Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00871
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0433 + 3353255-3353374,3353532-3353828 97 1e-20
10_08_0018 + 14164103-14164225,14164596-14164892 92 6e-19
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 91 7e-19
05_05_0119 - 22512228-22512500,22512577-22512795 66 3e-11
12_02_0605 - 20924385-20924606,20924705-20924899 65 7e-11
12_02_0151 - 14468480-14468698,14468902-14469090 65 7e-11
07_03_0791 + 21539069-21539257,21539493-21539711 65 7e-11
07_03_0790 + 21536389-21536577,21536854-21537072 65 7e-11
03_05_0949 + 29089293-29089487,29089592-29089810 65 7e-11
03_02_0562 - 9469263-9469517,9469619-9469843 65 7e-11
08_02_0735 + 20564451-20564525,20566346-20566561 61 1e-09
05_01_0107 + 706936-707202,707231-707485 50 3e-06
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098 31 1.4
12_02_1023 + 25393555-25393901,25396224-25396368 30 1.9
09_02_0555 - 10588685-10592038 29 3.3
11_01_0426 + 3271324-3271377,3272114-3272227,3272475-3272588,327... 29 5.8
02_04_0054 + 19279579-19280772 29 5.8
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 28 7.7
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRIHR LK+R ++HGRVGATAAVYSAAILEYLTAEVLELAGNASKD K
Sbjct: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 91
Score = 89.4 bits (212), Expect = 3e-18
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +3
Query: 255 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 389
LKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 90 LKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 134
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 91.9 bits (218), Expect = 6e-19
Identities = 44/53 (83%), Positives = 49/53 (92%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
+QFPVGRIHR LK R +++GRVGATAAVY+AAILEYLTAEVLELAGNASKD K
Sbjct: 40 IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLK 92
Score = 89.4 bits (212), Expect = 3e-18
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +3
Query: 255 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 389
LKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 91 LKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 135
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 91.5 bits (217), Expect = 7e-19
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +1
Query: 109 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
FPVGRIHR LK RT ++GRVGATAAVYSAAILEYLTAEVLELAGNASKD K
Sbjct: 65 FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 115
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +3
Query: 255 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV 356
LKVKRITPRHLQLAIRGDEELD+LIK TIAGG V
Sbjct: 114 LKVKRITPRHLQLAIRGDEELDTLIKGTIAGGVV 147
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R+LK S R+G A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 35 LQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 86
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPGA 407
K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK G A
Sbjct: 86 KKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGSAA 136
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 64.9 bits (151), Expect = 7e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 78
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGG 398
K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH++L+ KKGG
Sbjct: 78 KKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 125
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 398
K RI PRH+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 76 KKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 407
K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G A
Sbjct: 76 KKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGSA 126
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 398
K RI PRH+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 76 KKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 64.9 bits (151), Expect = 7e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 78
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 398
K RI PRH+QLA+R DEEL L+ TIA GGV+P+I + L+ KKGG
Sbjct: 78 KKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKKGG 125
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 64.9 bits (151), Expect = 7e-11
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRI R+LK + R+G A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 37 LQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 88
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 88 KKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 133
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGGPGA 407
K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH L+ KK G A
Sbjct: 38 KKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGSSA 88
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 102 KKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 147
Score = 48.0 bits (109), Expect = 9e-06
Identities = 35/70 (50%), Positives = 40/70 (57%), Gaps = 17/70 (24%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE-----------------VLE 231
LQFPVGRI R+LK + RVG A VY AA+LEYL AE VLE
Sbjct: 34 LQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEASHCLSLPLPNPSKPSMVLE 92
Query: 232 LAGNASKD*K 261
LAGNA++D K
Sbjct: 93 LAGNAARDNK 102
>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
Length = 142
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 282 HLQLAIRGDEELDSLIKATIAGGG 353
HL L + G EELD L++ I GGG
Sbjct: 37 HLSLGVGGAEELDLLLQVGIGGGG 60
>12_02_1023 + 25393555-25393901,25396224-25396368
Length = 163
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 367 MCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFNL*THFP 236
MCG T PPA VA + S + S +G+ L HFP
Sbjct: 118 MCGWTAPPATVALPGVETSEAAAFESSTKKGISEEPPLLDAHFP 161
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -3
Query: 693 TSYIQNFKCPMNKQKLSLILIQSYFKSPYSLHISITYSYI 574
T + +N C + ++L +++Q +SPYS+H T Y+
Sbjct: 668 TLWNENRVCVPDNRELKQLILQEAHESPYSIHSGSTKMYL 707
>11_01_0426 +
3271324-3271377,3272114-3272227,3272475-3272588,
3272677-3272834,3273067-3273157,3273668-3273778
Length = 213
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 279 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 392
+ + L R DEELD L + GGV IH L+G+K
Sbjct: 141 QQMLLIKRQDEELDELSASVQRIGGVGLTIHDELVGQK 178
>02_04_0054 + 19279579-19280772
Length = 397
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 177 GSSLFCRYFGISYSRGFGVGGKCV*RLKVKRITP 278
G C F +S+++GFG+ KC+ LK + P
Sbjct: 221 GGDTTCLPFPVSFTKGFGLRSKCINWLKEWQALP 254
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 276 PRHLQLAIRGDEELDSLIKATIAGGGVIP 362
PRH+ + G E D L A+ AGG P
Sbjct: 174 PRHVSRVVIGSEVFDRLASASAAGGWAAP 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,753,860
Number of Sequences: 37544
Number of extensions: 434341
Number of successful extensions: 1068
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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