Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00862
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    29   0.15 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    29   0.15 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   3.2  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   4.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.3  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   9.6  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   9.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.6  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 29.1 bits (62), Expect = 0.15
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -2

Query: 722 SKYIAAASAPTIAPERRAR-VARRCSDWWRRAPSRVATA 609
           S  +AA+     A ER  R V   CSD W R P  VATA
Sbjct: 396 SGLLAASMVVCHAIERNGRPVLVHCSDGWDRTPQIVATA 434


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 29.1 bits (62), Expect = 0.15
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -2

Query: 722 SKYIAAASAPTIAPERRAR-VARRCSDWWRRAPSRVATA 609
           S  +AA+     A ER  R V   CSD W R P  VATA
Sbjct: 396 SGLLAASMVVCHAIERNGRPVLVHCSDGWDRTPQIVATA 434


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 316 STREHSTYPS*AFPQSYRVGASTNVNSAVAQINK 215
           S R  S+  S    + Y   AS ++NS+ AQIN+
Sbjct: 13  SMRRKSSIASSVLARHYINNASRSINSSCAQINE 46


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 594 PAVTGRCSDARRSPPPPVATATRDAGPPL 680
           P  T R +    +PP P  T+++   PP+
Sbjct: 323 PTTTHRLAARTSTPPDPETTSSQQCHPPV 351


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +3

Query: 567  PPPADSVVLPAVTGRCSDARRSPPPPVATATRDAG 671
            PPP   +  P      +  ++ P PP   A   AG
Sbjct: 919  PPPTHRLEQPPQVVAAAPTQQQPLPPAPAAASSAG 953


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 215 FINLCDCRINVCRCSYTIRLWKCSA 289
           ++  C C  +VC  S+ ++   C+A
Sbjct: 18  WLRSCSCHSSVCAVSFVMQCSTCNA 42


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 250 SMLLHDTIVEMLSSGTCC 303
           S+L H  IVE +S G CC
Sbjct: 129 SVLQHLCIVEGISVGICC 146


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 630  SPPPPVATATRDAGPPLRCYCWSGRRR 710
            SPPP   TA R A   LR   +  RRR
Sbjct: 1070 SPPPSPRTAARRADLRLRQARFRARRR 1096


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,354
Number of Sequences: 2352
Number of extensions: 13485
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)