Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00867
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 165 3e-41
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 159 2e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 4e-39
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 138 3e-33
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 96 3e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 68 1e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 49 4e-06
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.0
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.4
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.4
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 29 3.1
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 29 5.5
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 7.2
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 28 9.5
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.5
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 165 bits (401), Expect = 3e-41
Identities = 78/106 (73%), Positives = 89/106 (83%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIED
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIED 214
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTKRTSLPTRELL 565
GIFEVKSTAGDTHLGGEDFDN+MV+HF + + K+ P + +
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAM 260
Score = 146 bits (354), Expect = 2e-35
Identities = 68/83 (81%), Positives = 78/83 (93%)
Frame = +1
Query: 511 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 690
++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF
Sbjct: 243 KQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 302
Query: 691 EELNADLFRSTMEPVEKSLRDAK 759
EELN DLF+ T EPVE+++RD+K
Sbjct: 303 EELNQDLFKKTTEPVEQAIRDSK 325
Score = 135 bits (327), Expect = 3e-32
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAE
Sbjct: 73 LIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAE 132
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
AYLG V +AV+TVPAYF+DSQRQ K
Sbjct: 133 AYLGAKVTDAVVTVPAYFHDSQRQATK 159
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 159 bits (387), Expect = 2e-39
Identities = 79/114 (69%), Positives = 91/114 (79%), Gaps = 5/114 (4%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+D
Sbjct: 155 RQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDD 214
Query: 428 G-IFEVKSTAGDTHLGGEDFDNRMVNH----FSRSSRGNTKRTSLPTRELLGVC 574
G +FEVKSTAGDTHLGGEDFDNR+VNH F R + + + S R L C
Sbjct: 215 GSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTAC 268
Score = 138 bits (334), Expect = 5e-33
Identities = 64/87 (73%), Positives = 75/87 (86%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAE
Sbjct: 73 LIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAE 132
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
AYLG+ V +AVITVPAYFNDSQRQ K
Sbjct: 133 AYLGQKVTSAVITVPAYFNDSQRQATK 159
Score = 135 bits (326), Expect = 4e-32
Identities = 63/82 (76%), Positives = 74/82 (90%)
Frame = +1
Query: 514 EFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFE 693
EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE
Sbjct: 245 EFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFE 304
Query: 694 ELNADLFRSTMEPVEKSLRDAK 759
+L +DLF S ++PV K+L DAK
Sbjct: 305 DLCSDLFLSCLDPVNKALSDAK 326
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 158 bits (384), Expect = 4e-39
Identities = 77/106 (72%), Positives = 85/106 (80%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IED
Sbjct: 248 RQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIED 307
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTKRTSLPTRELL 565
GIFEVKST GDTHLGGEDFDN MV+ F + + K+ P + L
Sbjct: 308 GIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRAL 353
Score = 144 bits (350), Expect = 5e-35
Identities = 66/83 (79%), Positives = 79/83 (95%)
Frame = +1
Query: 511 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 690
++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARF
Sbjct: 336 KQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARF 395
Query: 691 EELNADLFRSTMEPVEKSLRDAK 759
EE+NA LF+ T+EPVEK+++D+K
Sbjct: 396 EEMNAHLFKKTLEPVEKAIKDSK 418
Score = 114 bits (274), Expect = 8e-26
Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV------------- 143
LIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 73 LIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEY 132
Query: 144 ------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQPQK 263
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQ K
Sbjct: 133 KGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 138 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQPQK 263
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQ K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 252
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 138 bits (335), Expect = 3e-33
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ TKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++
Sbjct: 853 RQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDN 911
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNHF 508
G+FEV +T GDTHLGGEDFD ++ HF
Sbjct: 912 GVFEVVATNGDTHLGGEDFDQNVMEHF 938
Score = 116 bits (278), Expect = 3e-26
Identities = 55/87 (63%), Positives = 68/87 (78%)
Frame = +3
Query: 3 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
LIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLTKMKETAE
Sbjct: 771 LIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAE 830
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQPQK 263
AYLGK V +AV+TVPAYFND+QRQ K
Sbjct: 831 AYLGKKVTHAVVTVPAYFNDAQRQATK 857
Score = 91.5 bits (217), Expect = 7e-19
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = +1
Query: 517 FKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEE 696
+K+K K++ + RA+++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEE
Sbjct: 942 YKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEE 1001
Query: 697 LNADLFRSTMEPVEKSLRDA 756
LNA LF+ST++PV+K L DA
Sbjct: 1002 LNAKLFKSTLKPVQKVLEDA 1021
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = +2
Query: 248 KTTTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 427
+ T A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 185 RNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQG 243
Query: 428 GIFEVKSTAGDTHLGGEDFDNRMVNH 505
G+F + AG+ LGG+DF+ R + +
Sbjct: 244 GMFVTMAMAGNNRLGGQDFNARFMQY 269
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +1
Query: 499 QPLFQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI--DSLFEG---IDF 663
Q L Q +++ + L T ++RLR E AK L+ + + +I++ SL EG + F
Sbjct: 268 QYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKF 326
Query: 664 YTSITRARFEELNADLFRSTMEPVEKSLRDAK 759
+I+R FE +N DLF+ ++P+ + L + +
Sbjct: 327 KETISRKMFETINEDLFKKVLQPIRRVLAEVE 358
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 IGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
IG+ F + K + F V +D G V KG PEE+ V+ K++ AE
Sbjct: 103 IGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAE 162
Query: 183 AYLGKTVQNAVITVPAYFNDSQR 251
L TV AV++VPA F+ QR
Sbjct: 163 RNLTTTVTKAVMSVPAEFDIKQR 185
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 IGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 182
IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+ T++K TAE
Sbjct: 130 IGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAE 189
Query: 183 AYLGKTVQNAVITVPAYFNDSQRQ 254
L V + VI+VP+Y+ D QR+
Sbjct: 190 IALKTKVTDCVISVPSYYTDRQRR 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +2
Query: 263 DAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE---RNVLIFDLGGGTFDVSILTIEDGI 433
DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V I G
Sbjct: 217 DASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQ 276
Query: 434 FEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTK 535
+V STA + +LGG DFD +V HF++ + K
Sbjct: 277 LKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYK 310
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 511 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRAR 687
QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+ E D + + RA+
Sbjct: 303 QEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQ 362
Query: 688 FEELNADLFRSTMEPVEKSL 747
FEEL ADL + P+ +L
Sbjct: 363 FEELAADLLKLVEAPLRSAL 382
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 72.9 bits (171), Expect = 3e-13
Identities = 29/44 (65%), Positives = 39/44 (88%)
Frame = +2
Query: 368 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 499
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLL 45
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 505 LFQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTS 672
L EFK++ DL+ + AL+RLR A E+AK LSSS Q I + +
Sbjct: 48 LIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMK 107
Query: 673 ITRARFEELNADLFRSTMEPVEKSLRDAK 759
++R++FE L ADL T+ P +K L+DA+
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAE 136
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +3
Query: 93 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQPQK 263
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQ K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/28 (82%), Positives = 23/28 (82%), Gaps = 2/28 (7%)
Frame = +2
Query: 290 VLRIINEPTAAAIAYGLDKK--GTGERN 367
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 92 VLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +1
Query: 505 LFQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSIT 678
L Q FK+ K+K ++ + RA+ + R K+ LS++ + +I+ +F+G DF +T
Sbjct: 223 LVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDFRVKVT 282
Query: 679 RARFEELNADLFRSTMEPVEKSLRDA 756
R EE+ DLF PV ++L+ A
Sbjct: 283 REELEEMCQDLFDRVAGPVNRALKSA 308
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 87 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQ 254
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERR 122
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 16/106 (15%)
Frame = +2
Query: 266 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------ 415
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTK 186
Query: 416 TIEDGIFE------VKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTK 535
T + GI E +K D LGG D R+ +H + + N K
Sbjct: 187 TKDRGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Frame = +1
Query: 505 LFQEFKR-----KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 669
L +FKR K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF
Sbjct: 202 LANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQG 261
Query: 670 SITR 681
++R
Sbjct: 262 QVSR 265
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/48 (35%), Positives = 34/48 (70%)
Frame = +2
Query: 359 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 502
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLD 200
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 317 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 484
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 365 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 484
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +2
Query: 305 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 484
N P A + GT E +I DLG G + + + E G V +TH+ G F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065
Query: 485 DNRM 496
R+
Sbjct: 3066 KIRV 3069
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 673 ITRARFEELNADLFRSTMEPVEKSLRDAK 759
++R++FE L ADL T+ P +K L+DA+
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAE 81
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 368 VLIFDLGGGTFDVSILTIEDGIFEVK 445
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 374 IFDLGGGTFDVSILTIEDGIFEV 442
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 504 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 334
+L +L P KW P D +S P V + + PP S + PF+S+P
Sbjct: 351 YLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGSAKPATQPFVSQP 406
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 465 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 349
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -2
Query: 451 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 284
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 283 ---ARDGTC 266
AR TC
Sbjct: 345 VYNARISTC 353
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -3
Query: 504 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AI 325
W+ KS K P +S + SS TSK PP + +ST SP A+
Sbjct: 1246 WMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNNAV 1303
Query: 324 AAAVGSLMIRRTF 286
A+ SL++ F
Sbjct: 1304 NVAISSLVLPSLF 1316
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 381 TSAAVPSTCPSLPSRMVSSR*NPPPATP 464
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 386 GGGTFDVSILTIEDGI-FEVKSTAGDTHLGGEDFDNRMVNHFSRSSRGNTKRTSLPTREL 562
GGG + ++ DG+ E+K TAG L ++ + R + N + +LP R +
Sbjct: 994 GGG---LRLVNTRDGVHLEIKRTAGHNVLLRASEPSQDLRDQQRDGQHNQREFNLPRRSM 1050
Query: 563 LGVCVLHVRGQRGPCHRPHKRALR*ILSLRV 655
G+ +L V K I S+RV
Sbjct: 1051 SGLLLLFVEPYTAGTRDSEKFVYPDIKSVRV 1081
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 634 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 753
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 181 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 8
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -3
Query: 504 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 334
+ +L P KW D T I +V PPPR + + +PF+S+P
Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 376 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 290
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,783,357
Number of Sequences: 59808
Number of extensions: 528833
Number of successful extensions: 1867
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1859
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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