Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00867
(761 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 158 7e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 156 3e-39
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 143 2e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 141 9e-35
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 125 6e-30
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 66 7e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 61 1e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 61 2e-10
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.55
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.96
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 3.9
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 26 5.1
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.1
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 8.9
SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces pomb... 25 8.9
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 8.9
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 25 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 158 bits (384), Expect = 7e-40
Identities = 73/97 (75%), Positives = 84/97 (86%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEE 212
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTKR 538
GIFEVK+TAGDTHLGGEDFD+R+VNHF + + K+
Sbjct: 213 GIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKK 249
Score = 144 bits (348), Expect = 2e-35
Identities = 71/83 (85%), Positives = 75/83 (90%)
Frame = +1
Query: 511 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 690
QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARF
Sbjct: 241 QEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARF 300
Query: 691 EELNADLFRSTMEPVEKSLRDAK 759
EEL ADLFR TMEPVE+ LRD+K
Sbjct: 301 EELCADLFRKTMEPVERVLRDSK 323
Score = 138 bits (333), Expect = 1e-33
Identities = 63/87 (72%), Positives = 73/87 (83%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL KM+ETAE
Sbjct: 71 LIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAE 130
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
AYLG V +AV+TVPAYFNDSQRQ K
Sbjct: 131 AYLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 156 bits (379), Expect = 3e-39
Identities = 72/97 (74%), Positives = 84/97 (86%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEE 212
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTKR 538
GIFEVK+TAGDTHLGGEDFD+R+VNHF++ + K+
Sbjct: 213 GIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKK 249
Score = 144 bits (349), Expect = 1e-35
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = +1
Query: 511 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 690
QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARF
Sbjct: 241 QEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARF 300
Query: 691 EELNADLFRSTMEPVEKSLRDAK 759
EEL ADLFR+TMEPVEK LRD+K
Sbjct: 301 EELCADLFRNTMEPVEKVLRDSK 323
Score = 130 bits (314), Expect = 2e-31
Identities = 59/87 (67%), Positives = 71/87 (81%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL KM+E+AE
Sbjct: 71 LIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAE 130
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
A+LG V +AV+TVPAYFNDSQRQ K
Sbjct: 131 AFLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 143 bits (347), Expect = 2e-35
Identities = 67/96 (69%), Positives = 77/96 (80%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+
Sbjct: 157 RAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQG 216
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTK 535
G+FEV +TAGDTHLGGEDFDN +V HF + + K
Sbjct: 217 GVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQK 252
Score = 113 bits (273), Expect = 2e-26
Identities = 53/83 (63%), Positives = 69/83 (83%)
Frame = +1
Query: 511 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 690
QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ ++E+DSL GIDF +SITRARF
Sbjct: 245 QEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARF 304
Query: 691 EELNADLFRSTMEPVEKSLRDAK 759
E++NA F++T++PV K L+D+K
Sbjct: 305 EDINATTFKATIDPVAKVLKDSK 327
Score = 112 bits (270), Expect = 5e-26
Identities = 52/87 (59%), Positives = 65/87 (74%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLTKMKE +E
Sbjct: 75 LIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISE 134
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
A L K V+ AVITVPAYF+DSQR K
Sbjct: 135 AKLNKRVEKAVITVPAYFSDSQRAATK 161
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 141 bits (342), Expect = 9e-35
Identities = 61/90 (67%), Positives = 83/90 (92%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I++
Sbjct: 186 RQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDN 244
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHFSRS 517
G+FEV +T+GDTHLGGEDFDNR++N+ +R+
Sbjct: 245 GVFEVLATSGDTHLGGEDFDNRVINYLART 274
Score = 113 bits (271), Expect = 3e-26
Identities = 50/87 (57%), Positives = 69/87 (79%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+KMK+TAE
Sbjct: 104 LIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAE 163
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
AYLGK V +AV+TVPAYFND+QRQ K
Sbjct: 164 AYLGKPVTHAVVTVPAYFNDAQRQATK 190
Score = 81.4 bits (192), Expect = 1e-16
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 505 LFQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRA 684
L + + RK D+ + +A+ +L+ E+AKRTLSS IEI+S F G DF +++RA
Sbjct: 271 LARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRA 330
Query: 685 RFEELNADLFRSTMEPVEKSLRDA 756
+FEE+N DLF+ T++PVE+ L+D+
Sbjct: 331 KFEEINMDLFKKTLKPVEQVLKDS 354
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 125 bits (302), Expect = 6e-30
Identities = 58/94 (61%), Positives = 73/94 (77%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +
Sbjct: 199 RQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKN--DAIVAVFDLGGGTFDISILELNN 256
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGN 529
G+FEV+ST GDTHLGGEDFD +V H + + N
Sbjct: 257 GVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKN 290
Score = 87.4 bits (207), Expect = 2e-18
Identities = 41/87 (47%), Positives = 57/87 (65%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGR+F++ VQ D+K P+++V + KT+ P ++ +L+KM+ETA
Sbjct: 120 LIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGFILSKMRETAS 176
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
YLGK V+NAV+TVPAYFNDSQRQ K
Sbjct: 177 TYLGKDVKNAVVTVPAYFNDSQRQATK 203
Score = 48.4 bits (110), Expect = 1e-06
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +1
Query: 505 LFQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI----DFYTS 672
+ + FK+ DL+ ++ A++R+R A E+AK LSS ++ I + +
Sbjct: 283 IVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINME 342
Query: 673 ITRARFEELNADLFRSTMEPVEKSLRDA 756
I+RA+FE+L L R T++P +++L+DA
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDA 370
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 65.7 bits (153), Expect = 7e-12
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +2
Query: 263 DAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDG 430
+A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VSI+ G
Sbjct: 162 EAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRG 221
Query: 431 IFEVKSTAGDTHLGGEDFDNRMVNHFS 511
F +KST D +LG + D ++++F+
Sbjct: 222 QFHIKSTVCDRNLGSRNMDKALIDYFA 248
Score = 63.7 bits (148), Expect = 3e-11
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +1
Query: 514 EFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFE 693
EFK KYK D+ +N +A RL TA ER K+ LS++ A + ++ + ID + I R+ FE
Sbjct: 250 EFKEKYKIDVLSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFE 309
Query: 694 ELNADLFRSTMEPVEKSL 747
EL L P+EK+L
Sbjct: 310 ELIKPLLERLTPPIEKAL 327
Score = 43.2 bits (97), Expect = 4e-05
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 LIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 179
L GR ++D ++ + ++ G KV Y E+ F ++ + TK+K A
Sbjct: 74 LAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKAIA 133
Query: 180 EAYLGKTVQNAVITVPAYFNDSQRQ 254
EA L +V + VI++PA+F D QR+
Sbjct: 134 EAELIGSVSDVVISIPAWFTDIQRR 158
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 61.3 bits (142), Expect = 1e-10
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 511 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 690
+EF++K D N R+L +LR CE KR LS+ T AS +DSL +GIDF++SI R R+
Sbjct: 267 KEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRY 326
Query: 691 E 693
+
Sbjct: 327 D 327
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/85 (25%), Positives = 51/85 (60%)
Frame = +2
Query: 260 KDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 439
+ A +GL VL++I++P A +A ++ ++ V++ + G +VS+++++ G+
Sbjct: 183 ESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMT 242
Query: 440 VKSTAGDTHLGGEDFDNRMVNHFSR 514
+ ++ D +LGGE + +VN F++
Sbjct: 243 ILASVHDENLGGEQLTDVLVNFFAK 267
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 114 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQ 254
++K E S L ++ E+AE +LG V V++VP YF D+QR+
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRK 180
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +1
Query: 517 FKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEE 696
F +K+ DL+ N RAL RL R K LS++++A I+ L +GIDF ITR+ E
Sbjct: 279 FYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLES 338
Query: 697 LNADLFRSTMEPVEKSLRDA 756
L D+ + +EP+ K+L+ A
Sbjct: 339 LCKDMEDAAVEPINKALKKA 358
Score = 30.7 bits (66), Expect = 0.24
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 114 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 251
+++ + EE+ +M + AE + + + V+TVP +FN+ QR
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQR 176
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 527 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 652
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.96
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 486 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 376
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 486 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 340
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.2
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = -2
Query: 394 TAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGCL*ESLKYAGTVI 215
+++ + + S SS L T S S+S I S + F S + I
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618
Query: 214 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSAC 35
++ T+L + S + +S+ + S +LSS + + + SL+T S+
Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLSTYSSSVIPSSS 675
Query: 34 TVASSN 17
T+ SS+
Sbjct: 676 TLVSSS 681
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +2
Query: 338 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFS 511
LDK G+ I GG T SIL +GI VK E F+N F+
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKFT 105
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 479 DFDNRMVNHFSRSSRGNTKRTSLPTRELLGVCV 577
+F NR++N FS NT + L ELLG +
Sbjct: 831 EFRNRLINSFSGPLDKNTCQRLLTEAELLGFTI 863
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 440 VKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTKRTSL 547
V+ TA +T + G D +R FS SSR ++ +++L
Sbjct: 105 VRKTASNTSVAGSDSVSRDKIPFSASSRASSTKSTL 140
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/72 (25%), Positives = 29/72 (40%)
Frame = -3
Query: 474 PPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLMIR 295
PP S K P V VP P S S R P+L I+ + G+L+++
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473
Query: 294 RTFKPEMVPASF 259
+ ++ +F
Sbjct: 474 NHNQLSLLKCTF 485
>SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 416 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTKRTSLPTRELL 565
++E+G+ EV + G + DNR +H+SR S + ++P+ + L
Sbjct: 170 SLENGVEEVSKSLSWLETG-KTRDNRNNHHYSRKSSPHISSLAVPSTKHL 218
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 390 AVPSTCPSLPSRMVSSR*NPPPATPTW 470
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 476 EDFDNRMVNHFSRSSRGNTKRTSLPTREL 562
E F+ ++V+HF+ + N K S+P L
Sbjct: 549 ETFNEQIVSHFNLNDNNNNKVLSIPRDSL 577
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,209,068
Number of Sequences: 5004
Number of extensions: 66596
Number of successful extensions: 264
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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