Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00857
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.25
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.25
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 30 0.33
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.3
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 27 1.8
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 1.8
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 27 2.3
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 3.1
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.1
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 3.1
SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.1
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 26 4.0
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 4.0
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 26 4.0
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 4.0
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 7.1
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 25 7.1
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 7.1
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 7.1
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 9.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 9.3
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 9.3
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 9.3
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 9.3
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 9.3
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 25 9.3
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 25 9.3
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 30.3 bits (65), Expect = 0.25
Identities = 28/93 (30%), Positives = 43/93 (46%)
Frame = +1
Query: 16 PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTK 195
P S S + A + L + V R F + +EH+ K+LE+Q + L +
Sbjct: 171 PSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQ 229
Query: 196 SKDAQDFSKAWKDGSESVLHSSTPSPRVSRERS 294
SKDA A + S S L S+ S R+S++ S
Sbjct: 230 SKDASSNLTAC-NRSGSSLSSNFYSSRLSKKTS 261
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 30.3 bits (65), Expect = 0.25
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +3
Query: 261 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 440
N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 441 TVQESQKLAKKVSSNVQETNE 503
+QE ++ K + Q+ +E
Sbjct: 397 IIQEKSRVDKMIDEYRQKLSE 417
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.9 bits (64), Expect = 0.33
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 261 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAA 431
N + + L + +A KA+++LEQ+ + E L K H + E+ + +EKL A
Sbjct: 43 NEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAM 101
Query: 432 VQNTVQESQKL 464
++ + S++L
Sbjct: 102 LKRKQKLSEEL 112
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 1.3
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 249 AAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 416
A +L A AK A DA A E +++ +IER+A K A + E+ ATALRE
Sbjct: 140 ALELEARAKK---AAQDAE-LASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 170 NNSLTRSPSQRTHRTSARLGRTAPSP-CCTAQRLRQ 274
+N+L+ +PS H + +L T SP CC+A L Q
Sbjct: 74 SNALSNNPSLHVHILADQLRCTRESPGCCSASLLMQ 109
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 339 ASTVPKPPWPCRSRLRALPG 280
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 27.1 bits (57), Expect = 2.3
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +3
Query: 234 RLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALR 413
R R + + A K L GA KAKE ++ R +RTA E+RK +E+ R
Sbjct: 142 RSRRISGMILAHFKRLSGA---DEKKAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRR 198
Query: 414 EKLQAAVQNTVQESQ 458
+ A Q + Q
Sbjct: 199 AERAAEAQRVAGKEQ 213
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 109 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 228
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 276 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 431
S++ L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 103 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 192
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 118 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLHSSTPSPRVSRERSE 297
D K +HH +EF+ T ++++ S +K V+H+ P +++ + E
Sbjct: 59 DGIKYFDHHQREFNDTFSPKYSTRLSSA-----GLIYKHFGREVIHAVLPQLKINEQDLE 113
Query: 298 T 300
T
Sbjct: 114 T 114
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 4.0
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +3
Query: 309 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAV-----QNTVQESQKL 464
K KE +E Q ++ +ER E LRK D K+ + +AA+ + + E QKL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK-ELDKYKDLVETEAEKRAAITKEECEKSWLEQQKL 186
Query: 465 AKKVSSNVQETNEKL 509
K + T +KL
Sbjct: 187 YKDMEQENASTIQKL 201
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 4.0
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +3
Query: 309 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 485
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+++ + S+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-EKISRNLRSS 188
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 4.0
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 213 LQQGLEGRLRVRAAQLNAFAK----SLQGALGDANGKAKEALEQSRQNIERTAEELRKAH 380
LQQ ++G R + AQ+N ++ SLQ +L + + K+ LE QN++ + K
Sbjct: 102 LQQVVKGN-RNKPAQMNQHSENVVVSLQNSLANTSMTFKDILEIRTQNMKASQNRTEKFV 160
Query: 381 PDVEKNATAL 410
NA L
Sbjct: 161 ASSSMNANPL 170
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 324 LEQSRQNIERTAEELRKAHPDVEK 395
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 366 LRKAHPDVEKNATALREKLQAAVQNTVQE 452
L AH D+E T++RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 169 EQQFNSLTKSKDAQDFSKAWKDGSESVLHSSTPS 270
++Q NS+T+ + D +K+W + L+ S S
Sbjct: 84 QKQINSITQMRTKFDKTKSWLSSKRNTLNKSKES 117
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 7.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 127 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLHSSTPS---PRVSRERSE 297
KD+ + H T LT +K + D D ++ L+SS+ S +SR +SE
Sbjct: 246 KDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSE 305
Query: 298 TR 303
R
Sbjct: 306 LR 307
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 303 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 398
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 418 FSRRAVAFFSTSGWALRSSSAVRSMF 341
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.0 bits (52), Expect = 9.3
Identities = 22/101 (21%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 213 LQQGLEGRLRVRAAQLNAF--AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPD 386
++Q E + + + ++NA A+S + L D+ ++ ++ Q+IE T L K D
Sbjct: 459 VKQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSR--MKTQEQSIELT--RLYKQLQD 514
Query: 387 VEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 509
+E++ +++ + V + Q+ ++++ +Q+T E L
Sbjct: 515 IEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKEVL 555
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 294 GDANGKAKEALEQSRQNIERTAEE 365
G NG+AKE E+ R ++T E+
Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +3
Query: 6 RISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSR 119
+I ++L T+HHG +V+ ++ ++ G S ++R ++
Sbjct: 122 KIRNSLYSRTIHHGNRVQKKIK-NKHGKNSSKSSRAAQ 158
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 297 DANGKAKEALEQSRQNIERTAEE 365
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 345 CSASTVPKPPWPCRSRLRALPGDS 274
C +T+PKPP+ + L LP S
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKS 313
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 330 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 482
++RQ E A+ +RK+ PDV + ++ +V + +E + +SS
Sbjct: 284 ENRQFSEYVADRIRKSFPDVSFKNLHVLSCMEDSVMSPFRELGSVTSSMSS 334
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 130 DIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLHSSTPS 270
D ++ EF TL+ + L KS+ DF +K + S +S+PS
Sbjct: 325 DHDNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNSSSITSSPS 371
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,022,021
Number of Sequences: 5004
Number of extensions: 34244
Number of successful extensions: 176
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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