Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00861
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 33 0.18
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 33 0.18
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 32 0.55
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 32 0.55
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 31 0.72
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 31 0.72
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 30 1.7
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 29 3.9
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 29 3.9
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 29 3.9
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 29 3.9
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 29 3.9
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 29 5.1
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 29 5.1
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 29 5.1
AJ561207-1|CAD99209.1| 139|Caenorhabditis elegans NAS-14 protei... 29 5.1
Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical pr... 28 8.9
AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein. 28 8.9
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +1
Query: 19 CNKCLCDKEGKDFSCTRMDCNALNSNHNAEPFNGDR---TKREVSQKPATCVPGSVYNQG 189
C K C + D +C DCN + +G R +K A V NQ
Sbjct: 638 CEKRKCSERANDGNCDA-DCNYAACKFDGGDCSGKREPFSKCRYGNMCADFFANGVCNQA 696
Query: 190 CNVCRCTDEGRHATCTLMRCP 252
CN C +G ++RCP
Sbjct: 697 CNNEECLYDGMDCLPAVVRCP 717
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 25 KCLCDKEGKDFSCTRMDCNALNSNHNAEP-----FNGDRTKREVSQKPATCVPGSVYNQG 189
KC+ DK+ + +C DC+ +N N +P + GD K + P+ C+ G
Sbjct: 74 KCVFDKDYRMETCVCKDCD-INGNSLLKPSCPSGYGGDDCKTQGWCYPSVCMNGGQCIGA 132
Query: 190 CN--VCRCTDEGRHATCTL 240
N C C D + C L
Sbjct: 133 GNRAKCACPDGFKGERCEL 151
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +1
Query: 19 CNKCLCDKEGKDFSCTRMDCNALNSNHNAEPFNGDR---TKREVSQKPATCVPGSVYNQG 189
C K C + D +C DCN + +G R +K A V NQ
Sbjct: 638 CEKRKCSERANDGNCDA-DCNYAACKFDGGDCSGKREPFSKCRYGNMCADFFANGVCNQA 696
Query: 190 CNVCRCTDEGRHATCTLMRCP 252
CN C +G ++RCP
Sbjct: 697 CNNEECLYDGMDCLPAVVRCP 717
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 25 KCLCDKEGKDFSCTRMDCNALNSNHNAEP-----FNGDRTKREVSQKPATCVPGSVYNQG 189
KC+ DK+ + +C DC+ +N N +P + GD K + P+ C+ G
Sbjct: 74 KCVFDKDYRMETCVCKDCD-INGNSLLKPSCPSGYGGDDCKTQGWCYPSVCMNGGQCIGA 132
Query: 190 CN--VCRCTDEGRHATCTL 240
N C C D + C L
Sbjct: 133 GNRAKCACPDGFKGERCEL 151
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +1
Query: 73 DCNALNSNHNAEPFNGDRTKREVSQKPATCVP---GSVYNQGCNVCRCTDEGRHATCTLM 243
+CN N + +G + Q PA C V NQ CN C +G L
Sbjct: 513 ECNLEECNFDGGDCSGGQRPFSKCQYPARCADQFANGVCNQECNNEECLYDGLDCQSELF 572
Query: 244 RCP 252
RCP
Sbjct: 573 RCP 575
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +1
Query: 73 DCNALNSNHNAEPFNGDRTKREVSQKPATCVP---GSVYNQGCNVCRCTDEGRHATCTLM 243
+CN N + +G + Q PA C V NQ CN C +G L
Sbjct: 513 ECNLEECNFDGGDCSGGQRPFSKCQYPARCADQFANGVCNQECNNEECLYDGLDCQSELF 572
Query: 244 RCP 252
RCP
Sbjct: 573 RCP 575
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +1
Query: 73 DCNALNSNHNAEPFNGDRTKREVSQKPATCVP---GSVYNQGCNVCRCTDEGRHATCTLM 243
+CN N + +G + Q PA C V NQ CN C +G L
Sbjct: 513 ECNLEECNFDGGDCSGGQRPFSKCQYPARCADQFANGVCNQECNNEECLYDGLDCQSELF 572
Query: 244 RCP 252
RCP
Sbjct: 573 RCP 575
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 76 CNALNSNHNAEPFNGDRTKREVSQKPATCVPGSVYNQGCNVCRCTD 213
C A N A+ FNG R ++ + + A CV G N+ N C+C D
Sbjct: 187 CVAPNQCSCADGFNGTRCEQCLPR--AGCVNGDCVNETPNTCKCRD 230
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 76 CNALNSNHNAEPFNGDRTKREVSQKPATCVPGSVYNQGCNVCRCTD 213
C A N A+ FNG R ++ + + A CV G N+ N C+C D
Sbjct: 187 CVAPNQCSCADGFNGTRCEQCLPR--AGCVNGDCVNETPNTCKCRD 230
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical
protein ZK1193.2 protein.
Length = 1250
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 300 CNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQD 398
C G + + N CTC ++ FC + +CD++
Sbjct: 566 CQNGGYLSANLNKCTCPSNFGGQFCEMPICDRN 598
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 26 SVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPS-TIRAATYA 202
+V + + + TS TLST TT PST T + V S +A P+PS T + +T
Sbjct: 555 TVVSTKSSTTSSTTTKPTTLSTTTTTQVPSTTTSVT---VPSTQKATPSPSRTTKKSTTT 611
Query: 203 AVLTRADTPLAP 238
T P
Sbjct: 612 TSTTATPRQATP 623
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 327 DCNDCTCSADGKSVFCTLRLCDQDI 401
DC C CSA+G S C CD+ +
Sbjct: 688 DCTSCVCSAEG-SADCYKEACDESL 711
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 327 DCNDCTCSADGKSVFCTLRLCDQDI 401
DC C CSA+G S C CD+ +
Sbjct: 622 DCTSCVCSAEG-SADCYKEACDESL 645
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 327 DCNDCTCSADGKSVFCTLRLCDQDI 401
DC C CSA+G S C CD+ +
Sbjct: 688 DCTSCVCSAEG-SADCYKEACDESL 711
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 327 DCNDCTCSADGKSVFCTLRLCDQDI 401
DC C CSA+G S C CD+ +
Sbjct: 622 DCTSCVCSAEG-SADCYKEACDESL 645
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 327 DCNDCTCSADGKSVFCTLRLCDQDI 401
DC C CSA+G S C CD+ +
Sbjct: 622 DCTSCVCSAEG-SADCYKEACDESL 645
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 327 DCNDCTCSADGKSVFCTLRLCDQDI 401
DC C CSA+G S C CD+ +
Sbjct: 622 DCTSCVCSAEG-SADCYKEACDESL 645
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 47 AKTSPALVWIATLSTVTTMLSPSTATELKEK 139
+KTS T +T TT P+T TE++EK
Sbjct: 315 SKTSSTTTTTTTTTTTTTTEEPTTTTEVEEK 345
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 40 KEGKDFSCTRMDCNALNSNHNAEPFNGDRTKREVSQKPATC 162
K G F C CN S HNA + + T S PA+C
Sbjct: 185 KTGFGFDCPVSQCNMQFSQHNALRAHLEETHTISSTNPASC 225
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 40 KEGKDFSCTRMDCNALNSNHNAEPFNGDRTKREVSQKPATC 162
K G F C CN S HNA + + T S PA+C
Sbjct: 185 KTGFGFDCPVSQCNMQFSQHNALRAHLEETHTISSTNPASC 225
>AJ561207-1|CAD99209.1| 139|Caenorhabditis elegans NAS-14 protein
protein.
Length = 139
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 47 AKTSPALVWIATLSTVTTMLSPSTATELKEK 139
+KTS T +T TT P+T TE++EK
Sbjct: 99 SKTSSTTTTTTTTTTTTTTEEPTTTTEVEEK 129
>Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical
protein F57B7.4 protein.
Length = 509
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 276 AHASPPSLGASHQGASGVSALVSTAAYVAALIVDGAGNARGWL 148
AH SLGA H GA + S Y+ A+ V G+ + + +L
Sbjct: 301 AHEIGHSLGALHDGAYETAECDSNDNYLMAVAVSGSADRQSFL 343
>AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein.
Length = 509
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 276 AHASPPSLGASHQGASGVSALVSTAAYVAALIVDGAGNARGWL 148
AH SLGA H GA + S Y+ A+ V G+ + + +L
Sbjct: 301 AHEIGHSLGALHDGAYETAECDSNDNYLMAVAVSGSADRQSFL 343
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,572,423
Number of Sequences: 27780
Number of extensions: 373085
Number of successful extensions: 1197
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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