Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00858
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.54 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.54 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   2.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.9  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   8.9  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   8.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 426 TEYMNKIYYNGAPEAHNVSR 485
           TEY  KIY +  PE +NV R
Sbjct: 249 TEYTLKIYTHDIPETYNVVR 268


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 426 TEYMNKIYYNGAPEAHNVSR 485
           TEY  KIY +  PE +NV R
Sbjct: 249 TEYTLKIYTHDIPETYNVVR 268


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +3

Query: 321 SMHPSHTYPSLSNRQEPINENVHNDGAFYRHHTLTTEYMN---KIYYNGAP 464
           ++H ++ Y    N +   N N +N   +Y+++ +  E +     +YY   P
Sbjct: 89  TIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNYIINIEQIPVPVPVYYGNFP 139


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 104 DVHDGSDNSSRRMRLTSAEDSKMLTVK 184
           D H    NS  RM LT A     LT+K
Sbjct: 276 DEHSNRTNSDPRMILTEAYTEFNLTIK 302


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = -3

Query: 669 CPCIWWWCTPP 637
           CP  W W  PP
Sbjct: 383 CPADWLWIVPP 393


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 89  STDGNDVHDGSDNSSR 136
           S DG+D +DG ++S R
Sbjct: 196 SDDGSDGNDGDESSCR 211


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 86  RSTDGNDVHDGSDNSSR 136
           RSTD  DV  GS++  R
Sbjct: 238 RSTDFQDVESGSESFKR 254


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 86  RSTDGNDVHDGSDNSSR 136
           RSTD  DV  GS++  R
Sbjct: 238 RSTDFQDVESGSESFKR 254


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,383
Number of Sequences: 438
Number of extensions: 5326
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)