Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00865
         (756 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096230-1|BAC04733.1|  253|Homo sapiens protein ( Homo sapiens ...    32   2.6  
AF297709-1|AAG17902.1|  786|Homo sapiens telomerase regulation-a...    32   2.6  
BC013376-1|AAH13376.1|  401|Homo sapiens MARVEL domain containin...    31   5.9  
BC011893-1|AAH11893.1|  401|Homo sapiens MARVEL domain containin...    31   5.9  
BC005052-1|AAH05052.1|  242|Homo sapiens MARVELD3 protein protein.     31   5.9  
AK056842-1|BAB71294.1|  410|Homo sapiens protein ( Homo sapiens ...    31   5.9  

>AK096230-1|BAC04733.1|  253|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38911 fis, clone NT2NE2007220. ).
          Length = 253

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -1

Query: 696 GWRPLCWRWCSMGWMTVR-STWTGW 625
           GWRPL W     GW   R   WTGW
Sbjct: 18  GWRPLPWGTHPAGWTEGRMDGWTGW 42


>AF297709-1|AAG17902.1|  786|Homo sapiens telomerase
           regulation-associated protein protein.
          Length = 786

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 21/77 (27%), Positives = 34/77 (44%)
 Frame = -3

Query: 235 DAARPGVGPCGAAAVHEAGADPDLGASYEVRPHLDRSVPHQKTLRDEDQAARLDGVLSFQ 56
           +AA PG GPC AAA    G+   +   Y+V+P  +      K      +  R   +L++ 
Sbjct: 22  EAACPGPGPCTAAARRATGSPVSIFV-YDVKPGAEEQTQVAKAAFKRFKTLRHPNILAYI 80

Query: 55  DCWDQEASTWSLTDFQT 5
           D  + E     +T+  T
Sbjct: 81  DGLETEKCLHVVTEAVT 97


>BC013376-1|AAH13376.1|  401|Homo sapiens MARVEL domain containing 3
           protein.
          Length = 401

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 126 ERSRWGRTSYDAPRSGSAPASWTAAAPHGPTPGRA 230
           E   W +      R G+   +W AAAP GP P  A
Sbjct: 103 EHGVWEKPRQSRTRDGARGLTWDAAAPPGPAPWEA 137


>BC011893-1|AAH11893.1|  401|Homo sapiens MARVEL domain containing 3
           protein.
          Length = 401

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 126 ERSRWGRTSYDAPRSGSAPASWTAAAPHGPTPGRA 230
           E   W +      R G+   +W AAAP GP P  A
Sbjct: 103 EHGVWEKPRQSRTRDGARGLTWDAAAPPGPAPWEA 137


>BC005052-1|AAH05052.1|  242|Homo sapiens MARVELD3 protein protein.
          Length = 242

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 126 ERSRWGRTSYDAPRSGSAPASWTAAAPHGPTPGRA 230
           E   W +      R G+   +W AAAP GP P  A
Sbjct: 126 EHGVWEKPRQSRTRDGARGLTWDAAAPPGPAPWEA 160


>AK056842-1|BAB71294.1|  410|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32280 fis, clone PROST2000176, weakly similar to
           RD PROTEIN. ).
          Length = 410

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 126 ERSRWGRTSYDAPRSGSAPASWTAAAPHGPTPGRA 230
           E   W +      R G+   +W AAAP GP P  A
Sbjct: 103 EHGVWEKPRQSRTRDGARGLTWDAAAPPGPAPWEA 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.131    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,001,949
Number of Sequences: 237096
Number of extensions: 1236569
Number of successful extensions: 4868
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4868
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)