Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00860
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_55406| Best HMM Match : DUF1534 (HMM E-Value=0.45) 33 0.20
SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_57139| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 33 0.26
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 32 0.46
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 32 0.46
SB_58558| Best HMM Match : EGF (HMM E-Value=0) 32 0.61
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_4760| Best HMM Match : EGF (HMM E-Value=8.29989e-42) 32 0.61
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 0.80
SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 31 1.1
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 31 1.4
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 31 1.4
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 31 1.4
SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 31 1.4
SB_20264| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 30 1.8
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 30 1.8
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 30 1.8
SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3) 30 2.4
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 30 2.4
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_16879| Best HMM Match : Stig1 (HMM E-Value=1) 29 3.2
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 29 4.3
SB_39510| Best HMM Match : VWA (HMM E-Value=0) 29 4.3
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43) 29 4.3
SB_34550| Best HMM Match : VWA (HMM E-Value=0) 29 4.3
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 29 4.3
SB_1891| Best HMM Match : EGF (HMM E-Value=6.5e-15) 29 4.3
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 29 5.6
SB_12687| Best HMM Match : EGF_2 (HMM E-Value=0.22) 29 5.6
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 29 5.6
SB_11540| Best HMM Match : EGF (HMM E-Value=1.5e-25) 29 5.6
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_48837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_36080| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 28 7.5
SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34) 28 7.5
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_47465| Best HMM Match : EGF_CA (HMM E-Value=2.4e-08) 28 9.9
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_1752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0) 28 9.9
SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_48092| Best HMM Match : PMG (HMM E-Value=7.6) 28 9.9
SB_38843| Best HMM Match : Dickkopf_N (HMM E-Value=0.28) 28 9.9
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_22258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 129 CRTDDNCADNSRCIRGQCVDACKAEPCGINATC 227
C TD C SRC+ G CV+ A PC + TC
Sbjct: 49 CSTDHECNQESRCVLGICVNCSSAFPC-LKKTC 80
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 27 CRPAEGRIIDSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCV 185
C + I GRC C + G+I G +C C D C N+ C++G CV
Sbjct: 507 CEKCDINAICVHGRCKCRA--GYIGNGYECEKEEC---DGCNPNAHCLKGVCV 554
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 14/78 (17%)
Frame = +3
Query: 63 GRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCV--------------DACKA 200
GRC+C + G+ G C CR C+ N+ CI G CV + C
Sbjct: 230 GRCIC--QMGY--HGQHCENDRCRF---CSVNADCILGHCVCKDGYHGDGKTCNKNVCHP 282
Query: 201 EPCGINATCDAVGHRSHC 254
PC ATC A C
Sbjct: 283 NPCHNGATCVATDSSFDC 300
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 126 GCRTDDNCADNSRCIRGQCVDACKAEPC 209
GCR+DD CA C+RGQC D A C
Sbjct: 1645 GCRSDDACAVRP-CMRGQCSDDWNAFKC 1671
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCADNSRCI-RG-QC---VDACKAEPCGINATCDAVGHRSHC 254
D+C+ + C + + C+ +G C ++ C + PC NATC+ + + C
Sbjct: 858 DECLLAAVDPNKRCENGATCVDKGFNCSEDINECLSTPCQHNATCNDLVNDFSC 911
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 66 RCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATC 227
RCVC+ G++ G KC A G C N++CI A P G N TC
Sbjct: 1223 RCVCNP--GYLGDGRKCTADGTCEGVKCDPNAKCI--------AASPSGENRTC 1266
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +3
Query: 15 ECIPCRPAEGRIIDSRGRCVC-DSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDA 191
+C EG++ D G CV ++ G + +C G C D C++G C
Sbjct: 1319 DCKSDGTCEGKVCDFNGECVAKNNSDGETERTCRCKEGFEGDGIICTDQDECLKGPCPQN 1378
Query: 192 CK 197
K
Sbjct: 1379 AK 1380
>SB_55406| Best HMM Match : DUF1534 (HMM E-Value=0.45)
Length = 248
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 105 GDKCVAGGCRTDDNCADNSRCIR--GQCVDACKAEPCGINATC 227
G C G C+TD C RCI C+ +EPC C
Sbjct: 45 GSLCGLGRCQTDSECVARYRCIHRDNLCLRCSPSEPCPSGYVC 87
>SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +3
Query: 42 GRIIDSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINA 221
G+ I++ G C RGF + D+ C D C + C G+C + A C N
Sbjct: 379 GQCINNIGSFTCTCRRGFTLSLDRT---RCDDMDECREKDVCKNGRCQNVNGAFRCICNK 435
Query: 222 TCDAVGHRSHCL 257
+ R+ C+
Sbjct: 436 GYELSSDRTQCV 447
>SB_57139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Frame = +3
Query: 33 PAEGRIIDSRGRCVCDSERGFIIQG-----DKCVA--GGCRTDDNCADNSRCIRGQCVDA 191
PA R I++ G C G+ QG D+C A G C C + R Q ++
Sbjct: 275 PANARCINTPGSYHCACVNGYTGQGTCMDVDECAADDGLCHKGTTCVNTMGSYRCQDINE 334
Query: 192 CKAEPCGINATC 227
C +PC C
Sbjct: 335 CLTDPCFEGEIC 346
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 12 GECIPCRPAEGRIIDSRGRCVC-DSERGFIIQGD-KCVAGGCRTDDNCADNSRC 167
G C P D C C D+E+ ++ G+ C+AG C + CA N+ C
Sbjct: 242 GRCDQRCPVGTYGFDCAKVCACADTEKCSVVSGECTCIAGSCSSSCPCAGNATC 295
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 69 CVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCV 185
CVC+ G+ G +C C D+C NS C+RG CV
Sbjct: 795 CVCNP--GYTGDGHQCQPDTC---DSCPPNSHCMRGVCV 828
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 32.3 bits (70), Expect = 0.46
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Frame = +3
Query: 24 PCRPAEGRIIDSRGRCVCDSERGFI-----IQGDKCVAGGCRTDDNCAD-----NSRCIR 173
PC G +D R R C GF + D C C+ C D C
Sbjct: 94 PCLN-NGTCVDGRNRVTCTCAVGFTGQFCEVNIDDCDPAPCQNYGTCQDLVADFTCHCYP 152
Query: 174 G----QC---VDACKAEPCGINATC 227
G C +D C+A PC NATC
Sbjct: 153 GFTGETCATPIDLCEAHPCQNNATC 177
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +3
Query: 66 RCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATC 227
R + D E + G CV +C + + +D C ++PC ATC
Sbjct: 236 RSIDDCEHAHCLNGATCVDSDNAYKCSCLEGYYGKHCELIDRCHSQPCQNGATC 289
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 32.3 bits (70), Expect = 0.46
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Frame = +3
Query: 24 PCRPAEGRIIDSRGRCVCDSERGFI-----IQGDKCVAGGCRTDDNCAD-----NSRCIR 173
PC G +D R R C GF + D C C+ C D C
Sbjct: 907 PCLN-NGTCVDGRNRVTCTCAVGFTGQFCEVNIDDCDPAPCQNYGTCQDLVADFTCHCYP 965
Query: 174 G----QC---VDACKAEPCGINATC 227
G C +D C+A PC NATC
Sbjct: 966 GFTGETCATPIDLCEAHPCQNNATC 990
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +3
Query: 66 RCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATC 227
R + D E + G CV +C + + +D C ++PC ATC
Sbjct: 1049 RSIDDCEHAHCLNGATCVDSDNAYKCSCLEGYYGKHCELIDRCHSQPCQNGATC 1102
>SB_58558| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 RIIDSRGRCVCDSERGFIIQG-DKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGIN 218
RI R +SE +QG D C CR + C D R QC + C IN
Sbjct: 139 RISKKRYEIRRNSEYYCYLQGIDDCAPSPCRNNGTCTDMHNAYRCQCTQGFVGKNCQIN 197
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = +3
Query: 21 IPCRPAEGRIIDSRG----RCVCDSERGFIIQGDKCVAG--GCRTDDNCADNSRCI 170
+ CR E D G R +CD ER + D+ G GC +D+ N +CI
Sbjct: 468 VKCRKNERMCADGNGCVHRRWICDGERDCLDGSDEAGCGTIGCSSDEFTCTNQKCI 523
>SB_4760| Best HMM Match : EGF (HMM E-Value=8.29989e-42)
Length = 240
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +3
Query: 57 SRGRCVCDSERGFIIQGDKCVA--GGCRTDDNCADNSRCIRGQCVDACKAEPCGINATCD 230
S+G+C ++ + G KCV G + +C R +D C + PC ATC+
Sbjct: 75 SQGKC----QKNPCMNGGKCVETLSGTGYECSCPSGYRGEVCDVIDNCLSNPCQNGATCN 130
Query: 231 AVGHRSHCLALP 266
+V C P
Sbjct: 131 SVAGGFTCTCTP 142
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 114 CVAGGCRTDDNCADNSRCIRGQCVDA-CKAEPCGINATC 227
CV C D C D S C+ G CVDA C PC ++ +C
Sbjct: 469 CVESPC-VDGPCVD-SPCVDGPCVDAPCVDSPC-VDGSC 504
>SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 114 CVAGGCRTDDNCADNSRCIRGQCVDA-CKAEPCGINATC 227
CV C D C D S C+ G CVDA C PC ++ +C
Sbjct: 160 CVESPC-VDGPCVD-SPCVDGPCVDAPCVDSPC-VDGSC 195
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 12/65 (18%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCADN-----SRCIRG----QC---VDACKAEPCGINATCDAVGHRSH 251
++C + CR + C D RC+ G C V+ C +EPC NATC
Sbjct: 7049 NECNSNPCRNNGTCVDGINGFTCRCLEGYIGAHCEVDVNYCDSEPCMNNATCVDEQDGFT 7108
Query: 252 CLALP 266
C+ P
Sbjct: 7109 CICAP 7113
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Frame = +3
Query: 66 RCVC-DSERGFIIQ--GDKCVAGGCRTDDNCADNSR-----CIRG----QC---VDACKA 200
+C+C G + Q D C A CR +C DN R C G C V C++
Sbjct: 1096 QCICRPGFSGTLCQFNDDDCSAKPCRNGGSCIDNERFYTCACPAGYTGKNCETEVQECQS 1155
Query: 201 EPCGINATCDAVGHRSHCLALP 266
EPC TC + C P
Sbjct: 1156 EPCQHGGTCTKRFNGYECSCAP 1177
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPC 209
D+ VA ++D C+ N RGQCVD K C
Sbjct: 1634 DRLVAPNVNSND-CSSNPCRSRGQCVDRLKGYSC 1666
Score = 25.4 bits (53), Expect(2) = 2.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 183 VDACKAEPCGINATCDAVGH 242
VD C + PC NA C VGH
Sbjct: 933 VDECASNPCQNNAVC--VGH 950
Score = 23.0 bits (47), Expect(2) = 2.1
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +3
Query: 147 CADNSRCIRGQCVDACKAEPC 209
C+ + C+RG CV+ C
Sbjct: 898 CSTQNPCVRGTCVEQSGGAHC 918
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Frame = +3
Query: 18 CIPCRPAEGRIIDSRGRCVCDSERGFIIQG----DKCVAGGCRTDDNCADNSRCIRGQCV 185
C+ G + S G C+ G++ + D C C +C + +C
Sbjct: 775 CMRLACVHGACVSSNGVVRCECSAGYLGKSCNMTDPCEPSPCLNGGSCTKSGLAHSCECT 834
Query: 186 DACKAEPCGINATC-DAVGHRSHCL 257
+ C I C DA HC+
Sbjct: 835 PGYEGANCSITKRCGDAPCRHGHCV 859
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 GFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDA-CKAEPCGINATCDAVGHRSHC 254
G I KC C C N CI G+CV A C + C N TC G + C
Sbjct: 64 GQICNSAKCNLQ-CAVKQEC--NQTCIAGRCVSAVCSSRMC--NQTCIRAGCKMEC 114
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 GFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDA-CKAEPCGINATCDAVGHRSHC 254
G I KC C C N CI G+CV A C + C N TC G + C
Sbjct: 64 GQICNSAKCNLQ-CAVKQEC--NQTCIAGRCVSAVCSSRMC--NQTCIRAGCKMEC 114
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 114 CVAGGCRTDDNCAD---NSRCIRGQCVDACKAEPCGINATCDAVGHRSHCLA 260
C+AG C C+ N CIR C C E C + TC + G C A
Sbjct: 86 CIAGRC-VSAVCSSRMCNQTCIRAGCKMECYGEEC--HQTCQSSGCDVTCPA 134
>SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1120
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 45 RIIDSRGRCV--CDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGIN 218
R +D G CV C ++ G KC + GC C GQ V C +PC +
Sbjct: 573 RRVDHVGVCVNYCGTD-GDCAGDKKCCSNGCGRTCTSPVRQACPEGQPVVMCLRDPCE-S 630
Query: 219 ATCDA 233
A+C A
Sbjct: 631 ASCPA 635
>SB_20264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCADNSR-----CIRG----QC---VDACKAEPCGINATCDAVGHRSH 251
D+C +G C+ C D CI G C +D C + PC TC+ +
Sbjct: 217 DECASGPCQNGATCNDGVNNYTCSCIPGFNGTNCETNIDECASGPCQNGGTCNDGVNNYT 276
Query: 252 CLALP 266
CL +P
Sbjct: 277 CLCIP 281
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/98 (23%), Positives = 33/98 (33%), Gaps = 17/98 (17%)
Frame = +3
Query: 24 PCRPAEGRIIDSRGRCVCDSERGFIIQG-----DKCVAGGCRTDDNCADNSRCIRGQC-- 182
PC+ G +D R C GF + D+C C C D +C
Sbjct: 147 PCKNG-GTCVDGINRYSCTCVAGFTGKNCETDIDECAGNPCANGGTCKDGINGFTCECAV 205
Query: 183 ----------VDACKAEPCGINATCDAVGHRSHCLALP 266
+D C + PC ATC+ + C +P
Sbjct: 206 GYNGSTCEIDIDECASGPCQNGATCNDGVNNYTCSCIP 243
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Frame = +3
Query: 72 VCD-SERGFIIQGDKCVAGGCRTDDNCADNSRCIRG----QC---VDACKAEPCGINATC 227
+CD E + G C GG D N + C G C +D C PC ATC
Sbjct: 754 ICDVKEVSCAVAGTICANGGTCFDSNGVQSCTCKPGFTGSYCRTNIDECAKGPCKYGATC 813
Query: 228 -DAVGH 242
DAV +
Sbjct: 814 HDAVAN 819
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 33 PAEGRIIDSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPC 209
P R +++RG C GF++ GD CR + C+ + C++ + C
Sbjct: 42 PCSQRCVNTRGSLYCACSSGFLLLGDGFT---CRDVNECSQSGHGCEQHCMNTVGSYTC 97
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = -1
Query: 265 GNARQ*ERCPTASQVALIPQGSALQASTH*PRMHRELSAQLSSVRQPP-ATHLSP*IIKP 89
GN R E + + + A++ R ++++ ++ PP A L+ +KP
Sbjct: 1243 GNQRHVEGADREEEQGITEAETPNLANSRADRTPQDITPTANAAFFPPEALALTSTPLKP 1302
Query: 88 RSESQTHRPLESIIRPSAGRQGIHSP 11
R+E+++ RP + SAG +G SP
Sbjct: 1303 RTENKSVRPSSESHQGSAGSEGYASP 1328
>SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 183 VDACKAEPCGINATCDAVGHRSHCLALPA 269
+D CK+EPC N TC A+ + PA
Sbjct: 247 LDPCKSEPCQNNGTCAALSASDYNCKCPA 275
>SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3)
Length = 227
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +3
Query: 66 RCVCDSERGFIIQGDKCVAGGCRTDDNCADNSR-CIRGQCVDACKAEPCGINATC 227
+ V S R I GDKC+ T C +R I C C PC TC
Sbjct: 16 KAVTSSSRCSAINGDKCIQQCNGTKCECTGRNRDAIYTGCTQLCGRHPCN-TLTC 69
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 156 NSRCIRGQCVDACKAEPCGIN 218
+ RC+ GQC AC A+ C ++
Sbjct: 93 SQRCLSGQCTIACAAKRCSLD 113
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 17/98 (17%)
Frame = +3
Query: 24 PCRPAEGRIIDSRGRCVCDSERGFI-----IQGDKCVAGGCRTDDNCADNSR-----CIR 173
PC+ G +D R C E G+ I+ ++C +G C C D C
Sbjct: 170 PCQNG-GSCVDRRDGYTCTCEAGYNGINCEIEINECDSGPCNNGGTCTDRVNGYECVCNA 228
Query: 174 G----QC---VDACKAEPCGINATCDAVGHRSHCLALP 266
G +C +D C + PC TC + + +C P
Sbjct: 229 GYTGTRCEIDIDECASNPCINGGTCTDMVNGYNCTCPP 266
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +3
Query: 102 QGDKCVAGGCRTDDNCADNSRCIRG----QC---VDACKAEPCGINATCDAVGHRSHCLA 260
+ + CV GG D + + C+ G +C ++ C + PC TC + + HC
Sbjct: 1151 ENNPCVNGGTCADQVNSFSCTCVSGYTGLKCETDINECASNPCVNGGTCTDLVNGFHCTC 1210
Query: 261 LP 266
P
Sbjct: 1211 PP 1212
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 63 GRCVCDSERGFIIQGDKCV-AGGC-RTDDNCADNSRCIRGQCVDACKAEP 206
G VC +GF+ G CV C D +CA ++ CI +C+ P
Sbjct: 193 GTFVCRCRKGFVGDGKTCVDKDECVEEDHDCAKSADCINSVGSYSCQCRP 242
Score = 28.7 bits (61), Expect = 5.6
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Frame = +3
Query: 27 CRPAEGRIIDSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRG------QCV- 185
C+ AEG DS+G+C D + D V C D RC+RG C+
Sbjct: 484 CQCAEGYERDSQGKC-ADVNECKTGKHDCSVNALCTNTDG-TFICRCLRGYIGDGKTCID 541
Query: 186 -DACK--AEPCGINATC-DAVGHRSHCLALP 266
D CK C +NA C +++G S C+ P
Sbjct: 542 FDECKLPKNDCDVNAECINSIGSYS-CICKP 571
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +3
Query: 63 GRCVCDSERGFIIQGDKCVAGGC-RTDDNCADNSRCIRGQCVDACKAEPCGINATCD 230
G+C C+ G G C GC D NC N C + C+ P CD
Sbjct: 1533 GKCKCNEAAGDAYVGVNCELPGCPGRDGNCNGNGFC--NLKLQKCECYPGWAGDACD 1587
>SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 CRTDDNCADNSRCIRGQCVDA--CKAEPCGINATCDAVGHRSHC 254
C + C D C QCV A C+ C ++ C+ G+ S C
Sbjct: 53 CSVYEKCDDGRICCNNQCVFASTCQGYRCIFDSDCNNGGYLSCC 96
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Frame = +3
Query: 24 PCRPAEGRIIDSRG--RCVCDSE-RGFI--IQGDKCVAGGCRTDDNCAD-----NSRCIR 173
PC+ I ++ G RC C + GF I+ + C + C C D N C
Sbjct: 1773 PCKNGATCIREAHGKYRCQCALDFTGFNCEIRVNNCSSSPCLHGGTCIDGFEDYNCTCPG 1832
Query: 174 G----QC--VDACKAEPCGINATCD 230
G QC VD C A C NATC+
Sbjct: 1833 GYYGKQCETVDTCFAHACKNNATCN 1857
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/95 (26%), Positives = 30/95 (31%), Gaps = 17/95 (17%)
Frame = +3
Query: 24 PCRPAEGRIIDSRGRCVCDSERGFIIQG-----DKCVAGGCRTDDNCADNSRCIRGQC-- 182
PCR +D + C GF Q D C CR C D C
Sbjct: 2530 PCRNG-ATCVDGINKYSCTCPIGFTDQTCSTNIDDCATNPCRNGATCVDGINKYSCTCPI 2588
Query: 183 ----------VDACKAEPCGINATCDAVGHRSHCL 257
+D C PCG ATC ++ CL
Sbjct: 2589 GFTDQTCSTNIDDCATNPCGNGATCVDEINKYSCL 2623
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 15/78 (19%)
Frame = +3
Query: 69 CVCD---SERGFIIQGDKCVAGGCRTDDNCADN-----SRCIRG----QC---VDACKAE 203
C C +++ ++ D+C + C C D CI G C +D C +
Sbjct: 2698 CACAVGYTDQNCSVEIDECASNPCLNGATCTDRLGGYACSCIPGFTGKNCETDLDECLSN 2757
Query: 204 PCGINATCDAVGHRSHCL 257
PCG ATC + + C+
Sbjct: 2758 PCGNGATCRHLVNNYTCI 2775
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 19/64 (29%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCADNSR-----------CIRG----QCVD---ACKAEPCGINATC-D 230
D+C++ C C+D++ C++G +C++ C + PC NATC D
Sbjct: 1935 DECLSSPCANGGTCSDSTSSASHFVGFICACVQGYEGARCMNRTNVCASSPCQNNATCRD 1994
Query: 231 AVGH 242
+GH
Sbjct: 1995 VMGH 1998
>SB_16879| Best HMM Match : Stig1 (HMM E-Value=1)
Length = 232
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 CRTDDNCADNSRCIRGQCVDA--CKAEPCGINATCDAVGHRSHC 254
C + C D C QCV A C+ C ++ C+ G+ S C
Sbjct: 53 CSVYEKCDDGRICCNNQCVFASTCQGYRCIFDSDCNNGGYLSCC 96
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 15/109 (13%)
Frame = +3
Query: 39 EGRIIDSRGRCVCDSERGFIIQGD--------KCVAGGCRTDDNCAD-----NSRCIRGQ 179
E R +S G +C G+I+ D +C +G + + CA+ C +
Sbjct: 523 EQRCTNSLGSFICSCWTGYILGSDYKSCVDVDECSSGIAQCNQTCANIPGSFTCSCDQRN 582
Query: 180 C--VDACKAEPCGINATCDAVGHRSHCLALPATLEILEFSVMQQQQCTE 320
C +D C + N TC+ V +C P + +M+ Q C +
Sbjct: 583 CLDIDECSSNLHICNQTCNNVPGSYYCTCFPGF-----YLMMEDQSCVD 626
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 42 GRIIDSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPC 209
GR I+ G CD RG+ + D+ C + C N+ +C++ C
Sbjct: 404 GRCINRPGSYTCDCPRGYFVLHDEENGHRCVDINECKRNNGWCEHECINIIGTYRC 459
>SB_39510| Best HMM Match : VWA (HMM E-Value=0)
Length = 705
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 12/52 (23%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCAD-----NSRCIRG----QC---VDACKAEPCGINATC 227
DKC C+ C N C G C VD CK+ PC N C
Sbjct: 3 DKCATNPCKNSGTCTSVYSDFNCTCSSGFQGKDCSLDVDKCKSSPCNKNQNC 54
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 12/52 (23%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCAD-----NSRCIRG----QC---VDACKAEPCGINATC 227
DKC C+ C N C G C VD CK+ PC N C
Sbjct: 4730 DKCATNPCKNSGTCTSVYSDFNCTCSSGFQGKDCSLDVDECKSSPCNKNQNC 4781
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 69 CVCDSE---RGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINAT 224
C C S + + D+C + C + NC ++ C D KA+ C + T
Sbjct: 4752 CTCSSGFQGKDCSLDVDECKSSPCNKNQNCINSFGSFTCVCKDGLKADNCETDFT 4806
>SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43)
Length = 360
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 242 SLSLPCIAGYTGNPRIQCNATTTMYRTDFPT 334
S + C AGYTGN C T T Y +PT
Sbjct: 251 SFTCACNAGYTGNGH-TCQVTRTQYWALYPT 280
>SB_34550| Best HMM Match : VWA (HMM E-Value=0)
Length = 519
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 12/52 (23%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCAD-----NSRCIRG----QC---VDACKAEPCGINATC 227
DKC C+ C N C G C VD CK+ PC N C
Sbjct: 3 DKCATNPCKNSGTCTSVYSDFNCTCSSGFQGKDCSLDVDECKSSPCNKNQNC 54
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 69 CVCDSE---RGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINAT 224
C C S + + D+C + C + NC ++ C D KA+ C + T
Sbjct: 25 CTCSSGFQGKDCSLDVDECKSSPCNKNQNCINSFGSFTCVCKDGLKADNCETDFT 79
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 135 TDD--NCADNSRCIRGQCVDACKAEPCGINATCDA 233
TDD C N++C++ +C+ CKA G TC A
Sbjct: 644 TDDCNGCHHNAKCVKKECI--CKAGFSGDGTTCRA 676
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 69 CVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCV 185
C+C + GF G C C + C+ + +CIRG C+
Sbjct: 21 CICKA--GFSGDGTTCRVDNCV--NGCSKHGKCIRGFCI 55
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 135 TDD--NCADNSRCIRGQCVDACKAEPCGINATC 227
TDD C N++C++ +C+ CKA G TC
Sbjct: 4 TDDCNGCHHNAKCVKKECI--CKAGFSGDGTTC 34
>SB_1891| Best HMM Match : EGF (HMM E-Value=6.5e-15)
Length = 106
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 12/52 (23%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCAD-----NSRCIRG----QC---VDACKAEPCGINATC 227
DKC C+ C N C G C VD CK+ PC N C
Sbjct: 32 DKCATNPCKNSGTCTSVYSDFNCTCSSGFQGKDCSLDVDECKSSPCNKNQNC 83
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +3
Query: 66 RCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATCDAVGHR 245
RC CDS KC + C+ +C+ G+CV C P ++ C A +
Sbjct: 389 RCECDSPFDKAKDVGKCKMTNSSDEQPCSGQGQCVCGRCV--CNQVPKEVH-VCAANANA 445
Query: 246 SHCLALPATLEIL 284
S +L T+E L
Sbjct: 446 SPS-SLGRTVESL 457
>SB_12687| Best HMM Match : EGF_2 (HMM E-Value=0.22)
Length = 150
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +3
Query: 66 RCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATCDAVGHR 245
RC CDS KC + C+ +C+ G+CV C P ++ C A +
Sbjct: 5 RCECDSPFDKAKDVGKCKMTNSSDEQPCSGQGQCVCGRCV--CNQVPKEVH-VCAANANA 61
Query: 246 SHCLALPATLEIL 284
S +L T+E L
Sbjct: 62 SPS-SLGRTVESL 73
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 183 VDACKAEPCGINATCDAVGHRSHC 254
+D C + PC +NA C + + HC
Sbjct: 400 IDMCVSNPCKLNAACTPLVNDFHC 423
>SB_11540| Best HMM Match : EGF (HMM E-Value=1.5e-25)
Length = 103
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = +3
Query: 69 CVCD-SERGFIIQGD--KCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATC 227
C C G + Q D +C + C C D+ ++ C++ PC ATC
Sbjct: 25 CKCKLGYTGIVCQQDINECQSNPCLNGATCTDHVNGYTCSYINECQSNPCLNGATC 80
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 6 LYGECIPCR-PAEGRIIDSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQC 182
L G C C+ G I D RG+C C++ ++C +G ++C N +C + C
Sbjct: 385 LQGYCSRCQCNGHGSICDERGKCSCENN-----TAEQCHSG----QNDCYKN-QCTK--C 432
Query: 183 VDACKAEPCGINATCDAVGH 242
VD P + H
Sbjct: 433 VDGFLGSPADSRLCYSKINH 452
>SB_48837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +1
Query: 529 GLASFVLVMQTHLKLVTSTTKAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTC 708
GL ++++ T + +TSTT + I T N+T + M+ T T T
Sbjct: 10 GLTFLIVIITTVITNITSTTTIIMVFVIITTVITNITSTTTIIMVFVIITTVITNITSTT 69
Query: 709 SMRIIFTFWRPS 744
++ I+F P+
Sbjct: 70 TIIIVFIIIVPA 81
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 269 YTGNPRIQCNATTTMYRTDFPTPDIQVECLADGVRVRLKIKDFNGLLYVKS 421
Y+ N ++ + R D +P+I V +D +RVRL N L+ KS
Sbjct: 353 YSPNILVRAKSDNIRVRLDTYSPNILVRAKSDNIRVRLDTYSPNILVRAKS 403
>SB_36080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 108 DKCVAGG--CRTDDNCADNSRCIRGQCVDAC 194
D C+ G C TD++C +C CV +C
Sbjct: 80 DYCLRGKSTCNTDEDCPGPKKCCDQSCVTSC 110
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 28.3 bits (60), Expect = 7.5
Identities = 30/114 (26%), Positives = 41/114 (35%), Gaps = 7/114 (6%)
Frame = +3
Query: 15 ECIPCRPAEGR-IIDSRGRCVCDSERGFIIQGDKC------VAGGCRTDDNCADNSRCIR 173
EC GR ID G C+ G+ QG C AG C+ + C D
Sbjct: 476 ECAARPCINGRKCIDLIGDYACECLEGW--QGKNCDQNINDCAGQCKHNGTCIDQLNDYT 533
Query: 174 GQCVDACKAEPCGINATCDAVGHRSHCLALPATLEILEFSVMQQQQCTEPISQH 335
C + CG+ HCL+ P + + +V+ QC PI H
Sbjct: 534 CHCPLGYTGKNCGLLV--------DHCLSNPCLNKGICTAVVNGYQCVCPIGFH 579
>SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34)
Length = 262
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 6 LYGECIP--CRPAEGRIIDSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCI 170
L G C P + G+ I S +C D++ G + C C DN RCI
Sbjct: 184 LSGTCAPGQFKCGNGKCIPSSWKCDHDNDCGDNSDENNCPYSTCNPSQFKCDNGRCI 240
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 63 GRCV---CDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATCDA 233
GRC C +R G C + C T +C C G C+ +C + +C
Sbjct: 320 GRCQAISCGGDRCTQECGKNCTSMAC-TAKSC--ELSCPGGGCIMSCSSSVENCTMSCPG 376
Query: 234 VGHRSHCLA 260
G HC+A
Sbjct: 377 GGCSQHCVA 385
>SB_47465| Best HMM Match : EGF_CA (HMM E-Value=2.4e-08)
Length = 263
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 12 GECIPCRPAEGRIIDSR---GRCVCDSERGFIIQGDKCV-AGGCRTDDNCADNSRCI 170
GEC C R SR G +C+ ++GF+ + + CV C C+++++CI
Sbjct: 115 GEC-RCSENCPRYSQSRNVSGSIICECKKGFVREPEGCVDIDECVYPRVCSEHAKCI 170
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/42 (26%), Positives = 17/42 (40%)
Frame = +3
Query: 129 CRTDDNCADNSRCIRGQCVDACKAEPCGINATCDAVGHRSHC 254
C T + C +N RC C + C + C V ++C
Sbjct: 693 CYTIEECPENLRCCSDGCRNICLHPQARLLIKCPVVARPTNC 734
>SB_1752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 129 CRTDDNCADNSRCIRGQCVDACKAEPCGINATC 227
C D++CA + C++ C+ K C + TC
Sbjct: 49 CNRDEDCARDELCVQHMCMACSKRLSCDVK-TC 80
>SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 879
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 12/52 (23%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCADNS-----RCIRG-------QCVDACKAEPCGINATC 227
D+CVA C C +N C+ G Q V+ C +PC TC
Sbjct: 536 DECVANPCANQGTCYNNDGSYTCACVAGWTGLNCDQDVNECATDPCDNGGTC 587
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 12/52 (23%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCADNS-----RCIRG-------QCVDACKAEPCGINATC 227
D+CVA C C +N C+ G Q V+ C +PC TC
Sbjct: 650 DECVANPCANQGTCYNNDGSYTCACVAGRTGLNCDQDVNECATDPCDNGGTC 701
>SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1408
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 12/65 (18%)
Frame = +3
Query: 108 DKCVAGGCRTDDNCAD-----NSRCIRG----QC---VDACKAEPCGINATCDAVGHRSH 251
D+C G C C + N C+ G C ++ C + PC ATC+ + + +
Sbjct: 672 DECALGFCDNGATCNNFNGTYNCTCVPGYTDRNCSTDINECASNPCENGATCNDLINYFN 731
Query: 252 CLALP 266
C +P
Sbjct: 732 CTCVP 736
>SB_48092| Best HMM Match : PMG (HMM E-Value=7.6)
Length = 294
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 528 WLSKLRSSNANSSETGNINHKSIPHQMHIQNW*TKRNSCIQCVHVNNSRHNRQ 686
WL K ++N NSS + N N S N + NS + NN+ +N +
Sbjct: 60 WLDKNNNNNNNSSSSNNSNSNSSSSSSSSSNSNSNSNSNNNNNNNNNNNNNNK 112
>SB_38843| Best HMM Match : Dickkopf_N (HMM E-Value=0.28)
Length = 241
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 60 RGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQC 182
+ RC C E +GDK C D +CA N CI C
Sbjct: 69 KSRCRCVREPCITERGDK---QECDRDADCAANKTCINSFC 106
>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2937
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 12/64 (18%)
Frame = +3
Query: 72 VCDSERGFIIQGDKCVAGGCRTDDNCAD---NSRCIRG------QC---VDACKAEPCGI 215
+C ER D+C A C D C D N CI C VD C +EPC
Sbjct: 85 ICSYERTKSPGVDECAASPCLNDGTCIDGPGNYSCICSTGFLGPTCEINVDDCASEPCLN 144
Query: 216 NATC 227
C
Sbjct: 145 GGAC 148
>SB_22258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 84 ERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQC 182
E+ F+ + ++ C +D CA SRC+ C
Sbjct: 311 EKRFLRRWEETRISACISDQECAYGSRCVSNSC 343
>SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Frame = +3
Query: 105 GDKCVAGGCRTDDNCADNSRCIRGQ----C---VDACKAEPCGINATCD 230
GD C GG TD C G C +D C + PC ATC+
Sbjct: 210 GDPCANGGTCTDGINGFTCTCPAGYNGSTCDNDIDECASNPCQNGATCN 258
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,199,134
Number of Sequences: 59808
Number of extensions: 551463
Number of successful extensions: 1980
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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