Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00857
(646 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 43 2e-04
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 39 0.003
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 34 0.070
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 34 0.093
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 34 0.093
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 34 0.093
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 34 0.093
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 32 0.28
At1g68790.1 68414.m07863 expressed protein 32 0.37
At2g35070.1 68415.m04302 expressed protein 31 0.50
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 31 0.50
At2g20510.1 68415.m02395 mitochondrial import inner membrane tra... 31 0.65
At4g27595.1 68417.m03964 protein transport protein-related low s... 30 1.1
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 30 1.1
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 30 1.5
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 30 1.5
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 30 1.5
At3g50370.1 68416.m05508 expressed protein 29 2.0
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 29 2.6
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 29 2.6
At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati... 29 2.6
At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966, gb|R6... 29 2.6
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 29 3.5
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 29 3.5
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 29 3.5
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 29 3.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 3.5
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 29 3.5
At3g58840.1 68416.m06558 expressed protein 28 4.6
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 4.6
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 28 4.6
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 28 4.6
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 4.6
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 28 4.6
At5g61920.1 68418.m07773 hypothetical protein 28 6.1
At5g40450.1 68418.m04905 expressed protein 28 6.1
At5g39450.1 68418.m04778 F-box family protein contains Pfam:PF00... 28 6.1
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 6.1
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 28 6.1
At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containi... 28 6.1
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 28 6.1
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 28 6.1
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 28 6.1
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 28 6.1
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 28 6.1
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 27 8.1
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 27 8.1
At3g46990.1 68416.m05103 hypothetical protein contains Pfam prof... 27 8.1
At3g12360.1 68416.m01541 ankyrin repeat family protein contains ... 27 8.1
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +3
Query: 183 LAHQ--VKGRTGLQQGLEGRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERT 356
L HQ V R GL QG R + + F+K ++G D+N + ++ +++ ++
Sbjct: 21 LVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGE-ADSNPEFQKTVKEFKER---- 75
Query: 357 AEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 494
AEEL+ D++ EKL Q E++ +AKKVSS+V++
Sbjct: 76 AEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVKD 121
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = +3
Query: 279 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 458
L G +A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q+++
Sbjct: 278 LSGKTEEAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTR 337
Query: 459 KLAKKVSSNVQETNE 503
+ + + +ET +
Sbjct: 338 ESTESGAQKAEETKD 352
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 34.3 bits (75), Expect = 0.070
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 458
Q G A G ++ E+ R +TA+ + KAH + + QAA Q + +Q
Sbjct: 18 QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77
Query: 459 KLAKKVSSNVQETNEK 506
+K S Q +K
Sbjct: 78 SAKEKTSQTAQTAQQK 93
Score = 31.5 bits (68), Expect = 0.50
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +3
Query: 294 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 470
G+ GKA+E Q+ + AEE R K + E Q+A T Q +Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 471 KVSSNVQETNEK 506
K Q EK
Sbjct: 71 KAHETAQSAKEK 82
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 33.9 bits (74), Expect = 0.093
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 446
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 447 QESQKLAKKVSSN-VQETNEK 506
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 33.9 bits (74), Expect = 0.093
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 446
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763
Query: 447 QESQKLAKKVSSN-VQETNEK 506
E +LAK+ +N V T +K
Sbjct: 764 GEKVQLAKEEGANDVLSTPDK 784
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.093
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 446
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 447 QESQKLAKKVSSN-VQETNEK 506
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.093
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 446
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 447 QESQKLAKKVSSN-VQETNEK 506
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 32.3 bits (70), Expect = 0.28
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 318 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSSNV 488
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES Q+L +K+S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056
Query: 489 QE 494
E
Sbjct: 1057 SE 1058
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 31.9 bits (69), Expect = 0.37
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 225 LEGRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNAT 404
L+ R R +L +SL L GK E +EQ + I E+L K +EK
Sbjct: 360 LDSRRREFEMELEQMRRSLDEEL---EGKKAE-IEQLQVEISHKEEKLAKREAALEKKEE 415
Query: 405 ALREK---LQAAVQNTVQESQKLAKKVSSNVQETNEKL 509
+++K L A ++ TV+E +K K + NE+L
Sbjct: 416 GVKKKEKDLDARLK-TVKEKEKALKAEEKKLHMENERL 452
>At2g35070.1 68415.m04302 expressed protein
Length = 158
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 204 RTGLQQGLEGRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQ-NIERTAEELRKAH 380
+ G+ + LE + V + Q A ++ GK K + +S + R AEE RK
Sbjct: 30 KLGMVKALEA-INVPSTQAEALTGAITSGFESVMGKVKADIAKSEEYKSTRVAEEFRKMR 88
Query: 381 PDVEK 395
D+EK
Sbjct: 89 ADIEK 93
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 31.5 bits (68), Expect = 0.50
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 231 GRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 410
G L+V+A + AK+ Q ++ N K + E+ + I R AEE + +++ A
Sbjct: 529 GILQVKAE--DKVAKTSQ-SITITNDKGRLTEEEIEEMI-REAEEFAEEDKIMKEKIDA- 583
Query: 411 REKLQAAVQN---TVQESQKLAKKVSSNVQETNE 503
R KL+ V N TV + +KLAKK+S +E E
Sbjct: 584 RNKLETYVYNMKSTVADKEKLAKKISDEDKEKME 617
>At2g20510.1 68415.m02395 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 472
Score = 31.1 bits (67), Expect = 0.65
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = +3
Query: 255 QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAV 434
+ + F + + G+A+ + E++ + ++ EE + D++ EKL
Sbjct: 44 RFSVFTEFSKNIRGEAHSNPE--FERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQA 101
Query: 435 QNTVQESQKLAKKVSSNVQE 494
E++ AKKVSS+V++
Sbjct: 102 DGVWTEAESAAKKVSSSVKD 121
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 467
D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 468 KKVSSNVQETNE 503
S VQE E
Sbjct: 703 ----STVQEAEE 710
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 243 VRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 422
V + QL A L G++ ++ +KE E SR + R ++EK +RE++
Sbjct: 19 VHSRQLGA---QLSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERV 71
Query: 423 QAAVQNTVQESQKLA 467
QA + +E+++LA
Sbjct: 72 QAQLGRVEEETKRLA 86
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 339 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 470
+++E+ +E RKAH + A AL +LQAA + Q+LA+
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 333 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 485
S N+ RT ++ HP+ + + +RE + + ++E+ +L + V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 309 KAKEALEQSRQNIERTAEEL-RKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 485
KA +A E+ R+ E + +KAH E+ +REK Q + +S+ ++V +
Sbjct: 233 KAHDAKEKVREKAHDVKETVAQKAHESKERAKDRVREKAQELKETATHKSKNAWERVKNG 292
Query: 486 VQE 494
+E
Sbjct: 293 ARE 295
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 327 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKK 473
EQ R R AEELRK+ + EK+ + E + QAA Q ++ +K++++
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 309 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 488
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 489 QETNEKL 509
+ E L
Sbjct: 246 EFNQEPL 252
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 309 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 488
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 489 QETNEKL 509
+ E L
Sbjct: 246 EFNQEPL 252
>At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeodomain leucine zipper protein GI:5006851 from
[Oryza sativa]
Length = 206
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 550 HPGGDQEDPGGRQRQAVSVDIELSHLINISFI 645
H D + GGR+R+ + + E SHL+ SFI
Sbjct: 55 HVNEDDSNSGGRRRKKLRLTKEQSHLLEESFI 86
>At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966,
gb|R65511, gb|T42324 and gb|T20569 come from this gene
Length = 571
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 225 LEGRLRVRAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 401
+ G L +R A K+ + D A +AL + N+E+ +E + + E+N+
Sbjct: 397 MRGSLEIRLAAALELKKTAEKEKKDKEDSALKALAEQEANMEKVVQESKLLQQEAEENS 455
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +3
Query: 300 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 479
A KA + E+++ E T E++ + A ++EK + + T + + A + +
Sbjct: 173 AKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAA 232
Query: 480 SNVQETNEK 506
+ET +K
Sbjct: 233 DKAEETKDK 241
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +3
Query: 300 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 479
A KA + E+++ E T E++ + A ++EK + + T + + A + +
Sbjct: 137 AKDKAYDVKEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAA 196
Query: 480 SNVQETNEK 506
+ET +K
Sbjct: 197 DKAEETKDK 205
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +3
Query: 258 LNAFAKSLQGALGDANGKAKEALEQS------RQN-IERTAEELRKAHPDVEKNATALRE 416
LN L+G L ++KE LEQ+ R N ++ EELR+ ++E + +
Sbjct: 428 LNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDMEELRQKSYEMEMKLKSRED 487
Query: 417 ---KLQAAVQNTVQESQKLAKKVSSNVQETNE 503
+ VQ+T+ E L+K++ + Q+ +
Sbjct: 488 GSSHAEPTVQSTISEKHVLSKELDARKQQLED 519
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +3
Query: 246 RAAQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 425
+AA+ AKSL + KAKE EQ++ L A ++E A E+L
Sbjct: 555 QAAEEADEAKSLAEVAREELRKAKEEAEQAKAGASTMESRLFAAQKEIE--AAKASERLA 612
Query: 426 AAVQNTVQESQKLAK 470
A ++ES+ K
Sbjct: 613 LAAIKALEESESTLK 627
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/66 (22%), Positives = 36/66 (54%)
Frame = +3
Query: 312 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 491
AKE +E+ R +E + + + + N TAL++ +++A +N E++K + + + +
Sbjct: 970 AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQ-MESAHENFRLEAEKRQRSLEAELV 1028
Query: 492 ETNEKL 509
E++
Sbjct: 1029 SLRERV 1034
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 225 LEGRLRVRAA-QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 401
+E L+++ + +K L+ L + + L+ ++ER + + +VEKN
Sbjct: 402 VENMLKIKEEFDYKSLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNF 461
Query: 402 TALREKLQAAVQNTVQES-QKLAKKVSSN 485
EK + Q ES +KL +K+ SN
Sbjct: 462 AEALEKEKLKCQMEYMESVKKLEEKLISN 490
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 309 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 482
KA + + + E+ AE LRK +VEK L K+ V+E ++ +KK+ S
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVL---EVREMEEKSKKLRS 182
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.3 bits (60), Expect = 4.6
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +3
Query: 213 LQQGLEGRLRVRAA-QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 389
LQ E L QL + L+G +G + + + AL++ + IER ++
Sbjct: 328 LQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRLEEAIERFNQK-------- 379
Query: 390 EKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 503
E ++ L EKL+ +N ++E +KLA + +S V +T +
Sbjct: 380 ETESSDLVEKLKTH-ENQIEEYKKLAHE-ASGVADTRK 415
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 321 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETN 500
ALE ++ E + D+ K T+ EKLQ+ + + +E+ +V++ Q T
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEEN----NQVNAMFQSTK 531
Query: 501 EKL 509
E+L
Sbjct: 532 EEL 534
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 AAQLNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATA 407
A L A L+ + + K K+ L++ + I++ E + + D+E+ N++A
Sbjct: 722 ADTLEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSA 781
Query: 408 LREKLQAAVQNTVQESQKLAKKVS 479
+ E+L A QN+ E+ K ++K S
Sbjct: 782 VSEQLPIARQNSAFENDKFSEKRS 805
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 28.3 bits (60), Expect = 4.6
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +3
Query: 207 TGLQQGLEGRLRVRAAQLNAFAK---SLQGALGDANGKAKEALEQSRQNIERTAEELRKA 377
TG+ + L GRL++ LN A+ L+ L D + EA + Q +E T E
Sbjct: 248 TGISKELVGRLQILQFSLNGSAQRESELKSKLEDCTVQL-EAKDLLVQKLEGTISE---- 302
Query: 378 HPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 494
+ ++ LRE +++A Q +L K V+++ QE
Sbjct: 303 NSEIVSEVLTLREYVKSAEQKLKNTDLEL-KSVNASKQE 340
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 118 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 234
D IE TK+ +KT EQ+FN + KSK + +D
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 270 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 449
AKSL A + KAKE ++++ + +L ++ ++E A+ EKL A +Q
Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569
Query: 450 ESQ 458
E++
Sbjct: 570 ETE 572
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 318 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ--AAVQNTVQESQKLAKKVSSNVQ 491
E+LE S Q +ER EE ++ + E+ + EKL ++ + + K +K+ S +
Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIS 229
Query: 492 ETNEK 506
K
Sbjct: 230 TARNK 234
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +3
Query: 297 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 476
D+NG E ++Q NI EE+ A P + ++ + + +++ + S++ +K V
Sbjct: 824 DSNGAEAEQIDQ---NITNETEEILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTV 880
Query: 477 SSNVQETNEK 506
++E E+
Sbjct: 881 DEKIEEKPEE 890
>At5g39450.1 68418.m04778 F-box family protein contains Pfam:PF00646
F-box domain ; similar to SKP1 interacting partner 2
(SKIP2) TIGR_Ath1:At5g67250
Length = 579
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 208 QDFSKAWKDGSESVLHSSTPSPRVSRERSETRTARPRRLWN 330
+ FS+ ++ G + +L S+ S +S RSETR ++ N
Sbjct: 321 KSFSRYFRSGIKHILGRSSSSKNMSSSRSETRPLNLQKFLN 361
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 375 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 271
P PRPC+R + P + RALPG W
Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95
>At4g21020.1 68417.m03041 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P23283 Desiccation-related
protein {Craterostigma plantagineum}; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 266
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +3
Query: 300 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 479
A A A E+++ ERT +++ + A +EK + ++T+ +++ A+
Sbjct: 114 AKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAK 173
Query: 480 SNVQETNE 503
V+E E
Sbjct: 174 EKVKEYGE 181
>At3g49170.1 68416.m05374 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 850
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 314 GLAVRVSERSLETLGEGVELCSTDSEPSFQALLKSCASFDLVSE 183
G A+RV E + + EGV+ +E ++ A+L +C+ LVSE
Sbjct: 554 GFAIRVLETFNQMIEEGVK----PNEVTYVAILSACSHVGLVSE 593
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 306 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 467
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 306 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 467
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 282 QGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 419
Q AL + + +AL + ER AEE R AH + K A RE+
Sbjct: 369 QAALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 348 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 509
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 348 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 509
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 297 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 476
D + K KE E+ R+ +ER E R+ +E+ REK++ + ++ KL K+
Sbjct: 137 DRHEKQKER-EREREKLEREKEREREK---IEREKEREREKMEREIFEREKDRLKLEKER 192
Query: 477 SSNVQETNEKL 509
+ EK+
Sbjct: 193 EIEREREREKI 203
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 348 RCSASTVPKPPWPCRSRLRALPGDSW 271
RC+ + P PP PC+S ++ P W
Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254
>At3g46990.1 68416.m05103 hypothetical protein contains Pfam profile
PF05340: Protein of unknown function (DUF740)
Length = 547
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 148 KEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLHSSTPSPRVSRERSETRTARPRRLW 327
KE L ++ + T +K + S + G + HSS PR+S + +PR W
Sbjct: 170 KEIASVLSRRLKNFTLNKRNDEKSDSRFAGIVNGRHSSDVDPRLSFDGGRISFEKPRSSW 229
Query: 328 N 330
+
Sbjct: 230 D 230
>At3g12360.1 68416.m01541 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 590
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 243 VRAAQLNAFAKSLQGALGDANGKAKEALEQSRQ---NIERTAEELRKAHPDVEKNAT 404
+RA +LN L+ + LEQ+++ N+ ++ELRK H + NAT
Sbjct: 363 LRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINNAT 419
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,998,036
Number of Sequences: 28952
Number of extensions: 197318
Number of successful extensions: 1077
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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