Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00858
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 393 DGAFYRHHTLTTEYMNKIYYNGAPEAHNVSRLRETHFSS 509
           D   Y HH+    Y +  YYN   +  N  ++   H+S+
Sbjct: 4   DVGMYGHHSQHGTYPSDNYYNYTSDIPNAQQM-PPHYSN 41


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +2

Query: 11  IMPPEAPLSPEVPQRERLGSMKS-----VDRST-DGNDVHDGSDNSS 133
           I+PPE+P   +  Q E+  S +       D ST DG  V + ++ SS
Sbjct: 679 ILPPESPTRDKSKQNEKSPSPQQRSPSVTDLSTKDGTTVPESNNGSS 725


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 393 DGAFYRHHTLTTEYMNKIYYNGAPEAHNVSRLRETHFSS 509
           D   Y HH+    Y +  YYN   +  N  ++   H+S+
Sbjct: 4   DVGMYGHHSQHGTYPSDNYYNYTSDIPNAQQM-PPHYSN 41


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 393 DGAFYRHHTLTTEYMNKIYYNGAPEAHNVSRLRETHFSS 509
           D   Y HH+    Y +  YYN   +  N  ++   H+S+
Sbjct: 4   DVGMYGHHSQHGTYPSDNYYNYTSDIPNAQQM-PPHYSN 41


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/56 (23%), Positives = 19/56 (33%)
 Frame = +2

Query: 518 DITTHYTHGNVIPHQVQNGSKNTPLLYQYASQLKAQSQHLGGVHHHQMQGQSKRRP 685
           D+  H  H     HQ     +    +      L   S H   +HH+ M    K+ P
Sbjct: 310 DLNMHQQH-----HQQNMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMSHHLKQEP 360


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 5   TGIMPPEAPLSPEVP 49
           TG++PP   LSP  P
Sbjct: 227 TGLIPPHPGLSPHPP 241


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 5   TGIMPPEAPLSPEVP 49
           TG++PP   LSP  P
Sbjct: 119 TGLIPPHPGLSPHPP 133


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 185 IMLTDSLHLLYLVCRPKVTLDTL 253
           + +T ++HLL+L+C    T+  L
Sbjct: 62  VSITFNVHLLFLLCSGYFTVHLL 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,167
Number of Sequences: 336
Number of extensions: 4048
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)