Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00862
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 37 0.064
BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein. 37 0.064
AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. 37 0.064
AJ271791-1|CAC20424.1| 1800|Homo sapiens retinoid-acid induced p... 31 3.2
AJ271790-1|CAC20423.1| 1862|Homo sapiens retinoid-acid induced p... 31 3.2
AK055096-1|BAB70854.1| 155|Homo sapiens protein ( Homo sapiens ... 31 4.2
Z85995-1|CAI42721.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog... 30 7.3
Z83823-1|CAI42742.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog... 30 7.3
Z81008-1|CAI42710.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog... 30 7.3
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 30 7.3
AL031075-1|CAI43065.1| 2725|Homo sapiens odz, odd Oz/ten-m homol... 30 7.3
AL023878-1|CAI42975.1| 2725|Homo sapiens odz, odd Oz/ten-m homol... 30 7.3
AL022718-3|CAI42154.1| 2725|Homo sapiens odz, odd Oz/ten-m homol... 30 7.3
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 30 7.3
AF100772-1|AAF04723.1| 2725|Homo sapiens tenascin-M1 protein. 30 7.3
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 30 7.3
BC113741-1|AAI13742.1| 488|Homo sapiens mex-3 homolog D (C. ele... 30 9.7
BC113384-1|AAI13385.1| 489|Homo sapiens MEX3D protein protein. 30 9.7
AY950680-1|AAY34148.1| 651|Homo sapiens MEX3D protein. 30 9.7
AF458084-1|AAQ04763.1| 488|Homo sapiens bcl-2 ARE RNA binding p... 30 9.7
AB107353-1|BAC67658.1| 515|Homo sapiens KIAA2031 protein protein. 30 9.7
>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining
protein protein.
Length = 1836
Score = 37.1 bits (82), Expect = 0.064
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 528 SLDRHSFKLARVRPPPADSVVLPAVTGRCSDAR---RSPPPPVATATRDAGPPLR 683
S DRH+ + RPP A S P+V R + R + PPPPVAT+ GP R
Sbjct: 919 STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSR 970
>BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.
Length = 1773
Score = 37.1 bits (82), Expect = 0.064
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 528 SLDRHSFKLARVRPPPADSVVLPAVTGRCSDAR---RSPPPPVATATRDAGPPLR 683
S DRH+ + RPP A S P+V R + R + PPPPVAT+ GP R
Sbjct: 856 STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPEQQPPPPVATSQHHPGPQSR 907
>AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.
Length = 1783
Score = 37.1 bits (82), Expect = 0.064
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 528 SLDRHSFKLARVRPPPADSVVLPAVTGRCSDAR---RSPPPPVATATRDAGPPLR 683
S DRH+ + RPP A S P+V R + R + PPPPVAT+ GP R
Sbjct: 866 STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPEQQPPPPVATSQHHPGPQSR 917
>AJ271791-1|CAC20424.1| 1800|Homo sapiens retinoid-acid induced
protein 1 protein.
Length = 1800
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 573 PADSVVLPAVTGRCSDARRSPPPPVATATRDAGPP 677
P + P+ RC A + P PP+ AT+DA P
Sbjct: 1757 PVLATSTPSSWSRCVPAAKKPGPPLGAATKDASTP 1791
>AJ271790-1|CAC20423.1| 1862|Homo sapiens retinoid-acid induced
protein 1 protein.
Length = 1862
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 573 PADSVVLPAVTGRCSDARRSPPPPVATATRDAGPP 677
P + P+ RC A + P PP+ AT+DA P
Sbjct: 1756 PVLATSTPSSWSRCVPAAKKPGPPLGAATKDASTP 1790
>AK055096-1|BAB70854.1| 155|Homo sapiens protein ( Homo sapiens
cDNA FLJ30534 fis, clone BRAWH2001141. ).
Length = 155
Score = 31.1 bits (67), Expect = 4.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -2
Query: 710 AAASAPTIAPERRARVARRCSDWWRRAP-SRVAT-ATGDGGQHYTIG 576
AA A + E A RR WWR AP +R+AT G GG+ + +G
Sbjct: 53 AAEGAWVPSAEPAAHGRRRTVPWWRSAPATRLATPGRGPGGRGWDLG 99
>Z85995-1|CAI42721.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 HSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVAT 653
H+ AR PP ADS+ ++T R + +P PP +T
Sbjct: 201 HACTCARKPPPAADSLQRRSMTTRSQPSPAAPAPPTST 238
>Z83823-1|CAI42742.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 HSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVAT 653
H+ AR PP ADS+ ++T R + +P PP +T
Sbjct: 201 HACTCARKPPPAADSLQRRSMTTRSQPSPAAPAPPTST 238
>Z81008-1|CAI42710.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 HSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVAT 653
H+ AR PP ADS+ ++T R + +P PP +T
Sbjct: 201 HACTCARKPPPAADSLQRRSMTTRSQPSPAAPAPPTST 238
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 567 PPPADSVVLPAVTGRCSDARRSPPPPVATATRD-AGPP 677
PPP S+V P A PPPP A+ T D +G P
Sbjct: 919 PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSP 956
>AL031075-1|CAI43065.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 HSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVAT 653
H+ AR PP ADS+ ++T R + +P PP +T
Sbjct: 201 HACTCARKPPPAADSLQRRSMTTRSQPSPAAPAPPTST 238
>AL023878-1|CAI42975.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 HSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVAT 653
H+ AR PP ADS+ ++T R + +P PP +T
Sbjct: 201 HACTCARKPPPAADSLQRRSMTTRSQPSPAAPAPPTST 238
>AL022718-3|CAI42154.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 HSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVAT 653
H+ AR PP ADS+ ++T R + +P PP +T
Sbjct: 201 HACTCARKPPPAADSLQRRSMTTRSQPSPAAPAPPTST 238
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 567 PPPADSVVLPAVTGRCSDARRSPPPPVATATRD-AGPP 677
PPP S+V P A PPPP A+ T D +G P
Sbjct: 919 PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSP 956
>AF100772-1|AAF04723.1| 2725|Homo sapiens tenascin-M1 protein.
Length = 2725
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 HSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVAT 653
H+ AR PP ADS+ ++T R + +P PP +T
Sbjct: 201 HACTCARKPPPAADSLQRRSMTTRSQPSPAAPAPPTST 238
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 567 PPPADSVVLPAVTGRCSDARRSPPPPVATATRD-AGPP 677
PPP S+V P A PPPP A+ T D +G P
Sbjct: 905 PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSP 942
>BC113741-1|AAI13742.1| 488|Homo sapiens mex-3 homolog D (C.
elegans) protein.
Length = 488
Score = 29.9 bits (64), Expect = 9.7
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 516 FDKSSLDRHSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVATATRDAG 671
FD +LD A + P + LPA +G CS +P PP A A R +G
Sbjct: 279 FDFLALDLTVPAAATIWAPFERAAPLPAFSG-CSTVNGAPGPPAAGARRSSG 329
>BC113384-1|AAI13385.1| 489|Homo sapiens MEX3D protein protein.
Length = 489
Score = 29.9 bits (64), Expect = 9.7
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 516 FDKSSLDRHSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVATATRDAG 671
FD +LD A + P + LPA +G CS +P PP A A R +G
Sbjct: 280 FDFLALDLTVPAAATIWAPFERAAPLPAFSG-CSTVNGAPGPPAAGARRSSG 330
>AY950680-1|AAY34148.1| 651|Homo sapiens MEX3D protein.
Length = 651
Score = 29.9 bits (64), Expect = 9.7
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 516 FDKSSLDRHSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVATATRDAG 671
FD +LD A + P + LPA +G CS +P PP A A R +G
Sbjct: 457 FDFLALDLTVPAAATIWAPFERAAPLPAFSG-CSTVNGAPGPPAAGARRSSG 507
>AF458084-1|AAQ04763.1| 488|Homo sapiens bcl-2 ARE RNA binding
protein protein.
Length = 488
Score = 29.9 bits (64), Expect = 9.7
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 516 FDKSSLDRHSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVATATRDAG 671
FD +LD A + P + LPA +G CS +P PP A A R +G
Sbjct: 279 FDFLALDLTVPAAATIWAPFERAAPLPAFSG-CSTVNGAPGPPAAGARRSSG 329
>AB107353-1|BAC67658.1| 515|Homo sapiens KIAA2031 protein protein.
Length = 515
Score = 29.9 bits (64), Expect = 9.7
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 516 FDKSSLDRHSFKLARVRPPPADSVVLPAVTGRCSDARRSPPPPVATATRDAG 671
FD +LD A + P + LPA +G CS +P PP A A R +G
Sbjct: 321 FDFLALDLTVPAAATIWAPFERAAPLPAFSG-CSTVNGAPGPPAAGARRSSG 371
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,269,622
Number of Sequences: 237096
Number of extensions: 1860000
Number of successful extensions: 6078
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6033
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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