Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00855
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.019
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.18
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 31 0.24
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.24
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.55
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 29 0.96
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 29 0.96
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 28 1.3
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 2.2
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 27 3.9
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 5.1
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 26 5.1
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 26 5.1
SPBC530.07c |||phosphomethylpyrimidine kinase|Schizosaccharomyce... 26 6.8
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 26 6.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 6.8
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 9.0
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 34.3 bits (75), Expect = 0.019
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 611 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDH--RSRLTALPGPTARNFTASSRRN 438
S S P+T+ + S S S + AS ++S+ S ++ PT+ + T SS +
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSS 295
Query: 437 SSSQPTTGSSTL 402
SSS PT+ SST+
Sbjct: 296 SSSSPTSTSSTI 307
Score = 31.9 bits (69), Expect = 0.10
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -1
Query: 611 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSS 432
S+S +P +T S S+S + ++I++S+ S ++ T + + SS + S
Sbjct: 278 SSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSS----TLSSSSMSSSSSFS 333
Query: 431 SQPTTGSSTLGVTHLRRGSSA 369
S PT+ SST+ + SS+
Sbjct: 334 SSPTSSSSTISSSSSSPSSSS 354
Score = 29.9 bits (64), Expect = 0.42
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = -1
Query: 611 SASRTPATT-IPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
S+ TP++T + S S ++P S+ S S ++ P T+ F++ S S
Sbjct: 125 SSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDP-LTSSTFSSLSSSTS 183
Query: 434 SSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQS 324
SSQP+ S++ +S Y + + + S
Sbjct: 184 SSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSS 220
Score = 29.5 bits (63), Expect = 0.55
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = -1
Query: 617 IFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHR----SRLTALPGPTARNFTAS 450
+ S+S +P+++ + S S + +P +S ++ST S + ++ + S
Sbjct: 215 VVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIIS 274
Query: 449 SRRNSSSQPTTGSSTL 402
S +SSS PT+ SST+
Sbjct: 275 SSSSSSSSPTSTSSTI 290
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.1 bits (67), Expect = 0.18
Identities = 25/83 (30%), Positives = 38/83 (45%)
Frame = -1
Query: 611 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSS 432
S S T +T+IP S S + P + S+ T++P P T+S+ NSS
Sbjct: 169 STSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSS------TSIPIPPTS--TSSTDTNSS 220
Query: 431 SQPTTGSSTLGVTHLRRGSSAHM 363
PTT +S T + G S+ +
Sbjct: 221 PLPTTSTSCTTSTSIPTGGSSSL 243
Score = 30.3 bits (65), Expect = 0.31
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 611 SASRTPAT-TIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
S+ TP T T+P STS T +P + +STD S P PT T++S S
Sbjct: 241 SSLSTPITPTVPP----TSTSSTSIPIPPTSTSSTDTNSS----PLPT----TSTSCTTS 288
Query: 434 SSQPTTGSSTLGVT 393
+S P TG+ST VT
Sbjct: 289 TSIPPTGNSTTPVT 302
Score = 28.3 bits (60), Expect = 1.3
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -1
Query: 665 ATLVTPT*CEHATF*FIFSASRT-PATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLT 489
+T VT T C +T S T P +T + +Q+ S T + ++ ++ LT
Sbjct: 583 STPVTTTNCTTSTSVLYTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSIPLT 642
Query: 488 ALPGPTARNFTASSRRNSSSQPTTGSST 405
+ T+ FT+S+ ++SS T SST
Sbjct: 643 ST-NRTSTTFTSSTSISTSSSSTATSST 669
Score = 25.8 bits (54), Expect = 6.8
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = -1
Query: 620 FIFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRR 441
FI S+S + + STS + AS ++ + S T + + SSR+
Sbjct: 706 FITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPASSTSTTTSSVSSRQ 765
Query: 440 NSSSQPTTGSSTL 402
+SSS T SS +
Sbjct: 766 SSSSSSFTPSSAI 778
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 30.7 bits (66), Expect = 0.24
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -1
Query: 599 TPAT-TIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSR-RNSSSQ 426
TPA T+P +IK S+ + ++ ++A + H+S + GP N +SR R+ +
Sbjct: 131 TPANETVP---RIKQPSIALDSLESPVSAPSRHQSTYSYKGGPLNYNLRNASRTRSHQTL 187
Query: 425 PTTGSSTLGVTHLRRGS 375
P++ + GV L R S
Sbjct: 188 PSSNVNKTGVLLLPRSS 204
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.7 bits (66), Expect = 0.24
Identities = 22/93 (23%), Positives = 43/93 (46%)
Frame = -1
Query: 590 TTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGS 411
+TIP S + + S +V+P +++ +S+ S L P A + ++ +SS T +
Sbjct: 655 STIPISSSLSTYSSSVIPSSSTLVSSS---SSLIVSSSPVASSSSSPIPSSSSLVSTYSA 711
Query: 410 STLGVTHLRRGSSAHMDYWRHARSIQAQSRLTA 312
S +TH +A S+ + + +TA
Sbjct: 712 SLSNITHSSLSLTAMSSSSAIPTSVNSSTLITA 744
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = -1
Query: 572 SQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVT 393
S STSL++ +S + S+ S T+ P + + ++SS SS P+T S + +
Sbjct: 585 SSPSSTSLSI----SSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSS 640
Query: 392 HLRRGSSA 369
+ GSS+
Sbjct: 641 SIISGSSS 648
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 0.55
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = -1
Query: 611 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSS 432
S+S T TT P+ S S+S + +S ++S+ S ++ + ++SS +SS
Sbjct: 145 SSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSS--------SSSSSSSSSSSSSS 196
Query: 431 SQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSR 321
S ++ SS+ V SS+H + S + SR
Sbjct: 197 SSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSR 233
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 28.7 bits (61), Expect = 0.96
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 547 QSSHSKP--ASQPQQTIAADSPRFLVLRHATSLPHHAATVHRSPRPDHQRLGS 395
Q SKP +S+P QT A P RH +S + A V +P H L S
Sbjct: 89 QQPLSKPVVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVSPNPAAHHAELPS 141
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 28.7 bits (61), Expect = 0.96
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = -2
Query: 457 LPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSS----STGD 290
L H +HR+P+P +R + +L + T+ A K + PQ S
Sbjct: 120 LLRHQQKIHRNPQPRRRRRSTTALPNPSLSNVSVSTTNLASKPVISLPQADSIDKFRYPK 179
Query: 289 THAAFKLSL--DSPSFEQHWPLQA 224
HAA + L +S SF W LQA
Sbjct: 180 LHAALQAQLANNSGSFSASW-LQA 202
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 328 SLDSPQTSSSTGDTHAAFKLSLDSPSFEQHWPLQANLSTDNAN 200
S+ S +TS S D A F L+ FEQ +P + N+N
Sbjct: 823 SIQSAETSRSVSDRPANFPEELNDTLFEQKYPGIVDYEEPNSN 865
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -1
Query: 485 LPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSRLTADF 306
LP P+A T+S N SS T S + H S + RH R + ++R
Sbjct: 91 LPQPSALALTSSKAANRSSTNTEKDSR-SIAHSTSRSRSTSPANRHRRKEKERTRSNHRH 149
Query: 305 EQHWRH 288
H RH
Sbjct: 150 GSHRRH 155
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 575 FSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTG 414
F+Q++S + + PQ A++AA ++ A A + +S+ ++ P G
Sbjct: 893 FAQLQSQNRALRPQNAAVAAGAQQHNQQLAAFQAVAASQNSSNNSSAGVSPIAG 946
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.1
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 596 PATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTT 417
P+ PAF +++ + P AS AST P+ N T S +SSS P T
Sbjct: 380 PSVASPAFPNSSTSNPSTAPASASPLAST---------LKPSTANDTNGSSSSSSSNPRT 430
Query: 416 GS 411
S
Sbjct: 431 SS 432
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -2
Query: 553 H*QSSHSKPASQPQQTIAADSPRFLVLRHATSLPHHAATVHRSPR 419
H ++ P P +T++ S +L +RH + H++PR
Sbjct: 230 HMYDPYTSPLRTPSRTLSRSSSHYLWVRHGKLTRSVSLLQHKTPR 274
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 26.2 bits (55), Expect = 5.1
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = -1
Query: 611 SASRTPATT-IPAFSQ--IKST--SLTVVPQQASIAASTDHRSRLTALPGPTARNFTASS 447
S S+ P+T P+ Q +KS+ SL P+ ++S + LP P + + T+S
Sbjct: 197 SLSKQPSTVHAPSTRQRDLKSSILSLYASPRPQVSSSSITTNATYQNLPSPVSTSTTSSQ 256
Query: 446 RRNSSSQP-TTGSS 408
+ QP TTGSS
Sbjct: 257 PYGAFHQPATTGSS 270
>SPBC530.07c |||phosphomethylpyrimidine kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 242
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 124 RCLNLAYDIFKIKRIHTSSEQQHSDRRSTEQYH 26
RC ++ K+K + TS EQ D + E YH
Sbjct: 97 RCKESNVEMPKLKPVPTSWEQALQDNKPEEYYH 129
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 25.8 bits (54), Expect = 6.8
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 581 PAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTL 402
P F Q L+ QQ+ I S+D S LP + NF +S +R S S L
Sbjct: 236 PIFQQAPQIPLSNASQQSYINHSSDGAS----LPQSSFLNFNSSGKRVSVSAAAQQHKNL 291
Query: 401 GVTHLRRGS 375
+ +L + S
Sbjct: 292 FLPYLPQAS 300
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 524 IAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLR 384
+A+ T + +T+L ++ + +ASS S + PT SST G H +
Sbjct: 418 LASPTSSSTFVTSLLRRSSIDGSASSSSASLAVPTVSSSTTGSLHYK 464
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 520 QPQQTIAADSPRFLV-LRHATSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTH 344
+P + S R L+ ++ T P + + H P P S + +++LH TT D
Sbjct: 236 KPPSKVMPKSRRLLLEAKYPTVSPTNEPSAHSRPSPQGTTANSSSASISSLHN-TTPDGE 294
Query: 343 AAFK 332
++
Sbjct: 295 GKYR 298
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,196,808
Number of Sequences: 5004
Number of extensions: 66743
Number of successful extensions: 296
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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