Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00857
(646 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 34 0.11
04_01_0180 + 2034021-2034023,2034741-2035088 33 0.26
02_04_0315 - 21969416-21970756 33 0.26
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 32 0.45
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 31 0.59
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 31 0.59
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 31 1.0
03_06_0141 - 31955782-31956801 31 1.0
10_08_0339 + 16922509-16923876,16923941-16924384,16924469-169246... 30 1.4
01_01_0401 + 3043634-3043894,3045610-3045849 30 1.4
02_04_0436 - 22920106-22920348,22920569-22920884,22929569-229300... 30 1.8
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 29 2.4
04_03_0735 + 19141038-19143227 29 2.4
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 29 2.4
03_02_0574 + 9575496-9575517,9575636-9576418,9576754-9577163,957... 29 2.4
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 29 4.2
09_02_0039 + 3293904-3294584 29 4.2
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 29 4.2
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 29 4.2
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 29 4.2
01_05_0249 - 19903154-19903454,19904114-19904168,19904707-199047... 29 4.2
07_01_0720 + 5512638-5513141,5513588-5514607 28 5.5
04_01_0290 + 3843610-3843712,3844088-3846003 28 5.5
01_06_1268 - 35878520-35879353,35879920-35880332,35881109-358815... 28 5.5
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 28 7.3
03_05_0373 + 23581812-23583293 28 7.3
08_02_1308 - 26024491-26025405 27 9.7
05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824 27 9.7
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 27 9.7
03_06_0040 + 31240164-31241102,31241280-31241897 27 9.7
03_04_0034 + 16679624-16679940,16679980-16680199,16680319-166806... 27 9.7
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 288 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 467
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLE 574
Query: 468 KKVSSNVQETNE 503
+N Q +
Sbjct: 575 NLFVTNSQRVKK 586
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 32.7 bits (71), Expect = 0.26
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = +3
Query: 132 HRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGLEGRLRVRAAQLNAFAKSLQGALGDANGK 311
HR +G D T V +GL GR+ ++LN K L +
Sbjct: 2 HRATRRGYTGDPPTKVLERENADAHKDQVKGLNGRI----SKLNDTIKELNDTI------ 51
Query: 312 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 440
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 --EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>02_04_0315 - 21969416-21970756
Length = 446
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 249 AAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 428
A Q N L + D NG + ALE++ + + E L A + K A+ EK ++
Sbjct: 230 AGQENVELAELHRVVDDENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ES 288
Query: 429 AVQNTVQESQKL 464
A++ QE++ L
Sbjct: 289 AMEALRQENESL 300
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 297 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 476
DA G+ EA+E + E+L A+PDV+ L E L+ A + ++++ L +
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSLENLL 696
Query: 477 SSN 485
+N
Sbjct: 697 ETN 699
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 31.5 bits (68), Expect = 0.59
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 LQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES 455
++G L D N G+A AL ++E EEL K D++ L K + V +
Sbjct: 191 MEGHLSDPNAGEASGALVSKDDDLEAVREELIKGFLDIDNGGRKLGIKEMGQLNEKVFQI 250
Query: 456 QKLAKKVSSNVQETNEKL 509
LAK V E + +L
Sbjct: 251 ACLAKLPPEEVGEASYEL 268
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 315 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 491
K+ +QS ERT E + KAH ++ K E +QAA +QE Q VQ
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQFPMSLADQKVQ 475
Query: 492 ET 497
T
Sbjct: 476 AT 477
>09_04_0151 - 15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/92 (22%), Positives = 44/92 (47%)
Frame = +3
Query: 231 GRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 410
G+L + A + A SLQ AL + +EAL + + + E+L E ++L
Sbjct: 915 GKLEMHAFDMEAEIASLQEALVTTIAEKEEALSRV-ELLTSAVEDLESRLNSAESETSSL 973
Query: 411 REKLQAAVQNTVQESQKLAKKVSSNVQETNEK 506
E+ A + + S+ ++KK+ +++ + +
Sbjct: 974 LEE-TAVLTRKLDASESISKKLEASISSLSRE 1004
>03_06_0141 - 31955782-31956801
Length = 339
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 351 ARCSASTVPKPPWPCRSRLRALPGDSWRRR*AVQ 250
ARC A+TV C++ R + GD +RRR A+Q
Sbjct: 57 ARCDAATVLSLAATCKALRRIILGDDFRRRLALQ 90
>10_08_0339 +
16922509-16923876,16923941-16924384,16924469-16924655,
16924750-16925702
Length = 983
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 243 VRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 389
+R + NAF K L+ +GD +G+ L Q ++ E A R++ V
Sbjct: 446 IRCSMKNAFTKILESGMGDGDGEPGVVLTQLARDTEELAVVERRSFSPV 494
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 284 LETLGEGVELCSTDSEPSFQALLKSC 207
L LG E CS+D E SF+A K C
Sbjct: 72 LSCLGRNDEFCSSDVEGSFEAFTKQC 97
>02_04_0436 -
22920106-22920348,22920569-22920884,22929569-22930027,
22930187-22930401,22930741-22930803,22930814-22930830,
22931141-22931389,22931546-22931774,22932427-22932534,
22932954-22933094,22933669-22933729,22933974-22934095,
22934533-22934760,22934857-22935000
Length = 864
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -2
Query: 354 CARCSASTVPKPPWP-CRSRLRAL---PGDSWRRR*AVQHGLGAVLPSLAEVL 208
C R S VP+ R+ +RAL PGD+ RR V HG G + PS A L
Sbjct: 598 CFRVSGHGVPRELQAGMRAAVRALFDLPGDAKRRNADVIHGSGYMAPSAANPL 650
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/81 (24%), Positives = 37/81 (45%)
Frame = +3
Query: 264 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 443
A A + G +G ++ LE+ R+ IER AEE + + E+ A A R + +
Sbjct: 180 AAAAAAAGTKKVGSGPSRVTLERLREGIERRAEE-EERRAEEERRAEAERAAAEERARRE 238
Query: 444 VQESQKLAKKVSSNVQETNEK 506
+E + A++ +E +
Sbjct: 239 EEEGRARAEEERRRREEERRR 259
>04_03_0735 + 19141038-19143227
Length = 729
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +3
Query: 189 HQVKGRTGLQQGLEGRLRVRAA-QLNAFAKSLQGALGDANG-KAKEALEQSRQNIERTAE 362
H G T + G + R V A+ + AF + +G K + A+ R N+ R
Sbjct: 337 HSNDGYTTMDFGGDNRETVAASTETTAFTDVAVAQVNGTSGEKLRSAVSGRRANVLREIS 396
Query: 363 ELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 482
++ +EK A++EKLQ + + S +LA++ S
Sbjct: 397 QIDTRALLIEKAKAAIQEKLQ---EWNITSSSRLAERGKS 433
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 285 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 425
G GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 44 GEKGDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>03_02_0574 +
9575496-9575517,9575636-9576418,9576754-9577163,
9577246-9578079
Length = 682
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 243 VRAAQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 404
VRA LN L+ + + LEQ+R+ N+ A+ELRK H + NAT
Sbjct: 454 VRANDLNQPRDELRKTVTEIKKDVHTQLEQARKTNKNVSGIAKELRKLHREGINNAT 510
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 414 EKLQAAVQNTVQESQKLAKKVSSNVQETN 500
EKLQ + + QE+Q+L KK+SS ++ ++
Sbjct: 153 EKLQKEISSLSQENQELKKKISSVLENSD 181
>09_02_0039 + 3293904-3294584
Length = 226
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +3
Query: 186 AHQVKGRTGLQQGLEGRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 365
A V G + R R R+A A A++ ALGD N EA ++ AEE
Sbjct: 9 ATAVLGNSSSSGARRRRQRRRSATATAVAEAETAALGDGNSARGEAEAPKDGDVMAAAEE 68
Query: 366 LRKA 377
+ A
Sbjct: 69 VEAA 72
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 294 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATALREKLQAA-VQNTVQESQKL 464
GD++G AKE L + SR ++ E RK +E K LR + Q +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 318 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ-AAVQ--NTVQESQKLAKKVSSNV 488
+AL + +ER AEE R AH + A +L+ AV+ N + Q+ A + SS
Sbjct: 400 QALREELATVERRAEEERIAHNATKMAAVEREVELEHRAVEASNALARIQRAADQSSSRA 459
Query: 489 QETNEKL 509
E K+
Sbjct: 460 MELEHKV 466
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 AKSLQGALGDANGK---AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 440
A+ G +A GK A+EA E++ + + A ELRK + + ATA RE L+A +
Sbjct: 151 AEQEAGRREEAEGKLRAAEEAAERAGKEAQEHAAELRKHRAALAELATARRE-LEAELAR 209
Query: 441 TVQESQKLAKKVSSNVQETNE 503
+ ++ ++ +E
Sbjct: 210 AARRGDAAEAELGEALERRDE 230
>01_05_0249 -
19903154-19903454,19904114-19904168,19904707-19904791,
19905140-19905511
Length = 270
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 267 FAKSLQGALG--DANGKAKEALEQSRQNIERTAEELRKAHPDV 389
F KSL G + D +GKAK+ + + + + +EE++ + DV
Sbjct: 184 FEKSLVGQINIEDMSGKAKDVINEEGSSEDGNSEEMKDSDDDV 226
>07_01_0720 + 5512638-5513141,5513588-5514607
Length = 507
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 203 THRTSARLGRTAPSPCCTAQRLR 271
T R +ARLG T P+P ++ RLR
Sbjct: 59 TPRNAARLGATPPAPLSSSSRLR 81
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 28.3 bits (60), Expect = 5.5
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Frame = +3
Query: 228 EGRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELR------KAHPDV 389
E +L + A++ L GAL +AN A +A + + I + E+L+ K + D+
Sbjct: 187 EQKLNICEAEIERLKMEL-GALTEANEAAAKAFDTQNEEITKELEDLKTKLEEIKTNKDL 245
Query: 390 -EKNATALREKLQAAVQNTVQESQ--KLAKKVSSNVQETNE 503
E LR +L +A + Q K K+V V E E
Sbjct: 246 AESENGKLRSELLSAEEKYSQSEAEVKYLKQVMGAVVEAKE 286
>01_06_1268 -
35878520-35879353,35879920-35880332,35881109-35881510,
35881598-35881619
Length = 556
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 243 VRAAQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 404
+R+ +LN L+ + + LEQ+R+ N+ A+ELRK H + NAT
Sbjct: 328 LRSRELNQPRDELRKTVTEIKKDVHTQLEQTRKTNKNVHGIAKELRKLHREGINNAT 384
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 318 EALEQSRQNIERTAEELRKAHPDV-EKNATALRE--KLQAAVQNTVQESQKLAKKVSSNV 488
+ + + QN+E EL K H D+ E+ + L E KLQ ++ +E L S +
Sbjct: 558 DRISDTLQNLEAHYAELEKRHSDLQEEKGSVLDEVIKLQEQIRFERKEHNDLEHSRKSQL 617
Query: 489 QETNEKL 509
+EK+
Sbjct: 618 DALHEKI 624
>03_05_0373 + 23581812-23583293
Length = 493
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 351 ARCSASTVPKPPW 313
+RCSAST PK PW
Sbjct: 66 SRCSASTPPKSPW 78
>08_02_1308 - 26024491-26025405
Length = 304
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = -3
Query: 347 DVLPRLFQSLLGLAVRVSERSLETLGEGVELCSTDSEPSFQALLKSCASFDLVSELNCCS 168
D+ P F++LL + + + G+ +++ + ++ FQ LL + +DL C+
Sbjct: 173 DIEPLTFRALLRF-IYTDKLPADDGGDQLKMAAMATDELFQKLLAAADRYDLSRLKLMCA 231
Query: 167 KVLWNSL 147
+ LW ++
Sbjct: 232 QKLWEAV 238
>05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824
Length = 200
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 294 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 473
G G +K+ +++ +R +E A + A +EK QAA + + +Q K
Sbjct: 24 GQVMGASKDKASEAK---DRASEAAGHAAGKGQDTKEATKEKAQAAKERASETAQAAKDK 80
Query: 474 VSSNVQETNEK 506
SS Q +K
Sbjct: 81 TSSTSQAARDK 91
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 347 DVLPRLFQSLLGLAVRVSERSLETLGEGVELCSTDSEP 234
++ P++ + LL + + RS+ET + +E C +D +P
Sbjct: 3332 EIRPKMVRDLLKASSSILLRSIETYMDVLEYCFSDMDP 3369
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 79 ALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA--WKD 234
A+AQ RR+APD D+ +E L+ + N L + + D+ A W D
Sbjct: 190 AIAQSKTTRREAPDADTDMSMEAQELRHVLD-ELNPLIGAANLWDYLPALRWFD 242
>03_04_0034 +
16679624-16679940,16679980-16680199,16680319-16680624,
16680703-16681044,16681066-16681257,16681533-16681684,
16681803-16681974,16682017-16682338,16682414-16682862
Length = 823
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +3
Query: 285 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 443
GA G A A SR ++ R +L H D ++K + +NT
Sbjct: 140 GAAVGGGGAAVSARPASRASVRRNVSDLAAEHSDANDGIPVRKDKANWSARNT 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,375,467
Number of Sequences: 37544
Number of extensions: 272551
Number of successful extensions: 1513
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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