Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00862
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.7  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 185 VRPSLIFNTSFINLCDCRINVCRCSYTIRLWKC 283
           V+PS+I  T F+  C C         TI L  C
Sbjct: 67  VQPSVITPTGFLKECYCCRESFLRERTITLTHC 99


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 630 SPPPPVATATRDAGPPLRCY 689
           S P   A A R+  PP  CY
Sbjct: 103 SSPDECARACREGEPPRICY 122


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 630 SPPPPVATATRDAGPPLRCY 689
           S P   A A R+  PP  CY
Sbjct: 103 SSPDECARACREGEPPRICY 122


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +3

Query: 567 PPPADSVVLPAVTGRCSDARRSPPPPVATAT 659
           PPPA       ++     +  + PPP  T++
Sbjct: 11  PPPAPQSAATPISSSGMTSPAAAPPPATTSS 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,294
Number of Sequences: 336
Number of extensions: 2736
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)