Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00864
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   5.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.4  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    22   7.1  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    22   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.4  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 668 SFLLKHDNARCHTARGTTEYFEEV 739
           S +  HDNAR HT+  T +   E+
Sbjct: 117 SVVFHHDNARPHTSLVTRQKLLEL 140


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 20  RIVARRLQISHSCVSKVCKR 79
           R +A +L +SH+C+    K+
Sbjct: 87  REIAEKLHVSHTCIENHLKQ 106


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 674 LLKHDNARCHTARGTTE 724
           L+  D ARC +  GTT+
Sbjct: 37  LVAEDKARCMSEHGTTQ 53


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 674 LLKHDNARCHTARGTTE 724
           L+  D ARC +  GTT+
Sbjct: 37  LVAEDKARCMSEHGTTQ 53


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 722  QLFHGQCDNERYRA*EGSYHRHIPHRERHVP 630
            +L     ++E YR    S  R +P R   VP
Sbjct: 1343 RLAQDSSEDESYRGPSASGGRPVPERPERVP 1373


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,664
Number of Sequences: 438
Number of extensions: 4855
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)