Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00871
(812 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep: His... 104 2e-21
UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406 ... 100 9e-20
UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histo... 86 9e-16
UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Hist... 82 1e-14
UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep: His... 81 4e-14
UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268; Eukaryota|... 70 8e-11
UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histo... 69 2e-10
UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep: His... 69 2e-10
UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep: His... 67 4e-10
UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 64 3e-09
UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7; Trypanosoma... 64 4e-09
UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Re... 63 7e-09
UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n... 61 3e-08
UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179; Eukary... 61 3e-08
UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 60 5e-08
UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74; Eukaryo... 60 7e-08
UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoid... 59 1e-07
UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333, ... 56 8e-07
UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis elegan... 55 2e-06
UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2... 55 2e-06
UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep: H... 53 7e-06
UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba hist... 53 1e-05
UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma japonicum... 51 4e-05
UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family prote... 51 4e-05
UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histon... 50 5e-05
UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep... 49 1e-04
UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;... 48 3e-04
UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep: Hi... 47 5e-04
UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica ... 47 6e-04
UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium longiflorum|... 47 6e-04
UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium longiflorum|... 46 9e-04
UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, wh... 46 0.002
UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia intestinalis|... 45 0.003
UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoid... 44 0.005
UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;... 43 0.008
UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n... 43 0.008
UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla grou... 42 0.018
UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;... 42 0.024
UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole geno... 41 0.043
UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein; ... 40 0.075
UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep: H... 40 0.099
UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Hist... 37 0.53
UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein; ... 37 0.53
UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep: His... 37 0.70
UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;... 37 0.70
UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone H2... 36 1.6
UniRef50_A0P1R8 Cluster: Putative uncharacterized protein; n=4; ... 36 1.6
UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellu... 36 1.6
UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep: Pred... 35 2.1
UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; ... 34 3.7
UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.7
UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n... 34 4.9
UniRef50_UPI0000E49FF4 Cluster: PREDICTED: similar to KIAA0467 p... 33 8.6
UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila melanogast... 33 8.6
UniRef50_O44859 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep:
Histone H2AV - Homo sapiens (Human)
Length = 128
Score = 104 bits (250), Expect = 2e-21
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRIHRHLK RTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD K
Sbjct: 26 LQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 78
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +3
Query: 255 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG 395
LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG
Sbjct: 77 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG 123
>UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC564406 protein -
Strongylocentrotus purpuratus
Length = 338
Score = 99.5 bits (237), Expect = 9e-20
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +3
Query: 255 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGGPGA 407
LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKG A
Sbjct: 287 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGSQKA 337
>UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histone
H2A - Paramecium tetraurelia
Length = 183
Score = 86.2 bits (204), Expect = 9e-16
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRIHR+LK R ++ RVG T+AVY++AILEYLTAEVLELAGNASKD K
Sbjct: 78 LQFPVGRIHRYLKQRVSAKNRVGTTSAVYTSAILEYLTAEVLELAGNASKDFK 130
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 392
KV+RITPRHLQLAIRGDEELD LI+ATIAGGGVIPHIHK+L GK+
Sbjct: 130 KVRRITPRHLQLAIRGDEELDILIRATIAGGGVIPHIHKALFGKQ 174
>UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Histone
H2A.Z - Schizosaccharomyces pombe (Fission yeast)
Length = 171
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +3
Query: 231 VGGKCV*RLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLI 383
+ G LKVKRITPRHLQLAIRGDEELD+LI+ATIAGGGV+PHI+K L+
Sbjct: 107 LAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAGGGVLPHINKQLL 157
Score = 80.2 bits (189), Expect = 6e-14
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+ R LK +T ++ RVGA +AVYSAA+LEYLTAEVLELAGNA+KD K
Sbjct: 64 LQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLK 116
>UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep:
Histone H2A.Z - Saccharomyces cerevisiae (Baker's yeast)
Length = 134
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +3
Query: 231 VGGKCV*RLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 389
+ G LKVKRITPRHLQLAIRGD+ELDSLI+ATIA GGV+PHI+K+L+ K
Sbjct: 74 LAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLK 126
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R+LK T RVG+ AA+Y A+LEYLTAEVLELAGNA+KD K
Sbjct: 31 LQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLK 83
>UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268;
Eukaryota|Rep: Histone H2A type 2-A - Homo sapiens
(Human)
Length = 130
Score = 69.7 bits (163), Expect = 8e-11
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K
Sbjct: 24 LQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNK 75
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 392
K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ KK
Sbjct: 75 KKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
>UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histone
H2A - Acropora formosa (Staghorn coral)
Length = 125
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRIHR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K
Sbjct: 23 LQFPVGRIHRLLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNK 74
Score = 53.6 bits (123), Expect = 6e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 74 KKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKK 119
>UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep:
Histone H2A.x - Homo sapiens (Human)
Length = 143
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K
Sbjct: 24 LQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNK 75
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKG----GPGAP 410
K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+I L+ KK GP AP
Sbjct: 75 KKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGPKAP 130
>UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep:
Histone H2A - Drosophila melanogaster (Fruit fly)
Length = 124
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRIHR L+ + RVGA A VY AA++EYL AEVLELAGNA++D K
Sbjct: 23 LQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNK 74
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 74 KKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 119
>UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 115
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGG 398
K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH++L+ KKGG
Sbjct: 55 KKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 102
>UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7;
Trypanosomatidae|Rep: Histone H2A, putative - Leishmania
major
Length = 177
Score = 64.1 bits (149), Expect = 4e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSL 380
K +RI PRHL LAIRGDEEL+ ++KATI+ GGV+P++HK+L
Sbjct: 124 KTERIKPRHLLLAIRGDEELNQVVKATISRGGVVPNVHKAL 164
Score = 62.9 bits (146), Expect = 9e-09
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 252
L FPVGRIH LK+ R GA+AA+Y AA+LEYLT EV+EL+G A+K
Sbjct: 72 LNFPVGRIHSRLKDGLYRKQRCGASAAIYCAALLEYLTTEVIELSGAAAK 121
>UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Rep:
Histone H2A - Ostreococcus tauri
Length = 152
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNAS 249
LQFPVGR+ R+LK + RVGA A VY AA+LEYL AEVLELAGNAS
Sbjct: 41 LQFPVGRVARYLKQGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAS 88
>UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB30ED UniRef100
entry - Canis familiaris
Length = 243
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +1
Query: 109 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
FPVGR+ R++K + R+G A VY AA+LEYLTAE+LELAGNA++D K
Sbjct: 23 FPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEILELAGNAARDNK 72
>UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179;
Eukaryota|Rep: Core histone macro-H2A.1 - Homo sapiens
(Human)
Length = 372
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +1
Query: 109 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
FPVGR+ R++K + R+G A VY AA+LEYLTAE+LELAGNA++D K
Sbjct: 23 FPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEILELAGNAARDNK 72
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K R+TPRH+ LA+ DEEL+ L+K TIA GGV+P+IH L+ KK G
Sbjct: 72 KKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRG 119
>UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 158
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 398
K RI PRH+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 99 KKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 146
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEV 225
LQFPVGRI R LK + RVGA A VY AA+LEYL AEV
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEV 64
>UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 219
Score = 60.1 bits (139), Expect = 7e-08
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 254 SLDAFPANSKTSAVRYSKIAAE*TAAVAPTRPWLVVLFLRCL*ILPTGN*SPALADLET 78
SL A PANS+TSA +YSK AA+ T A P L + F + L ILPTGN PALADLET
Sbjct: 43 SLAALPANSRTSAAKYSKTAAKQTGAPVPILS-LYLPFFKNLEILPTGNQRPALADLET 100
Score = 33.1 bits (72), Expect = 8.6
Identities = 20/34 (58%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 367 MCGMTPPPAIVAF-MRLSNSSSPLIASCKCRGVI 269
M G TPP AIV M L NSSS LIA+ C G I
Sbjct: 4 MLGKTPPSAIVVLAMSLFNSSSFLIANKICLGTI 37
>UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74;
Eukaryota|Rep: Core histone macro-H2A.2 - Homo sapiens
(Human)
Length = 372
Score = 60.1 bits (139), Expect = 7e-08
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +1
Query: 109 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
FPVGR+ R+LK T + R+ A VY AA++EYL AE+LELAGNA++D K
Sbjct: 23 FPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEILELAGNAARDNK 72
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRH+ LA+ DEEL+ L+K TIA GGV+P IH L+ KK G
Sbjct: 72 KKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRG 119
>UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 143
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 2/42 (4%)
Frame = +3
Query: 261 VKRITPRHLQLAIRGDEELDSLIK--ATIAGGGVIPHIHKSL 380
V+RI+PRHL LAI+ DEELD+LI+ TIAGGGVIP+IH+ L
Sbjct: 83 VRRISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEVL 124
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLEL 234
L FPVGRIHR LKN+ RV ++VY AAILEYL +EVLEL
Sbjct: 26 LIFPVGRIHRMLKNKVPLK-RVSILSSVYLAAILEYLASEVLEL 68
>UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1333, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 195
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD 255
LQFPV RI R+LK S RVG A+VY A +LEYL EVLELA NA+ D
Sbjct: 78 LQFPVSRIDRYLKKGCYSQ-RVGTGASVYLATVLEYLATEVLELARNAAWD 127
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +3
Query: 267 RITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 132 RIIPRHVLLAVRNDEELGKLLAGVTIARGGVLPNINHILLPKK 174
>UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis
elegans|Rep: Histone H2A - Caenorhabditis elegans
Length = 145
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
L FPVGRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A+ + K
Sbjct: 36 LTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESK 88
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIP-HIHKSLIGKK 392
K R+TPRHL LAI GD+E L+ K T+ GGV P IH SL+ KK
Sbjct: 88 KKSRVTPRHLHLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLLPKK 134
>UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2A
type 1; n=2; Euarchontoglires|Rep: PREDICTED: similar to
Histone H2A type 1 - Rattus norvegicus
Length = 177
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 392
K RI PRHLQLAIR DEEL+ L+ + TIA GGV+P+I L+ KK
Sbjct: 80 KKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 125
>UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep:
Histone H2A - Tetraodon nigroviridis (Green puffer)
Length = 258
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 228 GVGGKCV*RLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 392
G G + K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 56 GAGRQRARNNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 111
>UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: histone H2A - Entamoeba
histolytica HM-1:IMSS
Length = 159
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 103 LQFPVGRIHRHLKN-RTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD 255
LQFPV RIH LK R H + A+VY A++EYL AEVLELAG +KD
Sbjct: 53 LQFPVARIHAALKKGRYGEH--INKMASVYLTAVIEYLVAEVLELAGGQAKD 102
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +3
Query: 267 RITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKG 395
RITPRH+QLA+R D EL+ L+K TI+ GGV P++ + + KG
Sbjct: 107 RITPRHIQLAVRSDLELNDLLKDVTISYGGVFPNV-PTAVNSKG 149
>UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma
japonicum|Rep: Histone H2A - Schistosoma japonicum
(Blood fluke)
Length = 156
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKG 395
K K ITPRH+ L +R D EL+ L+K I+ GGV+P IH +L+ +KG
Sbjct: 75 KRKTITPRHIMLGVRNDAELNELLKHVHISHGGVLPCIHPALLKRKG 121
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 252
L V R+HR++K + R A+VY +A++EYL AEV EL+GNA+K
Sbjct: 24 LVISVSRVHRYMKKGRYAR-RTSIAASVYMSAVIEYLVAEVNELSGNAAK 72
>UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family protein;
n=2; Tetrahymena thermophila|Rep: Core histone
H2A/H2B/H3/H4 family protein - Tetrahymena thermophila
SB210
Length = 388
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD 255
L FP GR+ R+LK + RV ++ +Y A +LEYL AEVLE AGN +K+
Sbjct: 289 LVFPCGRLRRYLK-QACKQFRVSSSCNIYLAGVLEYLAAEVLETAGNIAKN 338
>UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histone
H2A - Oryza sativa subsp. indica (Rice)
Length = 88
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +1
Query: 106 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLE 231
QFPVGRI R+LK + RVG+ A VY AA+LEYL AEVLE
Sbjct: 35 QFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLE 75
>UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep:
Histone H2A - Trypanosoma cruzi
Length = 135
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNAS 249
L FPVGR+ L+ + R+GA+ AVY AA+LEYLTAE+LEL+ A+
Sbjct: 25 LIFPVGRVGSLLRRGQYAR-RIGASGAVYMAAVLEYLTAELLELSVKAA 72
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGK 389
K KR+TPR + LA+R D++L L+K T++ GGV+P ++K+L K
Sbjct: 78 KPKRLTPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKK 122
>UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 96
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQF VG +H ++ + RVG A VY AA+LEYLTAE+LEL A D K
Sbjct: 9 LQFSVGPVHWFVRKGNYAQ-RVGGGAPVYMAAVLEYLTAEILELTDIAVHDNK 60
>UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep:
Histone H2A-Bbd - Homo sapiens (Human)
Length = 115
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD 255
L F V ++ R L+ + R+ TA VY AA++EYLTA+VLELAGN +++
Sbjct: 28 LSFSVSQVERSLREGHYAQ-RLSRTAPVYLAAVIEYLTAKVLELAGNEAQN 77
>UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
indica (Rice)
Length = 180
Score = 46.8 bits (106), Expect = 6e-04
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
K RI PRH+ LAIR D+EL L+ TIA GGV+P+I+ L+ K+
Sbjct: 90 KKNRIIPRHVLLAIRNDDELGKLLAGVTIAHGGVLPNINPVLLPKE 135
>UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium
longiflorum|Rep: Histone H2A.2 - Lilium longiflorum
(Trumpet lily)
Length = 128
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 252
LQF V R+ LK R+GATA VY AA+LE L AEVLE+A N ++
Sbjct: 24 LQFSVSRVEYSLKKGRYCR-RLGATAPVYLAAVLENLVAEVLEMAANVTE 72
Score = 37.5 bits (83), Expect = 0.40
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 270 ITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
I PRH+ LA+R D E++ L TI+ GV+P K L +K
Sbjct: 79 IKPRHIMLAVRNDVEVNKLFHGVTISASGVVPKTRKELDRRK 120
>UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium
longiflorum|Rep: Histone H2A.1 - Lilium longiflorum
(Trumpet lily)
Length = 110
Score = 46.4 bits (105), Expect = 9e-04
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD 255
LQF V R+ LK R+GATA VY AA+LE L AEVL++A N +++
Sbjct: 24 LQFSVSRVEYSLKKGRYCR-RLGATAPVYLAAVLENLVAEVLDMAANVTEE 73
>UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 494
Score = 45.6 bits (103), Expect = 0.002
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQF + I R+LK S R G +A VY AILEYL EV +LA NA+KD K
Sbjct: 419 LQFLICCIGRYLKKDCHSQ-RFGTSAQVYLTAILEYLAVEVWKLARNAAKDNK 470
>UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia
intestinalis|Rep: Histone H2A - Giardia lamblia ATCC
50803
Length = 124
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 243
+ FP+GRIHRHL+ + R+ + A VY AA+LE + AEV A N
Sbjct: 21 ISFPIGRIHRHLREGRYAE-RISSDAPVYLAAVLENVVAEVFREACN 66
>UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 154
Score = 44.0 bits (99), Expect = 0.005
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 243
+ FPV R+ R L+ + RV +TA VY AA+LEYL E+LELA N
Sbjct: 43 ITFPVSRVDRLLREGRFAP-RVESTAPVYLAAVLEYLVFEILELAHN 88
Score = 39.9 bits (89), Expect = 0.075
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGP 401
K RITP+H+ A+ D EL+SL + TIA GGV+P +S KK P
Sbjct: 94 KKTRITPQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQQSTGEKKKKP 142
>UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;
Rattus norvegicus|Rep: RIKEN cDNA 4930557A04 gene -
Rattus norvegicus
Length = 122
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 240
L FPV ++ R L+ R TS ++A V+ A +LEYLT+ +L+LAG
Sbjct: 17 LHFPVNKVERLLRERNTSKCP-NSSAPVFLAGVLEYLTSNILDLAG 61
>UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB494E UniRef100
entry - Canis familiaris
Length = 103
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 240
LQFP+ R+ R L+ +H + + V+ A+ILEYLTA +LELAG
Sbjct: 25 LQFPISRVDRLLREGHYAHC-LSLSMPVFLASILEYLTANILELAG 69
>UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla
group|Rep: Histone H2A - Homo sapiens (Human)
Length = 116
Score = 41.9 bits (94), Expect = 0.018
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGR-VGATAAVYSAAILEYLTAEVLELAGNASKD 255
LQFPV + R L R + H R + +T V+ A +LEYLTA +LE G K+
Sbjct: 23 LQFPVSHLERCL--RESQHARHLSSTTPVFLAGVLEYLTANILEKVGKEVKN 72
>UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 146
Score = 41.5 bits (93), Expect = 0.024
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNAS 249
L+F V + R L+ S RV V+ AA+LEYLTAE+LELAG+ +
Sbjct: 30 LRFSVSLVDRFLRRGRYSR-RVAEGTPVFLAAVLEYLTAELLELAGHTA 77
Score = 35.1 bits (77), Expect = 2.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 264 KRITPRHLQLAIRGDEELDSLIKATIAGGGV-IPHIHKSLI 383
+RI P HL+ A+R D ELD L ++ G +P +H +L+
Sbjct: 83 QRIAPVHLRQAVRDDPELDRLFGDIVSSPGAGLPRLHSALL 123
>UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 157
Score = 40.7 bits (91), Expect = 0.043
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 252
LQF VG+I LK+ + A VY +A LEYL EVLEL+GN ++
Sbjct: 26 LQFIVGQIAHFLKSLQVIWS-CSSNAPVYVSAFLEYLAVEVLELSGNVAR 74
>UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 260
Score = 39.9 bits (89), Expect = 0.075
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 RITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI 383
RITP+H+ L+I D EL+ L+K TIA GGV IH L+
Sbjct: 193 RITPQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILL 232
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELA 237
L FPV RI + ++ + R + A V+ AA+LEYLT E+LEL+
Sbjct: 139 LTFPVSRIEKMIREGRFTK-RCSSDAPVFLAAVLEYLTLEILELS 182
>UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep:
Histone H2A - Bos taurus (Bovine)
Length = 117
Score = 39.5 bits (88), Expect = 0.099
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 240
LQFPV R+ R L+ ++ R+ + V+ ILEYL A +L+LAG
Sbjct: 26 LQFPVSRVDRLLREGQFAN-RLSSATPVFLTGILEYLIANILDLAG 70
>UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Histone
H2A - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 713
Score = 37.1 bits (82), Expect = 0.53
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 243
L PV +IH LK ++ +VY A+LEY++A++L+LAGN
Sbjct: 103 LALPVDKIHPLLKE--VLGYKIDHQVSVYIVAVLEYISADILKLAGN 147
>UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 286
Score = 37.1 bits (82), Expect = 0.53
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 243
L V R+ + L+ R S RV T+ V+ AA+LEY+ E+LEL+ N
Sbjct: 186 LTISVSRVEKLLRGRRYSK-RVSPTSCVFLAAVLEYMVLELLELSLN 231
>UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep:
Histone H2A - Oryza sativa subsp. indica (Rice)
Length = 276
Score = 36.7 bits (81), Expect = 0.70
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE 222
LQFPVGR +LK + RVG A VY AA+LEYL AE
Sbjct: 30 LQFPVGR---YLKKGHYAQ-RVGIGAPVYLAAVLEYLAAE 65
>UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;
Eumetazoa|Rep: Histone H2A [Contains: Hipposin] -
Hippoglossus hippoglossus (Atlantic halibut)
Length = 52
Score = 36.7 bits (81), Expect = 0.70
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVY 189
LQFPVGR+HR L+ +H RVGA A VY
Sbjct: 24 LQFPVGRVHRLLRKGNYAH-RVGAGAPVY 51
>UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone
H2A-Bbd (H2A Barr body-deficient); n=2; Canis lupus
familiaris|Rep: PREDICTED: similar to Histone H2A-Bbd
(H2A Barr body-deficient) - Canis familiaris
Length = 163
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 252
L F V ++ R L+ + R+GA+A ++ AA++++LTA VL LAG+ ++
Sbjct: 76 LAFSVCQMERLLRAGRYAK-RLGASAPIFLAAVIQFLTATVLGLAGDEAR 124
>UniRef50_A0P1R8 Cluster: Putative uncharacterized protein; n=4;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 391
Score = 35.5 bits (78), Expect = 1.6
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 203 WNILQQRFWSWREMRLKIKSEAYYSSALTTCY*RR*RIGQPHKSNYRWRRRHPTHTQIS 379
W++LQ SW E+ ++ S Y + +TTC+ G KS +RWRR+ P T+I+
Sbjct: 240 WHMLQP-LDSWPELG-RLLSAIYLKTRVTTCHLPNLSSGL-RKSPFRWRRKDPFQTRIA 295
>UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellular
organisms|Rep: Son of sevenless homolog 1 - Homo sapiens
(Human)
Length = 1333
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 243
L PV +IH LK ++ +VY A+LEY++A++L+L GN
Sbjct: 103 LSLPVEKIHPLLKE--VLGYKIDHQVSVYIVAVLEYISADILKLVGN 147
>UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep:
Predicted - Mus musculus (Mouse)
Length = 109
Score = 35.1 bits (77), Expect = 2.1
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 106 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNAS 249
+ P+ + R L+ S R+ ++A + ++LEYLT+ +LELAG +
Sbjct: 20 ELPLSLVDRFLREEIHS-SRLSSSALPFLTSVLEYLTSNILELAGEVA 66
>UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; Mus
musculus|Rep: H2A histone family member - Mus musculus
Length = 115
Score = 34.3 bits (75), Expect = 3.7
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 252
L F V + +HL+ + + R+ ++ AAILE LT +LELAGN ++
Sbjct: 27 LIFAVSLVEQHLREISRAW-RLSDMVPIFLAAILESLTRRLLELAGNEAQ 75
>UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 885
Score = 34.3 bits (75), Expect = 3.7
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVL 228
L FPVGRI R L + + RV AA+Y AA LEY+ E +
Sbjct: 114 LVFPVGRIFRWLLDMKVAC-RVYDAAAIYLAATLEYIAEETI 154
>UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n=2;
Mus musculus|Rep: PREDICTED: similar to H2A-Bbd - Mus
musculus
Length = 172
Score = 33.9 bits (74), Expect = 4.9
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHG-RVGATAAVYSAAILEYLTAEVLELAGNASK 252
L F V + + L R SH R+ ++ AAILE+LT +LELAGN ++
Sbjct: 23 LIFTVSLVEQSL--RDLSHAWRLSDMVPIFLAAILEFLTYRLLELAGNETQ 71
>UniRef50_UPI0000E49FF4 Cluster: PREDICTED: similar to KIAA0467
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to KIAA0467 protein -
Strongylocentrotus purpuratus
Length = 1717
Score = 33.1 bits (72), Expect = 8.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 615 SPYSLHISITYSYIFSPDQQFQSHH 541
S Y H+ SY+F+PD FQSH+
Sbjct: 1264 SAYDFHLRTIQSYLFNPDMGFQSHY 1288
>UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila
melanogaster|Rep: Histone H2A - Drosophila melanogaster
(Fruit fly)
Length = 286
Score = 33.1 bits (72), Expect = 8.6
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 192 CRYFGISYSRGFGVGGKCV*RLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGG 350
CR GIS + G RI PRHL LAIR D EL+ L+ TI G
Sbjct: 127 CRN-GISGPEVLELAGNAARDNNKTRIIPRHLHLAIRNDTELNMLLSGVTITQG 179
>UniRef50_O44859 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 221
Score = 33.1 bits (72), Expect = 8.6
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 394 PFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIAS-CKCRG 275
P+FP +D+C G+T P V LSNS P+ S C G
Sbjct: 90 PWFPYQDVCWNGLTSIPQAVFQSELSNSHQPVPQSESSCSG 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,107,693
Number of Sequences: 1657284
Number of extensions: 15446206
Number of successful extensions: 33977
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 32727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33935
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -