Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00868
         (785 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24262 Cluster: Blastopia polyprotein; n=2; Drosophila ...    70   6e-11
UniRef50_Q8RU68 Cluster: Putative 22 kDa kafirin cluster; Ty3-Gy...    35   2.7  
UniRef50_A7AL23 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_Q7XXG1 Cluster: OSJNBb0089K24.9 protein; n=1; Oryza sat...    33   8.1  

>UniRef50_Q24262 Cluster: Blastopia polyprotein; n=2; Drosophila
            melanogaster|Rep: Blastopia polyprotein - Drosophila
            melanogaster (Fruit fly)
          Length = 1333

 Score = 70.1 bits (164), Expect = 6e-11
 Identities = 34/59 (57%), Positives = 41/59 (69%)
 Frame = +2

Query: 2    LVAVKRTQFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKADAQVEGPNKTTTSADFMKKW 178
            LVA+KRTQF  G K+   +LGPY +  VK   RY+V+KA A VEGPN T+TS D MK W
Sbjct: 1253 LVAIKRTQFVAGRKMASGYLGPYEVTGVKDNGRYDVKKA-ANVEGPNVTSTSCDNMKLW 1310


>UniRef50_Q8RU68 Cluster: Putative 22 kDa kafirin cluster; Ty3-Gypsy
            type; n=6; Oryza sativa|Rep: Putative 22 kDa kafirin
            cluster; Ty3-Gypsy type - Oryza sativa (Rice)
          Length = 1230

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 23   QFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKADAQV 130
            +FG G KL P+++GP+ IVK   +  Y V+  DA +
Sbjct: 1091 RFGLGKKLSPRYVGPFAIVKRIGEVAYKVKLPDALI 1126


>UniRef50_A7AL23 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 78

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 14/56 (25%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = -2

Query: 187 VIRPLFHKISRCSSLVRAFNLCVS---LLNIVSILSFDLYYS-IWSQKLWFQFHSC 32
           +++ +   + R  + ++ F +C++   L+NI+SI+++   +S +W+Q LW    +C
Sbjct: 2   IMKEIVLSVKRQKTEIKIFCVCIALAYLMNIISIIAYGTSWSELWTQSLWMLLITC 57


>UniRef50_Q7XXG1 Cluster: OSJNBb0089K24.9 protein; n=1; Oryza sativa
            (japonica cultivar-group)|Rep: OSJNBb0089K24.9 protein -
            Oryza sativa subsp. japonica (Rice)
          Length = 1320

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 23   QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 112
            +F T  KL P+F+GPY+IV ++ +  Y +E
Sbjct: 1187 RFHTKGKLAPRFVGPYKIVSIRGEVAYQLE 1216


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,503,882
Number of Sequences: 1657284
Number of extensions: 10307957
Number of successful extensions: 22754
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22751
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)