Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00869
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031791-1|AAH31791.1| 346|Homo sapiens ER lipid raft associate... 148 3e-35
AL138921-3|CAH72398.1| 346|Homo sapiens ER lipid raft associate... 148 3e-35
AK222480-1|BAD96200.1| 346|Homo sapiens SPFH domain family, mem... 148 3e-35
AF064093-1|AAC26658.1| 346|Homo sapiens KE04p protein. 148 3e-35
BC005950-1|AAH05950.1| 347|Homo sapiens ERLIN2 protein protein. 139 1e-32
AY358108-1|AAQ88475.1| 339|Homo sapiens C8orf2 protein. 139 1e-32
AB018790-1|BAA36845.1| 339|Homo sapiens protein ( Homo sapiens ... 139 1e-32
BC067765-1|AAH67765.1| 206|Homo sapiens ERLIN2 protein protein. 136 1e-31
BC050611-1|AAH50611.1| 229|Homo sapiens ERLIN2 protein protein. 136 1e-31
BC048308-1|AAH48308.1| 152|Homo sapiens ER lipid raft associate... 136 1e-31
AY358851-1|AAQ89210.1| 152|Homo sapiens C8orf2 protein. 136 1e-31
X86373-1|CAA60132.1| 504|Homo sapiens SRP 54 protein. 30 8.5
U51920-1|AAC50994.1| 504|Homo sapiens signal recognition partic... 30 8.5
BC003389-1|AAH03389.1| 504|Homo sapiens signal recognition part... 30 8.5
BC000652-1|AAH00652.1| 504|Homo sapiens signal recognition part... 30 8.5
>BC031791-1|AAH31791.1| 346|Homo sapiens ER lipid raft associated 1
protein.
Length = 346
Score = 148 bits (358), Expect = 3e-35
Identities = 66/83 (79%), Positives = 77/83 (92%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDL 682
P +V D+VRN+TA+YD+TLIFNK+HHELNQFCSAHTL EVYI+LFDQIDENL+ ALQKDL
Sbjct: 97 PYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDL 156
Query: 683 HEMAPGLRVQAVRVTKPKIPESI 751
+ MAPGL +QAVRVTKPKIPE+I
Sbjct: 157 NLMAPGLTIQAVRVTKPKIPEAI 179
Score = 128 bits (308), Expect = 3e-29
Identities = 55/85 (64%), Positives = 71/85 (83%)
Frame = +3
Query: 258 VGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNV 437
V V ++ S+HK+EEGH+ VYYRGGALL S G+H+M+P +T+++++QTTLQTDEVKNV
Sbjct: 15 VAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNV 74
Query: 438 PCGTSGGVLIYFERIEVVNKLDPQA 512
PCGTSGGV+IY +RIEVVN L P A
Sbjct: 75 PCGTSGGVMIYIDRIEVVNMLAPYA 99
>AL138921-3|CAH72398.1| 346|Homo sapiens ER lipid raft associated 1
protein.
Length = 346
Score = 148 bits (358), Expect = 3e-35
Identities = 66/83 (79%), Positives = 77/83 (92%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDL 682
P +V D+VRN+TA+YD+TLIFNK+HHELNQFCSAHTL EVYI+LFDQIDENL+ ALQKDL
Sbjct: 97 PYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDL 156
Query: 683 HEMAPGLRVQAVRVTKPKIPESI 751
+ MAPGL +QAVRVTKPKIPE+I
Sbjct: 157 NLMAPGLTIQAVRVTKPKIPEAI 179
Score = 128 bits (308), Expect = 3e-29
Identities = 55/85 (64%), Positives = 71/85 (83%)
Frame = +3
Query: 258 VGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNV 437
V V ++ S+HK+EEGH+ VYYRGGALL S G+H+M+P +T+++++QTTLQTDEVKNV
Sbjct: 15 VAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNV 74
Query: 438 PCGTSGGVLIYFERIEVVNKLDPQA 512
PCGTSGGV+IY +RIEVVN L P A
Sbjct: 75 PCGTSGGVMIYIDRIEVVNMLAPYA 99
>AK222480-1|BAD96200.1| 346|Homo sapiens SPFH domain family, member
1 variant protein.
Length = 346
Score = 148 bits (358), Expect = 3e-35
Identities = 66/83 (79%), Positives = 77/83 (92%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDL 682
P +V D+VRN+TA+YD+TLIFNK+HHELNQFCSAHTL EVYI+LFDQIDENL+ ALQKDL
Sbjct: 97 PYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDL 156
Query: 683 HEMAPGLRVQAVRVTKPKIPESI 751
+ MAPGL +QAVRVTKPKIPE+I
Sbjct: 157 NLMAPGLTIQAVRVTKPKIPEAI 179
Score = 128 bits (308), Expect = 3e-29
Identities = 55/85 (64%), Positives = 71/85 (83%)
Frame = +3
Query: 258 VGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNV 437
V V ++ S+HK+EEGH+ VYYRGGALL S G+H+M+P +T+++++QTTLQTDEVKNV
Sbjct: 15 VAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNV 74
Query: 438 PCGTSGGVLIYFERIEVVNKLDPQA 512
PCGTSGGV+IY +RIEVVN L P A
Sbjct: 75 PCGTSGGVMIYIDRIEVVNMLAPYA 99
>AF064093-1|AAC26658.1| 346|Homo sapiens KE04p protein.
Length = 346
Score = 148 bits (358), Expect = 3e-35
Identities = 66/83 (79%), Positives = 77/83 (92%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDL 682
P +V D+VRN+TA+YD+TLIFNK+HHELNQFCSAHTL EVYI+LFDQIDENL+ ALQKDL
Sbjct: 97 PYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDL 156
Query: 683 HEMAPGLRVQAVRVTKPKIPESI 751
+ MAPGL +QAVRVTKPKIPE+I
Sbjct: 157 NLMAPGLTIQAVRVTKPKIPEAI 179
Score = 128 bits (308), Expect = 3e-29
Identities = 55/85 (64%), Positives = 71/85 (83%)
Frame = +3
Query: 258 VGVTVHFSLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNV 437
V V ++ S+HK+EEGH+ VYYRGGALL S G+H+M+P +T+++++QTTLQTDEVKNV
Sbjct: 15 VAVLLYASIHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNV 74
Query: 438 PCGTSGGVLIYFERIEVVNKLDPQA 512
PCGTSGGV+IY +RIEVVN L P A
Sbjct: 75 PCGTSGGVMIYIDRIEVVNMLAPYA 99
>BC005950-1|AAH05950.1| 347|Homo sapiens ERLIN2 protein protein.
Length = 347
Score = 139 bits (336), Expect = 1e-32
Identities = 61/83 (73%), Positives = 73/83 (87%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDL 682
P +V D+V+N+TA+YD+ LIFNK+HHELNQFCS HTL EVYI+LFDQIDENL+ ALQ+DL
Sbjct: 97 PNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDL 156
Query: 683 HEMAPGLRVQAVRVTKPKIPESI 751
MAPGL +QAVRVTKP IPE+I
Sbjct: 157 TSMAPGLVIQAVRVTKPNIPEAI 179
Score = 135 bits (326), Expect = 2e-31
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +3
Query: 279 SLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGG 458
++HK+EEGH+GVYYRGGALL TS GFH+M+P +TSYK +QTTLQTDEVKNVPCGTSGG
Sbjct: 22 AVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKPVQTTLQTDEVKNVPCGTSGG 81
Query: 459 VLIYFERIEVVNKLDPQA 512
V+IYF+RIEVVN L P A
Sbjct: 82 VMIYFDRIEVVNFLVPNA 99
>AY358108-1|AAQ88475.1| 339|Homo sapiens C8orf2 protein.
Length = 339
Score = 139 bits (336), Expect = 1e-32
Identities = 61/83 (73%), Positives = 73/83 (87%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDL 682
P +V D+V+N+TA+YD+ LIFNK+HHELNQFCS HTL EVYI+LFDQIDENL+ ALQ+DL
Sbjct: 97 PNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDL 156
Query: 683 HEMAPGLRVQAVRVTKPKIPESI 751
MAPGL +QAVRVTKP IPE+I
Sbjct: 157 TSMAPGLVIQAVRVTKPNIPEAI 179
Score = 136 bits (328), Expect = 1e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 279 SLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGG 458
++HK+EEGH+GVYYRGGALL TS GFH+M+P +TSYK++QTTLQTDEVKNVPCGTSGG
Sbjct: 22 AVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGG 81
Query: 459 VLIYFERIEVVNKLDPQA 512
V+IYF+RIEVVN L P A
Sbjct: 82 VMIYFDRIEVVNFLVPNA 99
>AB018790-1|BAA36845.1| 339|Homo sapiens protein ( Homo sapiens
gene, complete cds, similar to Caenorhabditis elegans
C42C1.9 gene sequence. ).
Length = 339
Score = 139 bits (336), Expect = 1e-32
Identities = 61/83 (73%), Positives = 73/83 (87%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQKDL 682
P +V D+V+N+TA+YD+ LIFNK+HHELNQFCS HTL EVYI+LFDQIDENL+ ALQ+DL
Sbjct: 97 PNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDL 156
Query: 683 HEMAPGLRVQAVRVTKPKIPESI 751
MAPGL +QAVRVTKP IPE+I
Sbjct: 157 TSMAPGLVIQAVRVTKPNIPEAI 179
Score = 136 bits (328), Expect = 1e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 279 SLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGG 458
++HK+EEGH+GVYYRGGALL TS GFH+M+P +TSYK++QTTLQTDEVKNVPCGTSGG
Sbjct: 22 AVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGG 81
Query: 459 VLIYFERIEVVNKLDPQA 512
V+IYF+RIEVVN L P A
Sbjct: 82 VMIYFDRIEVVNFLVPNA 99
>BC067765-1|AAH67765.1| 206|Homo sapiens ERLIN2 protein protein.
Length = 206
Score = 136 bits (328), Expect = 1e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 279 SLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGG 458
++HK+EEGH+GVYYRGGALL TS GFH+M+P +TSYK++QTTLQTDEVKNVPCGTSGG
Sbjct: 22 AVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGG 81
Query: 459 VLIYFERIEVVNKLDPQA 512
V+IYF+RIEVVN L P A
Sbjct: 82 VMIYFDRIEVVNFLVPNA 99
Score = 81.8 bits (193), Expect = 3e-15
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQK-- 676
P +V D+V+N+TA+YD+ LIFNK+HHELNQFCS HTL EVYI+LF + L++
Sbjct: 97 PNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFGKKVSPEHAVLKQGS 156
Query: 677 ----DLHEMAPGLRVQAVRVT 727
LH + PG +Q V VT
Sbjct: 157 WNPASLHCLKPGC-LQGVMVT 176
>BC050611-1|AAH50611.1| 229|Homo sapiens ERLIN2 protein protein.
Length = 229
Score = 136 bits (328), Expect = 1e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 279 SLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGG 458
++HK+EEGH+GVYYRGGALL TS GFH+M+P +TSYK++QTTLQTDEVKNVPCGTSGG
Sbjct: 45 AVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGG 104
Query: 459 VLIYFERIEVVNKLDPQA 512
V+IYF+RIEVVN L P A
Sbjct: 105 VMIYFDRIEVVNFLVPNA 122
Score = 81.8 bits (193), Expect = 3e-15
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLFDQIDENLRTALQK-- 676
P +V D+V+N+TA+YD+ LIFNK+HHELNQFCS HTL EVYI+LF + L++
Sbjct: 120 PNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFGKKVSPEHAVLKQGS 179
Query: 677 ----DLHEMAPGLRVQAVRVT 727
LH + PG +Q V VT
Sbjct: 180 WNPASLHCLKPGC-LQGVMVT 199
>BC048308-1|AAH48308.1| 152|Homo sapiens ER lipid raft associated 2
protein.
Length = 152
Score = 136 bits (328), Expect = 1e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 279 SLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGG 458
++HK+EEGH+GVYYRGGALL TS GFH+M+P +TSYK++QTTLQTDEVKNVPCGTSGG
Sbjct: 22 AVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGG 81
Query: 459 VLIYFERIEVVNKLDPQA 512
V+IYF+RIEVVN L P A
Sbjct: 82 VMIYFDRIEVVNFLVPNA 99
Score = 81.0 bits (191), Expect = 5e-15
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLF 637
P +V D+V+N+TA+YD+ LIFNK+HHELNQFCS HTL EVYI+LF
Sbjct: 97 PNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELF 141
>AY358851-1|AAQ89210.1| 152|Homo sapiens C8orf2 protein.
Length = 152
Score = 136 bits (328), Expect = 1e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 279 SLHKVEEGHVGVYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGG 458
++HK+EEGH+GVYYRGGALL TS GFH+M+P +TSYK++QTTLQTDEVKNVPCGTSGG
Sbjct: 22 AVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGG 81
Query: 459 VLIYFERIEVVNKLDPQA 512
V+IYF+RIEVVN L P A
Sbjct: 82 VMIYFDRIEVVNFLVPNA 99
Score = 81.0 bits (191), Expect = 5e-15
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +2
Query: 503 PTSVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLHEVYIDLF 637
P +V D+V+N+TA+YD+ LIFNK+HHELNQFCS HTL EVYI+LF
Sbjct: 97 PNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELF 141
>X86373-1|CAA60132.1| 504|Homo sapiens SRP 54 protein.
Length = 504
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 584 LNQFCSAHTLHEVYIDLFDQIDENLRTALQKDLHEMAPGL 703
L + C+A +V I L Q+ EN+++A+ DL EMA GL
Sbjct: 32 LKEVCTALLEADVNIKLVKQLRENVKSAI--DLEEMASGL 69
>U51920-1|AAC50994.1| 504|Homo sapiens signal recognition particle
protein.
Length = 504
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 584 LNQFCSAHTLHEVYIDLFDQIDENLRTALQKDLHEMAPGL 703
L + C+A +V I L Q+ EN+++A+ DL EMA GL
Sbjct: 32 LKEVCTALLEADVNIKLVKQLRENVKSAI--DLEEMASGL 69
>BC003389-1|AAH03389.1| 504|Homo sapiens signal recognition
particle 54kDa protein.
Length = 504
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 584 LNQFCSAHTLHEVYIDLFDQIDENLRTALQKDLHEMAPGL 703
L + C+A +V I L Q+ EN+++A+ DL EMA GL
Sbjct: 32 LKEVCTALLEADVNIKLVKQLRENVKSAI--DLEEMASGL 69
>BC000652-1|AAH00652.1| 504|Homo sapiens signal recognition
particle 54kDa protein.
Length = 504
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 584 LNQFCSAHTLHEVYIDLFDQIDENLRTALQKDLHEMAPGL 703
L + C+A +V I L Q+ EN+++A+ DL EMA GL
Sbjct: 32 LKEVCTALLEADVNIKLVKQLRENVKSAI--DLEEMASGL 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,755,919
Number of Sequences: 237096
Number of extensions: 2201037
Number of successful extensions: 3320
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3320
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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