIWSDESKFNLFGSD 97
Query: 436 RRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPST 549
WV R G R++ TV +G V F ST
Sbjct: 98 GNSWVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTST 135
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
RRRL+QA L ++PV P ++ +R AR+ +A+ +L ++W + +SDES+ L GSD
Sbjct: 38 RRRLQQAGLHGRKPVKKPFISKKNRMARVAWAKAHLRWGRQEWAKHIWSDESKFNLFGSD 97
Query: 436 RRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPST 549
WV R G R++ TV +G V F ST
Sbjct: 98 GNSWVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTST 135
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
RRRL+QA L ++PV P ++ +R AR+ +A+ +L ++W + +SDES+ L GSD
Sbjct: 108 RRRLQQAGLHGRKPVKKPFISKKNRMARVAWAKAHLRWGRQEWAKHIWSDESKFNLFGSD 167
Query: 436 RRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPST 549
WV R G R++ TV +G V F ST
Sbjct: 168 GNSWVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTST 205
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/98 (35%), Positives = 54/98 (55%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
RRRL+QA L ++PV P ++ +R AR+ +A+ +L ++W + +SDES+ L GSD
Sbjct: 79 RRRLQQAGLHGRKPVKKPFISKKNRMARVAWAKAHLRWGRQEWAKHIWSDESKFNLFGSD 138
Query: 436 RRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPST 549
W+ R G R++ TV +G V F ST
Sbjct: 139 GNSWLRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTST 176
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/98 (35%), Positives = 53/98 (54%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVTGPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGSD 435
RRRL+QA L ++PV P ++ +R AR+ +A+ +L ++W + +SDES+ L G D
Sbjct: 108 RRRLQQAGLHGRKPVKKPFISKKNRMARVAWAKAHLRWGRQEWAKHIWSDESKFNLFGGD 167
Query: 436 RRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPST 549
WV R G R++ TV +G V F ST
Sbjct: 168 GNSWVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTST 205
>AC103567-10|AAL35727.1| 159|Caenorhabditis elegans Hypothetical
protein Y51F10.1 protein.
Length = 159
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 RRRLKQANLTPKRPVT-GPKLTVAHRQARLQFARTNLN*EVEQWRQIQFSDESRMCLHGS 432
RR L ++ +R + P +T HRQ R+QFA+ N + WRQI FSDE + G
Sbjct: 97 RRVLSKSQFIKRRKLRKAPFITEKHRQNRIQFAKIN---QRTNWRQIIFSDEKKFNCDGP 153
Query: 433 D 435
D
Sbjct: 154 D 154
>Z54235-5|CAA90976.2| 202|Caenorhabditis elegans Hypothetical
protein C09G9.7 protein.
Length = 202
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGSFI 103
+A++L I+HSCVSKV +R+ ETG +
Sbjct: 113 IAKQLGITHSCVSKVLRRYAETGEIV 138
>U53336-9|AAA96181.1| 257|Caenorhabditis elegans Pax (paired box)
transcriptionfactor protein 1 protein.
Length = 257
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGSFI 103
++R+L+ISH CVSK+ RF E G+ +
Sbjct: 99 ISRQLKISHGCVSKILTRFSENGTIM 124
>U40955-1|AAA81747.3| 233|Caenorhabditis elegans Hypothetical
protein F48B9.5 protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.039
Identities = 12/24 (50%), Positives = 21/24 (87%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
+++RL ++HSCVSK+ R+++TGS
Sbjct: 135 ISKRLCVTHSCVSKILNRYRQTGS 158
>Z70718-7|CAA94671.1| 289|Caenorhabditis elegans Hypothetical
protein C04G2.7 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
++R+L++SH CVSK+ R+ TGS
Sbjct: 67 ISRQLKVSHGCVSKILGRYYSTGS 90
>U50072-5|AAA93452.2| 351|Caenorhabditis elegans Pax (paired box)
transcriptionfactor protein 2 protein.
Length = 351
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
++R+L++SH CVSK+ R+ TGS
Sbjct: 129 ISRQLKVSHGCVSKILGRYYSTGS 152
>U23518-3|AAC70885.1| 109|Caenorhabditis elegans Hypothetical
protein F21D12.5 protein.
Length = 109
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
+AR + ++HSCVSK+ R++ TGS
Sbjct: 45 IARLIGVTHSCVSKIMSRYRRTGS 68
>AF002702-1|AAC27976.1| 289|Caenorhabditis elegans PAX protein
protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
++R+L++SH CVSK+ R+ TGS
Sbjct: 67 ISRQLKVSHGCVSKILGRYYSTGS 90
>Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
++R+L++SH VSK+ R+ ETGS
Sbjct: 51 ISRQLKVSHGAVSKILNRYAETGS 74
>Z48582-7|CAA88468.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
++R+L++SH VSK+ R+ ETGS
Sbjct: 51 ISRQLKVSHGAVSKILNRYAETGS 74
>Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical
protein R13.2 protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETG 94
+++ L ISH CVSK+ RF+ TG
Sbjct: 116 ISKSLCISHGCVSKIISRFRATG 138
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/44 (27%), Positives = 31/44 (70%)
Frame = -3
Query: 642 TTCSSTILEMYPSEVDRPLVPRQARKQARFYRRRKCRPTSYKSR 511
T+ ++ ++ Y +EV+R + PRQ ++Q + ++RR+ + T+ +++
Sbjct: 322 TSNNNDAVDDYEAEVERHVTPRQQQQQQQPFQRRRWQKTNQQNQ 365
>AF106581-6|ABC48242.1| 386|Caenorhabditis elegans Hypothetical
protein VC5.6 protein.
Length = 386
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 555 FYRRRKCRPTSYKSRPISHCFSE--TALRKSLPRPPVDPTSSV 433
+Y R C PTSY +S FS RK+L P +D S+
Sbjct: 236 YYTRHLCTPTSYSLDEVSRIFSPYWADFRKTLVDPVIDAKLSI 278
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
++R LQ+S+ CVSK+ R+ E+G+
Sbjct: 43 ISRLLQVSNGCVSKILCRYYESGT 66
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 26 VARRLQISHSCVSKVCKRFQETGS 97
++R LQ+S+ CVSK+ R+ E+G+
Sbjct: 43 ISRLLQVSNGCVSKILCRYYESGT 66
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 11 LSQRIVARRLQISHSCVSKVCKRFQETGSF 100
++ + +ARRL++S VS RF+E G+F
Sbjct: 139 VAAKSIARRLKVSEKLVSTTIARFKELGNF 168
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 522 MMWAGISFDGKTELVFVP 575
M++AGI+ +GKT L+FVP
Sbjct: 257 MVFAGITANGKTPLIFVP 274
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = +1
Query: 418 CLHGSDRRGWVYRRPGERFAQCCFAETVAYGSALV*CGPAFPSTVKPSLFSCLAGDEGAV 597
C+ + + + R+P CC + T + CGP + + C
Sbjct: 748 CMGSATKTDYCSRKPCATGTACCNSLTAQTVDGVSICGPVEAAEDETDPVPCTTTTPACC 807
Query: 598 NFGRVHFQYCAG-TCRSLCGIC 660
G V ++ +G C CG C
Sbjct: 808 VLGGVWSEWSSGDACNDTCGNC 829
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 206 QQELRDVRRVAASK*TVVDDSSKRI*LQKGLSQARNSR*LIDKHAFNLLVP--ILIERLS 379
+Q VR VAAS+ V + I K L R ++DK+A+ + P I+I LS
Sbjct: 116 EQSTLIVREVAASRIVVRLRNRTEIGRAKYLFMFNYCRKIVDKNAYEIQYPDDIMIIELS 175
Query: 380 NGGKSSSPTRAGCV 421
+ SS + CV
Sbjct: 176 EDVEYSSELKPVCV 189
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 8 ELSQRIVARRLQISHSCVSKVCKRFQETGSF 100
EL ++ L ISH+C ++ K+F +T +
Sbjct: 144 ELRDKVNIPVLMISHACKEEIAKKFSDTAGY 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,456,895
Number of Sequences: 27780
Number of extensions: 391533
Number of successful extensions: 1148
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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