Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00870
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical pr...   130   8e-31
Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical pr...   130   8e-31
AC006649-1|ABN43084.1|  139|Caenorhabditis elegans Hypothetical ...    29   4.5  
U29244-14|AAC71095.1|  774|Caenorhabditis elegans Fzo (fzo mitoc...    28   6.0  

>Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical
           protein T04A8.7b protein.
          Length = 606

 Score =  130 bits (315), Expect = 8e-31
 Identities = 54/81 (66%), Positives = 68/81 (83%)
 Frame = +3

Query: 3   LWDSRLFNYSEIEVLRFLLSNLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSGHYDEY 182
           LWDSRLF+Y++ E LRFLLSN+RW+ EEY FDGFRFDGV+SM+YHS G+ + F G Y  Y
Sbjct: 227 LWDSRLFDYTQTETLRFLLSNVRWWVEEYGFDGFRFDGVSSMIYHSHGMNDDFCGGYPMY 286

Query: 183 YGLNVDTEALIYLMLANDIVH 245
           +GLN DT++L+YLMLAND +H
Sbjct: 287 FGLNADTDSLVYLMLANDFLH 307



 Score =  121 bits (291), Expect = 6e-28
 Identities = 53/76 (69%), Positives = 61/76 (80%)
 Frame = +1

Query: 508 IAFWLMDAAMYTHMSTLSEPSAVVERGLALHCMIRLITHALGGEGYLNFIGNEFGHPEWL 687
           IAFWLMD  MY  MST S  + +++RGL+LH +IRLIT  LGGE +LNFIGNEFGHPEWL
Sbjct: 396 IAFWLMDKEMYDFMSTDSPLTPIIDRGLSLHKLIRLITIGLGGEAWLNFIGNEFGHPEWL 455

Query: 688 DFPRAGNNSSYHYARR 735
           DFPR GN  S+HYARR
Sbjct: 456 DFPRVGNGESFHYARR 471



 Score =  117 bits (282), Expect = 8e-27
 Identities = 55/86 (63%), Positives = 61/86 (70%)
 Frame = +2

Query: 260 VITIAEDVSGMPASCRPVREGGTGFDYRLGMAIPDMWIXXXXXXXXXXWKMGHIVHTLTN 439
           +ITIAE+VSGMP  CRPV EGG GFDYRL MA+PDMWI          WK+  IV  L N
Sbjct: 313 MITIAEEVSGMPGICRPVEEGGQGFDYRLAMALPDMWIKILKHTSDEDWKIDDIVFNLEN 372

Query: 440 RRWMEGTIAYAESHDQALVGDKT*RF 517
           RR+ E  +AYAESHDQALVGDKT  F
Sbjct: 373 RRYAEKHVAYAESHDQALVGDKTIAF 398


>Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical
           protein T04A8.7a protein.
          Length = 681

 Score =  130 bits (315), Expect = 8e-31
 Identities = 54/81 (66%), Positives = 68/81 (83%)
 Frame = +3

Query: 3   LWDSRLFNYSEIEVLRFLLSNLRWYQEEYRFDGFRFDGVTSMLYHSRGIGEGFSGHYDEY 182
           LWDSRLF+Y++ E LRFLLSN+RW+ EEY FDGFRFDGV+SM+YHS G+ + F G Y  Y
Sbjct: 302 LWDSRLFDYTQTETLRFLLSNVRWWVEEYGFDGFRFDGVSSMIYHSHGMNDDFCGGYPMY 361

Query: 183 YGLNVDTEALIYLMLANDIVH 245
           +GLN DT++L+YLMLAND +H
Sbjct: 362 FGLNADTDSLVYLMLANDFLH 382



 Score =  121 bits (291), Expect = 6e-28
 Identities = 53/76 (69%), Positives = 61/76 (80%)
 Frame = +1

Query: 508 IAFWLMDAAMYTHMSTLSEPSAVVERGLALHCMIRLITHALGGEGYLNFIGNEFGHPEWL 687
           IAFWLMD  MY  MST S  + +++RGL+LH +IRLIT  LGGE +LNFIGNEFGHPEWL
Sbjct: 471 IAFWLMDKEMYDFMSTDSPLTPIIDRGLSLHKLIRLITIGLGGEAWLNFIGNEFGHPEWL 530

Query: 688 DFPRAGNNSSYHYARR 735
           DFPR GN  S+HYARR
Sbjct: 531 DFPRVGNGESFHYARR 546



 Score =  117 bits (282), Expect = 8e-27
 Identities = 55/86 (63%), Positives = 61/86 (70%)
 Frame = +2

Query: 260 VITIAEDVSGMPASCRPVREGGTGFDYRLGMAIPDMWIXXXXXXXXXXWKMGHIVHTLTN 439
           +ITIAE+VSGMP  CRPV EGG GFDYRL MA+PDMWI          WK+  IV  L N
Sbjct: 388 MITIAEEVSGMPGICRPVEEGGQGFDYRLAMALPDMWIKILKHTSDEDWKIDDIVFNLEN 447

Query: 440 RRWMEGTIAYAESHDQALVGDKT*RF 517
           RR+ E  +AYAESHDQALVGDKT  F
Sbjct: 448 RRYAEKHVAYAESHDQALVGDKTIAF 473


>AC006649-1|ABN43084.1|  139|Caenorhabditis elegans Hypothetical
           protein H01M10.3 protein.
          Length = 139

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 102 FRFDGVTSMLYHSRGIGEGFSGHYDEYYGLNVDTEALIYLMLANDIVHSIDTGSSLLLR 278
           F F G+   +Y S    E     +D +   NV  E  +YL    D++  +DT  S +++
Sbjct: 82  FEFSGLEPYIYISHACTENRVEAWDSF---NVTLETSMYLSATFDVIIDLDTKKSTVIK 137


>U29244-14|AAC71095.1|  774|Caenorhabditis elegans Fzo (fzo
           mitochondrial fusion protein)related protein 1 protein.
          Length = 774

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 225 ASGRSGPRCLHSVRNIRR-SDQRTLHRYRD 139
           ASG S  R LHS++N RR +D   L R+R+
Sbjct: 13  ASGDSNHRGLHSLKNSRRAADNEPLLRFRE 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,627,778
Number of Sequences: 27780
Number of extensions: 296950
Number of successful extensions: 755
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)