Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00872
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   5.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   8.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 286 TSYQFIEEELHLLLSVSRK 342
           T YQFIEE   + LS  R+
Sbjct: 306 TVYQFIEERQRISLSKERR 324


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 286 TSYQFIEEELHLLLSVSRK 342
           T YQFIEE   + LS  R+
Sbjct: 306 TVYQFIEERQRISLSKERR 324


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 286 TSYQFIEEELHLLLSVSRK 342
           T YQFIEE   + LS  R+
Sbjct: 306 TVYQFIEERQRISLSKERR 324


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 544 NNCQYCYRKIKC 579
           +NC+Y YR  KC
Sbjct: 122 DNCEYAYRFNKC 133


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 193 SVIPRSVCDYYLEAQRASPNEYHRCWLLHIITSYQFIEEEL 315
           SVI R+V   YL+ Q    +  H C +   +    ++E EL
Sbjct: 319 SVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYLESEL 359


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 193 SVIPRSVCDYYLEAQRASPNEYHRCWLLHIITSYQFIEEEL 315
           SVI R+V   YL+ Q    +  H C +   +    ++E EL
Sbjct: 234 SVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYLESEL 274


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 193 SVIPRSVCDYYLEAQRASPNEYHRCWLLHIITSYQFIEEEL 315
           SVI R+V   YL+ Q    +  H C +   +    ++E EL
Sbjct: 553 SVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYLESEL 593


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,896
Number of Sequences: 438
Number of extensions: 4492
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)