Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00858
         (719 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY196485-1|AAP33842.1|  246|Homo sapiens I-mfa domain-containing...    32   1.8  
AF054589-2|AAF36998.1|  246|Homo sapiens HIC protein isoform p32...    32   1.8  
AF054589-1|AAF36999.1|  355|Homo sapiens HIC protein isoform p40...    32   1.8  

>AY196485-1|AAP33842.1|  246|Homo sapiens I-mfa domain-containing
           protein protein.
          Length = 246

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +2

Query: 20  PEAPLSPEVPQRERLGSMKSVDRS-TDGNDVHDGSDNSSRRMRLTSAEDSKMLTVKIMLT 196
           P+   S +VP  E +G +K+     ++GN +H G+ + S   R  SA  S+ +  KI  +
Sbjct: 79  PQLQTSAQVPSGEEIGKIKNGHTGLSNGNGIHHGAKHGSADNRKLSAPVSQKMHRKIQSS 138

Query: 197 DSLH 208
            S++
Sbjct: 139 LSVN 142


>AF054589-2|AAF36998.1|  246|Homo sapiens HIC protein isoform p32
           protein.
          Length = 246

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +2

Query: 20  PEAPLSPEVPQRERLGSMKSVDRS-TDGNDVHDGSDNSSRRMRLTSAEDSKMLTVKIMLT 196
           P+   S +VP  E +G +K+     ++GN +H G+ + S   R  SA  S+ +  KI  +
Sbjct: 79  PQLQTSAQVPSGEEIGKIKNGHTGLSNGNGIHHGAKHGSADNRKLSAPVSQKMHRKIQSS 138

Query: 197 DSLH 208
            S++
Sbjct: 139 LSVN 142


>AF054589-1|AAF36999.1|  355|Homo sapiens HIC protein isoform p40
           protein.
          Length = 355

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +2

Query: 20  PEAPLSPEVPQRERLGSMKSVDRS-TDGNDVHDGSDNSSRRMRLTSAEDSKMLTVKIMLT 196
           P+   S +VP  E +G +K+     ++GN +H G+ + S   R  SA  S+ +  KI  +
Sbjct: 188 PQLQTSAQVPSGEEIGKIKNGHTGLSNGNGIHHGAKHGSADNRKLSAPVSQKMHRKIQSS 247

Query: 197 DSLH 208
            S++
Sbjct: 248 LSVN 251


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,824,615
Number of Sequences: 237096
Number of extensions: 2564834
Number of successful extensions: 10182
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10177
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)