Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00863
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.73 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.73 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.73 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.73 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.73 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   5.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -2

Query: 439 CKPRCGP*CYLAHDVCVNRLVLDEPPALNNTDFASSNIKW 320
           C  R G  C+  HD     L  + PP +   DF S    W
Sbjct: 427 CGLRNGDPCFF-HDTIPPYLFFESPPVVFLNDFISHQHAW 465


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -2

Query: 439 CKPRCGP*CYLAHDVCVNRLVLDEPPALNNTDFASSNIKW 320
           C  R G  C+  HD     L  + PP +   DF S    W
Sbjct: 427 CGLRNGDPCFF-HDTIPPYLFFESPPVVFLNDFISHQHAW 465


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -2

Query: 439 CKPRCGP*CYLAHDVCVNRLVLDEPPALNNTDFASSNIKW 320
           C  R G  C+  HD     L  + PP +   DF S    W
Sbjct: 427 CGLRNGDPCFF-HDTIPPYLFFESPPVVFLNDFISHQHAW 465


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -2

Query: 439 CKPRCGP*CYLAHDVCVNRLVLDEPPALNNTDFASSNIKW 320
           C  R G  C+  HD     L  + PP +   DF S    W
Sbjct: 427 CGLRNGDPCFF-HDTIPPYLFFESPPVVFLNDFISHQHAW 465


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 305 LGGIRPFYVRTCEVCVVQSWWFVQYQSIH 391
           L G+  +Y  TC++  +  +W     S+H
Sbjct: 306 LFGVLAYYSTTCDIATILDFWVRCVLSLH 334


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 356 EQHRLRKFEHKMGGCLRGLIWH 291
           E+HRL  F   +G  L    WH
Sbjct: 190 EEHRLAYFREDLGINLHHWHWH 211


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 441 YVNPDVVHDVIWRMTSA*IDWYWTN 367
           YV+   V   +W   +A  +  WTN
Sbjct: 527 YVDDSSVESRVWPRAAAAAERLWTN 551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,018
Number of Sequences: 336
Number of extensions: 1725
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)