Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00868
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly...    70   3e-12
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro...    70   3e-12
M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chor...    29   9.5  
AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA...    29   9.5  

>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
            polyprotein protein.
          Length = 1333

 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 34/59 (57%), Positives = 41/59 (69%)
 Frame = +2

Query: 2    LVAVKRTQFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKADAQVEGPNKTTTSADFMKKW 178
            LVA+KRTQF  G K+   +LGPY +  VK   RY+V+KA A VEGPN T+TS D MK W
Sbjct: 1253 LVAIKRTQFVAGRKMASGYLGPYEVTGVKDNGRYDVKKA-ANVEGPNVTSTSCDNMKLW 1310


>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
          Length = 1026

 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 34/59 (57%), Positives = 41/59 (69%)
 Frame = +2

Query: 2    LVAVKRTQFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKADAQVEGPNKTTTSADFMKKW 178
            LVA+KRTQF  G K+   +LGPY +  VK   RY+V+KA A VEGPN T+TS D MK W
Sbjct: 946  LVAIKRTQFVAGRKMASGYLGPYEVTGVKDNGRYDVKKA-ANVEGPNVTSTSCDNMKLW 1003


>M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chorion-1
            fc177 proteinprecursor protein.
          Length = 1589

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 17   RTQFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKADAQVEGPNKT 148
            RTQ     K KPK + P +++K KR  R   +     +  P +T
Sbjct: 1544 RTQSNNLSKTKPKSIKPVKVIKRKRLRRRQHKSIATTIRSPIQT 1587


>AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA,
            isoform A protein.
          Length = 1590

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 17   RTQFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKADAQVEGPNKT 148
            RTQ     K KPK + P +++K KR  R   +     +  P +T
Sbjct: 1545 RTQSNNLSKTKPKSIKPVKVIKRKRLRRRQHKSIATTIRSPIQT 1588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,718,887
Number of Sequences: 53049
Number of extensions: 479960
Number of successful extensions: 1044
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)