Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00870
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07956-1|AAA58642.1| 702|Homo sapiens 1,4-alpha-glucan branchin... 142 9e-34
BC012098-1|AAH12098.1| 702|Homo sapiens glucan (1,4-alpha-), br... 142 9e-34
AB209731-1|BAD92968.1| 754|Homo sapiens Glucan , branching enzy... 142 9e-34
J05556-1|AAA88021.1| 467|Homo sapiens neutrophil collagenase pr... 33 0.81
DQ141306-1|AAZ38714.1| 467|Homo sapiens matrix metalloproteinas... 33 0.81
BC074989-1|AAH74989.1| 467|Homo sapiens matrix metallopeptidase... 33 0.81
BC074988-1|AAH74988.1| 467|Homo sapiens matrix metallopeptidase... 33 0.81
BC024290-1|AAH24290.1| 329|Homo sapiens deoxynucleotidyltransfe... 33 0.81
BC009535-1|AAH09535.1| 212|Homo sapiens DNTTIP1 protein protein. 33 0.81
AL050348-11|CAI21036.1| 231|Homo sapiens deoxynucleotidyltransf... 33 0.81
AL050348-9|CAI21034.1| 279|Homo sapiens deoxynucleotidyltransfe... 33 0.81
AL050348-7|CAC17441.1| 329|Homo sapiens deoxynucleotidyltransfe... 33 0.81
AB035676-1|BAB62888.1| 329|Homo sapiens TdT binding protein pro... 33 0.81
>L07956-1|AAA58642.1| 702|Homo sapiens 1,4-alpha-glucan branching
enzyme protein.
Length = 702
Score = 142 bits (345), Expect = 9e-34
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +3
Query: 3 LWDSRLFNYSEIEVLRFLLSNLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSGHYDEY 182
LWDSRLF YS EVLRFLLSN+RW+ EEYRFDGFRFDGVTSMLYH G+G+GFSG Y EY
Sbjct: 321 LWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEY 380
Query: 183 YGLNVDTEALIYLMLANDIVHSI 251
+GL VD +AL YLMLAN +VH++
Sbjct: 381 FGLQVDEDALTYLMLANHLVHTL 403
Score = 136 bits (330), Expect = 6e-32
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 505 NIAFWLMDAAMYTHMSTLSEPSAVVERGLALHCMIRLITHALGGEGYLNFIGNEFGHPEW 684
++AFWLMDA MYT+MS L+ + V++RG+ LH MIRLITH LGGEGYLNF+GNEFGHPEW
Sbjct: 489 SLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEW 548
Query: 685 LDFPRAGNNSSYHYARR 735
LDFPR GNN SYHYARR
Sbjct: 549 LDFPRKGNNESYHYARR 565
Score = 122 bits (294), Expect = 1e-27
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = +2
Query: 263 ITIAEDVSGMPASCRPVREGGTGFDYRLGMAIPDMWIXXXXXXXXXXWKMGHIVHTLTNR 442
ITIAEDVSGMPA C P+ +GG GFDYRL MAIPD WI W MG IV+TLTNR
Sbjct: 408 ITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNR 467
Query: 443 RWMEGTIAYAESHDQALVGDKT*RF 517
R++E IAYAESHDQALVGDK+ F
Sbjct: 468 RYLEKCIAYAESHDQALVGDKSLAF 492
>BC012098-1|AAH12098.1| 702|Homo sapiens glucan (1,4-alpha-),
branching enzyme 1 (glycogen branching enzyme, Andersen
di protein.
Length = 702
Score = 142 bits (345), Expect = 9e-34
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +3
Query: 3 LWDSRLFNYSEIEVLRFLLSNLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSGHYDEY 182
LWDSRLF YS EVLRFLLSN+RW+ EEYRFDGFRFDGVTSMLYH G+G+GFSG Y EY
Sbjct: 321 LWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEY 380
Query: 183 YGLNVDTEALIYLMLANDIVHSI 251
+GL VD +AL YLMLAN +VH++
Sbjct: 381 FGLQVDEDALTYLMLANHLVHTL 403
Score = 136 bits (330), Expect = 6e-32
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 505 NIAFWLMDAAMYTHMSTLSEPSAVVERGLALHCMIRLITHALGGEGYLNFIGNEFGHPEW 684
++AFWLMDA MYT+MS L+ + V++RG+ LH MIRLITH LGGEGYLNF+GNEFGHPEW
Sbjct: 489 SLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEW 548
Query: 685 LDFPRAGNNSSYHYARR 735
LDFPR GNN SYHYARR
Sbjct: 549 LDFPRKGNNESYHYARR 565
Score = 122 bits (294), Expect = 1e-27
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = +2
Query: 263 ITIAEDVSGMPASCRPVREGGTGFDYRLGMAIPDMWIXXXXXXXXXXWKMGHIVHTLTNR 442
ITIAEDVSGMPA C P+ +GG GFDYRL MAIPD WI W MG IV+TLTNR
Sbjct: 408 ITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNR 467
Query: 443 RWMEGTIAYAESHDQALVGDKT*RF 517
R++E IAYAESHDQALVGDK+ F
Sbjct: 468 RYLEKCIAYAESHDQALVGDKSLAF 492
>AB209731-1|BAD92968.1| 754|Homo sapiens Glucan , branching enzyme
1 variant protein.
Length = 754
Score = 142 bits (345), Expect = 9e-34
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +3
Query: 3 LWDSRLFNYSEIEVLRFLLSNLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSGHYDEY 182
LWDSRLF YS EVLRFLLSN+RW+ EEYRFDGFRFDGVTSMLYH G+G+GFSG Y EY
Sbjct: 373 LWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEY 432
Query: 183 YGLNVDTEALIYLMLANDIVHSI 251
+GL VD +AL YLMLAN +VH++
Sbjct: 433 FGLQVDEDALTYLMLANHLVHTL 455
Score = 136 bits (330), Expect = 6e-32
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 505 NIAFWLMDAAMYTHMSTLSEPSAVVERGLALHCMIRLITHALGGEGYLNFIGNEFGHPEW 684
++AFWLMDA MYT+MS L+ + V++RG+ LH MIRLITH LGGEGYLNF+GNEFGHPEW
Sbjct: 541 SLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEW 600
Query: 685 LDFPRAGNNSSYHYARR 735
LDFPR GNN SYHYARR
Sbjct: 601 LDFPRKGNNESYHYARR 617
Score = 122 bits (294), Expect = 1e-27
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = +2
Query: 263 ITIAEDVSGMPASCRPVREGGTGFDYRLGMAIPDMWIXXXXXXXXXXWKMGHIVHTLTNR 442
ITIAEDVSGMPA C P+ +GG GFDYRL MAIPD WI W MG IV+TLTNR
Sbjct: 460 ITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNR 519
Query: 443 RWMEGTIAYAESHDQALVGDKT*RF 517
R++E IAYAESHDQALVGDK+ F
Sbjct: 520 RYLEKCIAYAESHDQALVGDKSLAF 544
>J05556-1|AAA88021.1| 467|Homo sapiens neutrophil collagenase
protein.
Length = 467
Score = 33.5 bits (73), Expect = 0.81
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 63 NLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALIYLMLAN 233
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 234 DIVHSIDTGSS 266
+ HS+ S
Sbjct: 218 EFGHSLGLAHS 228
>DQ141306-1|AAZ38714.1| 467|Homo sapiens matrix metalloproteinase 8
(neutrophil collagenase) protein.
Length = 467
Score = 33.5 bits (73), Expect = 0.81
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 63 NLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALIYLMLAN 233
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 234 DIVHSIDTGSS 266
+ HS+ S
Sbjct: 218 EFGHSLGLAHS 228
>BC074989-1|AAH74989.1| 467|Homo sapiens matrix metallopeptidase 8
(neutrophil collagenase) protein.
Length = 467
Score = 33.5 bits (73), Expect = 0.81
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 63 NLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALIYLMLAN 233
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 234 DIVHSIDTGSS 266
+ HS+ S
Sbjct: 218 EFGHSLGLAHS 228
>BC074988-1|AAH74988.1| 467|Homo sapiens matrix metallopeptidase 8
(neutrophil collagenase) protein.
Length = 467
Score = 33.5 bits (73), Expect = 0.81
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 63 NLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSG--HYD-EYYGLNVDTEALIYLMLAN 233
N+ +YQ ++ D FDG +L H+ G+G G H+D E N ++L+ A+
Sbjct: 159 NIAFYQRDHG-DNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAH 217
Query: 234 DIVHSIDTGSS 266
+ HS+ S
Sbjct: 218 EFGHSLGLAHS 228
>BC024290-1|AAH24290.1| 329|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 329
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 191 ECRHRGPDLPDARQRHCAQHRYRVITIAEDVSGMPASCRPVREGGTGFD 337
EC HRG LP R+ H A + P SC P+R G +D
Sbjct: 155 ECAHRGSPLPKKRKGRPPGHILSSDRAAAGMVWKPKSCEPIRREGPKWD 203
>BC009535-1|AAH09535.1| 212|Homo sapiens DNTTIP1 protein protein.
Length = 212
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 191 ECRHRGPDLPDARQRHCAQHRYRVITIAEDVSGMPASCRPVREGGTGFD 337
EC HRG LP R+ H A + P SC P+R G +D
Sbjct: 38 ECAHRGSPLPKKRKGRPPGHILSSDRAAAGMVWKPKSCEPIRREGPKWD 86
>AL050348-11|CAI21036.1| 231|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 231
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 191 ECRHRGPDLPDARQRHCAQHRYRVITIAEDVSGMPASCRPVREGGTGFD 337
EC HRG LP R+ H A + P SC P+R G +D
Sbjct: 81 ECAHRGSPLPKKRKGRPPGHILSSDRAAAGMVWKPKSCEPIRREGPKWD 129
>AL050348-9|CAI21034.1| 279|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 191 ECRHRGPDLPDARQRHCAQHRYRVITIAEDVSGMPASCRPVREGGTGFD 337
EC HRG LP R+ H A + P SC P+R G +D
Sbjct: 105 ECAHRGSPLPKKRKGRPPGHILSSDRAAAGMVWKPKSCEPIRREGPKWD 153
>AL050348-7|CAC17441.1| 329|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 329
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 191 ECRHRGPDLPDARQRHCAQHRYRVITIAEDVSGMPASCRPVREGGTGFD 337
EC HRG LP R+ H A + P SC P+R G +D
Sbjct: 155 ECAHRGSPLPKKRKGRPPGHILSSDRAAAGMVWKPKSCEPIRREGPKWD 203
>AB035676-1|BAB62888.1| 329|Homo sapiens TdT binding protein
protein.
Length = 329
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 191 ECRHRGPDLPDARQRHCAQHRYRVITIAEDVSGMPASCRPVREGGTGFD 337
EC HRG LP R+ H A + P SC P+R G +D
Sbjct: 155 ECAHRGSPLPKKRKGRPPGHILSSDRAAAGMVWKPKSCEPIRREGPKWD 203
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,460,161
Number of Sequences: 237096
Number of extensions: 1935245
Number of successful extensions: 8051
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8051
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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