Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00861
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA...    31   1.8  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    31   1.8  
AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro...    31   2.4  
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA...    31   2.4  
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC...    30   4.2  
Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.    29   5.6  
X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like ...    29   5.6  
M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein p...    29   5.6  
D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.    29   5.6  
BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p pro...    29   5.6  
AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain ...    29   5.6  
AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz prote...    29   5.6  
AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz produ...    29   5.6  
AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-P...    29   5.6  
AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-P...    29   5.6  
AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-P...    29   5.6  
AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB...    29   5.6  
AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball p...    29   9.7  
AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA...    29   9.7  

>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
           protein.
          Length = 2112

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 136 EVSQKPATCVPGSVYNQGCNVCRCTDEGRHATCTL 240
           ++ Q P TC PG+V+NQ   VC    E +   C +
Sbjct: 463 KLEQVPFTCGPGTVWNQVDKVCDLPTEDQKKKCNI 497


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
            protein.
          Length = 1286

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 25/87 (28%), Positives = 30/87 (34%)
 Frame = +2

Query: 53   TSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTIRAATYAAVLTRADTPL 232
            T+P      T S  TT    ST T    +   + PR+   P T R  T     T   T  
Sbjct: 1086 TTPRSTTTTTTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTS 1145

Query: 233  AP*CDAPREGGDACARPGSRFSLQPRR 313
             P    PR     C  P +  S  P R
Sbjct: 1146 RPTTTTPRSTTTPC--PTTTPSASPTR 1170



 Score = 30.3 bits (65), Expect = 3.2
 Identities = 22/77 (28%), Positives = 28/77 (36%)
 Frame = +2

Query: 26   SVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTIRAATYAA 205
            + S  R   T+P      T S  TT    ST T    +   + PR+    ST R  T   
Sbjct: 1013 TTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPSTSRPTTTTPRSTTTTSTSRPTTTTP 1072

Query: 206  VLTRADTPLAP*CDAPR 256
              T   +  AP    PR
Sbjct: 1073 RSTTKTSTCAPTTTTPR 1089



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 22/81 (27%), Positives = 27/81 (33%)
 Frame = +2

Query: 32  SAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTIRAATYAAVL 211
           S  R   T+P      + S  TT    ST T    +   + PR+    ST R  T     
Sbjct: 375 STSRPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTRRPTTTTPRSTTTTSTSRPTTTTPRS 434

Query: 212 TRADTPLAP*CDAPREGGDAC 274
           T   T   P    PR     C
Sbjct: 435 TTTTTTSRPTTTTPRSTTTTC 455


>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
           protein.
          Length = 1071

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +3

Query: 237 LDAMPPEKEETHAHDQDPGFRC-NPGEQFTRDCNDCTCSADGKSVFCTLRLC 389
           L+   P     HAH   PG R    G  F  +CN C+C A    + CT + C
Sbjct: 663 LEQCQPLPSYMHAHCTLPGARSYRHGSSFYLECNLCSCFAG--EITCTKQQC 712


>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
           protein.
          Length = 1071

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +3

Query: 237 LDAMPPEKEETHAHDQDPGFRC-NPGEQFTRDCNDCTCSADGKSVFCTLRLC 389
           L+   P     HAH   PG R    G  F  +CN C+C A    + CT + C
Sbjct: 663 LEQCQPLPSYMHAHCTLPGARSYRHGSSFYLECNLCSCFAG--EITCTKQQC 712


>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
           protein.
          Length = 4699

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 316 CSPGLQRKPGSWSCACVSSFSGGIASRCK 230
           C    +  PGS+ C+CVS ++    +RC+
Sbjct: 208 CDQVCRNTPGSYECSCVSGYAKTKGNRCR 236


>Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.
          Length = 1403

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like
           protein protein.
          Length = 2515

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 300 CNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQDITPH 410
           C+    F  D   CTC A      C+  LCD D   H
Sbjct: 435 CSGHGTFDLDTQTCTCEAKWSGDDCSKELCDLDCGQH 471


>M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein
           protein.
          Length = 1407

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.
          Length = 1403

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p
           protein.
          Length = 1374

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain
           transcription factorProspero protein.
          Length = 1403

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz protein
           protein.
          Length = 2731

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 300 CNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQDITPH 410
           C+    F  D   CTC A      C+  LCD D   H
Sbjct: 651 CSGHGTFDLDTQTCTCEAKWSGDDCSKELCDLDCGQH 687


>AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz product
           protein.
          Length = 2731

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 300 CNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQDITPH 410
           C+    F  D   CTC A      C+  LCD D   H
Sbjct: 651 CSGHGTFDLDTQTCTCEAKWSGDDCSKELCDLDCGQH 687


>AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-PD,
           isoform D protein.
          Length = 1374

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-PC,
           isoform C protein.
          Length = 1403

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-PA,
           isoform A protein.
          Length = 1535

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 306 GCNENLDPGRAHASPPS-LGASHQGASGVSALVSTAAYVAALIVDGAGNAR 157
           G N ++ PG AH+S  S  G S +G+  VSA    +   AA  V G    R
Sbjct: 150 GTNASISPGSAHSSSHSHQGVSPKGSRRVSACSDRSLEAAAADVAGGSPPR 200


>AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB
           protein.
          Length = 2731

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 300 CNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQDITPH 410
           C+    F  D   CTC A      C+  LCD D   H
Sbjct: 651 CSGHGTFDLDTQTCTCEAKWSGDDCSKELCDLDCGQH 687


>AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball
           protein.
          Length = 942

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -2

Query: 286 SWSCACVSSFSGGIASRCKWRVGPRQYSGIRCSPDCRRSRERTWL 152
           SWSC  +  FSG +A  C     PR Y     S DC     R W+
Sbjct: 657 SWSCVVI--FSGHLAPVCFVVFAPRGYYFATASDDC---TARVWM 696


>AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA
           protein.
          Length = 942

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -2

Query: 286 SWSCACVSSFSGGIASRCKWRVGPRQYSGIRCSPDCRRSRERTWL 152
           SWSC  +  FSG +A  C     PR Y     S DC     R W+
Sbjct: 657 SWSCVVI--FSGHLAPVCFVVFAPRGYYFATASDDC---TARVWM 696


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,108,727
Number of Sequences: 53049
Number of extensions: 732413
Number of successful extensions: 2913
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2911
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)