Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00855
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 122 SVNYLASYDGYPPHHSPPRLK 184
           S++YL+  +  PP   PPR++
Sbjct: 720 SISYLSMENNAPPPPPPPRVE 740


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 663 SGLYSGINPPTVDTSRNR 716
           +G +SG+ P  VDT+ N+
Sbjct: 217 TGHHSGLYPSAVDTTTNQ 234


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 543 RPTASQHRSLNRPSQP 496
           RP A+ H+  N P +P
Sbjct: 317 RPRATDHQRRNEPKRP 332


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 73  LYVCALS*KCRKRDSGICQLSC 138
           LY+ A+    RK DSGI    C
Sbjct: 13  LYLTAIYVSSRKSDSGIWYWQC 34


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 482 PGPTARNFTASSRRNSSSQPTTGSST 405
           P P     T S    +S QPT  S+T
Sbjct: 399 PEPQPTQTTESEPTQASEQPTESSTT 424


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 699  DTSRNRTRTASGHKQNDVGK 758
            D SRN     S H +ND G+
Sbjct: 1365 DVSRNNAGEYSCHVENDYGQ 1384


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 685 LIPEYNPLHW*PRRDVNTQPSD 620
           L P  +P H  PR  V T P D
Sbjct: 735 LPPPPHPHHQPPRNPVGTNPHD 756


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 685 LIPEYNPLHW*PRRDVNTQPSD 620
           L P  +P H  PR  V T P D
Sbjct: 627 LPPPPHPHHQPPRNPVGTNPHD 648


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,905
Number of Sequences: 336
Number of extensions: 4031
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)