Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00858
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   1.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   3.1  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    24   5.4  

>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +3

Query: 207 TFYIWYVDQKSP*TH*RPETSCSNFFPSPPQERTTDTFSMHPSHT 341
           T  +W     +  TH  P T+  +  P PP   TT T    P+ T
Sbjct: 218 TTTVWIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTTVWTDPTTT 262


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +1

Query: 472 IMCQGCGKHILVQSS*HNNSLYSWKCYTSPGSKWLQKHTVIISVCFSVKGS 624
           ++ Q C K   +  S  N +  SW+ + S  + W    +  I +C +  G+
Sbjct: 295 VLTQKCIKEFPLDGSWGNLTDESWELFNSNDTNWFYSESGDIPLCGNSSGA 345


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 309 TDTFSMHPSHTYPSLSNRQE 368
           T+ F  HP   +PS+S+ +E
Sbjct: 447 TELFPQHPPFNWPSISSEEE 466


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 285 PSPPQERTTDTFSMHPSHTYPSLSN 359
           P   + RT +   M+P HT P+L +
Sbjct: 36  PLAGETRTEEFMRMNPEHTIPTLDD 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,331
Number of Sequences: 2352
Number of extensions: 17563
Number of successful extensions: 71
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)