Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00871
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical p... 97 1e-20
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 67 1e-11
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 67 1e-11
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 67 1e-11
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 67 1e-11
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 67 1e-11
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 67 1e-11
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 67 1e-11
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 67 1e-11
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 67 1e-11
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 67 1e-11
Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical ... 33 0.24
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 30 2.3
AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like ... 30 2.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 2.3
Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical pr... 29 3.0
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 29 4.0
Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 28 9.1
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 9.1
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 28 9.1
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 9.1
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 9.1
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 28 9.1
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 9.1
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 28 9.1
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 9.1
>U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical
protein R08C7.3 protein.
Length = 140
Score = 97.5 bits (232), Expect = 1e-20
Identities = 49/53 (92%), Positives = 49/53 (92%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGRIHR LK RTTS GRVGATAAVYSAAILEYLTAEVLELAGNASKD K
Sbjct: 28 LQFPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 80
Score = 91.5 bits (217), Expect = 7e-19
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +3
Query: 255 LKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGGP 401
LKVKRITPRHL LAIRGDEELD+LIKATIAGGGVIPHIH+ L+ KKG P
Sbjct: 79 LKVKRITPRHLHLAIRGDEELDTLIKATIAGGGVIPHIHRYLMNKKGAP 127
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 392
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKK 121
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
LQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 25 LQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 398
K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 76 KKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical
protein ZK1251.1 protein.
Length = 145
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 103 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD*K 261
L FPVGRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A+ + K
Sbjct: 36 LTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESK 88
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +3
Query: 258 KVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIP-HIHKSLIGKK 392
K R+TPRHL LAI GD+E L+ K T+ GGV P IH SL+ KK
Sbjct: 88 KKSRVTPRHLHLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLLPKK 134
>AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical
protein T05A8.2 protein.
Length = 221
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 394 PFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIAS-CKCRG 275
P+FP +D+C G+T P V LSNS P+ S C G
Sbjct: 90 PWFPYQDVCWNGLTSIPQAVFQSELSNSHQPVPQSESSCSG 130
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 35 VVKRVKILVKPRRKLSQDQLEQDFSFPLEEFIGILRIGQQATGA*ELRQQFILPLFWNIL 214
+V R K ++ RR+ ++D++ + +EE I+ G Q+T ELR + WNI
Sbjct: 837 IVNRKKAILT-RRENNEDEIRESIR-DMEECDRIIE-GWQSTEIEELRAE------WNIK 887
Query: 215 QQRFWSWREMRLKIK 259
F SW EM +++
Sbjct: 888 LSEFESWHEMMQQVE 902
>AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like
protein protein.
Length = 555
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 35 VVKRVKILVKPRRKLSQDQLEQDFSFPLEEFIGILRIGQQATGA*ELRQQFILPLFWNIL 214
+V R K ++ RR+ ++D++ + +EE I+ G Q+T ELR + WNI
Sbjct: 149 IVNRKKAILT-RRENNEDEIRESIR-DMEECDRIIE-GWQSTEIEELRAE------WNIK 199
Query: 215 QQRFWSWREMRLKIK 259
F SW EM +++
Sbjct: 200 LSEFESWHEMMQQVE 214
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 35 VVKRVKILVKPRRKLSQDQLEQDFSFPLEEFIGILRIGQQATGA*ELRQQFILPLFWNIL 214
+V R K ++ RR+ ++D++ + +EE I+ G Q+T ELR + WNI
Sbjct: 837 IVNRKKAILT-RRENNEDEIRESIR-DMEECDRIIE-GWQSTEIEELRAE------WNIK 887
Query: 215 QQRFWSWREMRLKIK 259
F SW EM +++
Sbjct: 888 LSEFESWHEMMQQVE 902
>Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical
protein T08G3.1 protein.
Length = 339
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 732 PCSELQ*HCYAYPTSYIQNFKCPMNKQKLSLILIQSYFKSPYSLHISI-TYSYIFSPDQQ 556
P S L H AY YI N +K+ L+++L + + S Y IS+ +I+ +
Sbjct: 63 PASGLHSHSAAYIV-YINNRPFDASKEFLTVLL--AVYCSLYCAAISLLAVQFIY----R 115
Query: 555 FQSHHCPLH*YYFNRNYV 502
+ + CP+H YFN+ Y+
Sbjct: 116 YIAVFCPIHLKYFNKCYL 133
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 210 SYSRGFGVGGKCV*RLKVKRITPRHLQLAIRGDEELD 320
SY++ G K R+K R+ PR L+ DEELD
Sbjct: 76 SYTKPTPGGPKLHNRIKCPRVVPRSFWLSFEEDEELD 112
>Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical
protein C17E4.3 protein.
Length = 431
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 373 LCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
+CMCG T P + + PLI+ CKC G +
Sbjct: 15 ICMCGETSIPYLG-----QQAGEPLISPCKCSGTM 44
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 184 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 222
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 184 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 222
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 397 PPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVI 269
PP F + C PP ++ S P+ SCKCRG I
Sbjct: 118 PPMFQDEEECPPDSIRPPESIS----KESCCPIRQSCKCRGSI 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,014,320
Number of Sequences: 27780
Number of extensions: 384041
Number of successful extensions: 944
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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