Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00872
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.6  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 226 NNNHILNEGSHFSNASLETRRPMDLL 149
           +NN I     HFS++S  +R+ + +L
Sbjct: 245 SNNVIAERKKHFSSSSYSSRKRLAML 270


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 226 NNNHILNEGSHFSNASLETRRPMDLL 149
           +NN I     HFS++S  +R+ + +L
Sbjct: 245 SNNVIAERKKHFSSSSYSSRKRLAML 270


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 535 IWWFNQFFQILLSVA 491
           IW FN  F +LLS A
Sbjct: 226 IWVFNDVFVMLLSTA 240


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 535 IWWFNQFFQILLSVA 491
           IW FN  F +LLS A
Sbjct: 226 IWVFNDVFVMLLSTA 240


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 535 IWWFNQFFQILLSVA 491
           IW FN  F +LLS A
Sbjct: 226 IWVFNDVFVMLLSTA 240


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = -3

Query: 531 GGLI-NSFKYYFPWPVGSHYLTFHPIIHTPPHNFL*LLSQCN 409
           GGL+ N   +   WP        HP+ +  P+  + L   CN
Sbjct: 130 GGLLYNERTHSCDWPENVDGCQKHPLCNDDPNGNVPLGKSCN 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,297
Number of Sequences: 336
Number of extensions: 3886
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)