Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00855
(764 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10) 36 0.036
SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 35 0.083
SB_36072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43) 32 0.58
SB_37672| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037) 31 1.3
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 30 1.8
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 30 2.3
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 30 2.3
SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 29 3.1
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46) 29 4.1
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 29 4.1
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3) 29 5.4
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 5.4
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 29 5.4
SB_46392| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_12590| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_26222| Best HMM Match : Pneumo_NS1 (HMM E-Value=4.2) 28 9.5
SB_36306| Best HMM Match : VQ (HMM E-Value=6.9) 28 9.5
SB_13653| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10)
Length = 293
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 455 ASSRRNSSSQPTTGSSTLGVTHLRRGSSAH-MDYWRHARSIQAQSRLTADFEQHWRHARS 279
+S RN+SS TT T G TH + +S+H + W H R+ T EQH H
Sbjct: 175 SSHTRNNSSHGTT-HRTHGTTHHTQNNSSHTRNNWSHTRTTHRTQGTTRRTEQHIAHTEQ 233
Query: 278 I 276
+
Sbjct: 234 L 234
>SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 600
Score = 34.7 bits (76), Expect = 0.083
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +3
Query: 243 CSKLGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 359
CS G SR+S+N+ +SPV +V G SR+++N+ +SPV
Sbjct: 352 CSDEGLSRVSINSDTLSPVCSDV-GLSRVTINSDILSPV 389
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 243 CSKLGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 359
CS G SR+S+N+ +SPV + G SR+S+N+ +SPV
Sbjct: 257 CSDEGLSRVSINSDTLSPVCSDE-GLSRVSINSDTLSPV 294
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +3
Query: 243 CSKLGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 359
CS G SR+++N+ +SPV +V G SR+++N+ +SPV
Sbjct: 295 CSDEGLSRVTINSDILSPVCSDV-GLSRVTINSDILSPV 332
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +3
Query: 243 CSKLGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 359
CS G SR+S+N+ +SPV +V G SR+++N+ +SP+
Sbjct: 390 CSDEGLSRVSINSDILSPVCSDV-GLSRVTINSDILSPL 427
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 243 CSKLGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 359
CS G SR+S+N+ +SP+ + G SR+S+N+ SPV
Sbjct: 219 CSDEGLSRVSINSDTLSPLCSDE-GLSRVSINSDTPSPV 256
>SB_36072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 32.7 bits (71), Expect = 0.33
Identities = 28/91 (30%), Positives = 37/91 (40%)
Frame = -2
Query: 598 LRLPQSPHSRR*KARH*QSSHSKPASQPQQTIAADSPRFLVLRHATSLPHHAATVHRSPR 419
L L + H+ R + + SH K Q S L+ +HAT HA H +PR
Sbjct: 404 LTLHAATHTTRYTTHNTRFSHCKLLKQHATNTTRYSHYMLLTQHATRTTRHA---HYTPR 460
Query: 418 PDHQRLGSHISGVAALHTWTTGDTHAAFKLS 326
H +H + A T DTHA LS
Sbjct: 461 IPH---ATHTTRYAHYTLLTLHDTHAVRPLS 488
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = -1
Query: 641 CEHATF*FIFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTD---HRSRLTALPGPT 471
C AT + S T+ P + + + TV P ++ T + +T LP PT
Sbjct: 414 CPDATTKDVSSTETVSVTSAPTATLTSAPTATVTPTASNAFTETTTVTSTTTITVLPQPT 473
Query: 470 ARNFTASSRRNSSSQPTTGSSTL 402
+ ASS SS P TG++T+
Sbjct: 474 S----ASSSITPSSTPATGTATI 492
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -1
Query: 524 IAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSA 369
I S+ L ++PG ++ T+SS NS S P++ SST T SSA
Sbjct: 427 IPQSSTESQVLISVPGSQPQSSTSSSSSNSQSSPSSSSSTTSATISISKSSA 478
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -1
Query: 524 IAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSA 369
I S+ L ++PG ++ T+SS N S P++ SST T SSA
Sbjct: 497 IPQSSTESQVLISVPGSQPQSSTSSSSSNLQSSPSSSSSTTSATISISKSSA 548
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -1
Query: 506 HRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQ 327
HR R P R+ A+ + ++ Q +GS+T H R + + ++RH+ ++ +
Sbjct: 885 HRMRRRYGPEHRKRSIKANEQTITARQELSGSATKEWGHFRPSDTMYFRHFRHSETMYFR 944
Query: 326 SRLTAD--FEQHWRHARSI 276
+D + +H+RH+ ++
Sbjct: 945 HFRPSDTMYFRHFRHSETM 963
>SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43)
Length = 607
Score = 31.9 bits (69), Expect = 0.58
Identities = 30/96 (31%), Positives = 43/96 (44%)
Frame = -2
Query: 652 PRRDVNTQPSDSSSAHQELRLPQSPHSRR*KARH*QSSHSKPASQPQQTIAADSPRFLVL 473
P + +TQP +S+AH + PQ PH A HS +QPQ AA + +
Sbjct: 42 PHQATHTQPQPNSAAHTQ---PQ-PHL---AATTQPQPHSAATTQPQPHSAA-TTKPQPH 93
Query: 472 RHATSLPHHAATVHRSPRPDHQRLGSHISGVAALHT 365
AT+ P + VH P+P H + +A HT
Sbjct: 94 SAATTKPQPHSAVHTKPQP-HSAATTQPQPHSAAHT 128
>SB_37672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 31.1 bits (67), Expect = 1.0
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 5/117 (4%)
Frame = -2
Query: 616 SSAHQELRLPQSPHSR-R*KARH*QSSHSKPASQPQQTIAADSPRFLVLRHATSLPHH-- 446
SSA Q + Q P +R R ++ A QP+Q + R + RH T+ PHH
Sbjct: 186 SSARQPRQHAQPPDNRGNTHRRQITAATCAAARQPRQHAQEPAIRGNMHRHQTTTPHHMC 245
Query: 445 --AATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHA 281
AA PR Q + + T T A + Q + G+TH+
Sbjct: 246 QTAAARRAGPRQPRQHAQAPDNRGNTRRCQITAATRAGARQPRQHAQEPAIRGNTHS 302
>SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037)
Length = 1235
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -3
Query: 540 PTASQHRSLNRPSQPTH-RASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCTH 364
P+ SQ + + + P H R+++ + + T + H R +A+GH S + +
Sbjct: 650 PSDSQFQETDVKTSPGHPRSAYGHPSDSQFQETGVKTSPGHPR--SAFGHPSDSQFQESD 707
Query: 363 GLLATRTQHSSSVSTH 316
LAT+T+HS SV H
Sbjct: 708 SKLATKTKHSMSVHGH 723
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 545 VVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGV 396
+ PQQAS+ AST L L G A S+ + T+ SS GV
Sbjct: 127 IPPQQASVVASTAEAKPLKQLLGQDAPTLVTSAASRERPRTTSQSSIPGV 176
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 512 TDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAH 366
T R R P P ++ SSR+ S +PT+ SS L L+ S H
Sbjct: 385 TPPRHRRNLPPRPVSQMIMPSSRQGRSQEPTSMSSLLAGLSLQSNDSHH 433
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 29.9 bits (64), Expect = 2.3
Identities = 34/132 (25%), Positives = 47/132 (35%)
Frame = -3
Query: 732 RTPFGFDSWTYRLLVG*YLNITRYIGDPDVM*TRNLLIHLQRIKNSGYHNPRILADKKHV 553
RTP G D+ R G + + TR D TR H + + + +H
Sbjct: 49 RTPHGHDTDPTRTRHGPHTDTTRTPHGHDTDTTRTRHGHDTDTTRTPHGHDTDPTQTQHG 108
Query: 552 IDSRPTASQHRSLNRPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQL 373
D+ PT +QH P+Q H G TP + R + HT P W
Sbjct: 109 HDTNPTQTQHGPHTNPTQTPH------GPHTDPTWTPHRPNTDPTRTPHG-PHTDPTWTP 161
Query: 372 CTHGLLATRTQH 337
+ TRT H
Sbjct: 162 HRPHMDPTRTPH 173
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -3
Query: 528 QHRSLNRPSQPTHRASWSYGTQLHCLITPQQFIAAH 421
+HR+LN P P H AS SY T LI P + A H
Sbjct: 1015 RHRALNLPHTPPHAASTSYATVR--LIYPIRHRALH 1048
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -3
Query: 588 HNPRILADKKHVIDSRPTASQHRSLNRPSQPTHRASWSYGTQLHCLITPQQFIAAH 421
H P A + R +HR+L+ P P AS Y T+L I P + A H
Sbjct: 575 HTPPRAASTPYATACRIFTIRHRTLHLPHTPPRSASTPYATELR--IYPIRHRAPH 628
>SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = -1
Query: 638 EHATF*FIFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNF 459
EH F FS S TP + + S V+ +ASI S+ S + +L +
Sbjct: 2 EHTFSKFAFSGSTTPLESDSLAMKTSIASDAVLASEASIVPSSSQAS-IASLTDNASLGV 60
Query: 458 TASSRRNSS---SQPTTGSSTLGV 396
AS+ + S S TT S++LGV
Sbjct: 61 KASTTESVSLGISASTTESASLGV 84
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 399 GHTSPAWQLCTHGLL 355
GHT P W LC HG L
Sbjct: 458 GHTGPVWALCVHGEL 472
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 602 RTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSR 495
R A+T+P +Q STS T P + +S DH +R
Sbjct: 290 RRTASTLPLSNQSSSTSTTPQPSSPATPSSRDHPTR 325
>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 413 SSTLGVTHLRRGSSAHMDYWRHARSIQ--AQSRLTADFEQHWRHARS 279
+ST GVT + +S H+ WRH S Q +T+ WRH S
Sbjct: 307 TSTHGVTSHQYLASRHISTWRHVTSHQHLVSRSVTSYHISTWRHVTS 353
>SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46)
Length = 1266
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -3
Query: 408 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 325
NA+G HT P QLC G L R + SSSV
Sbjct: 858 NAFGTHTCPGEQLCLVGQLGHRARWSSSV 886
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -1
Query: 608 ASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASS--RRNS 435
AS TT A + +++TSL P + + AST + LTA P TASS
Sbjct: 162 ASAPVVTTSLASAPVETTSLASTPVETTSLASTPVDTTLTA-SSPVDTTLTASSPVETTP 220
Query: 434 SSQPTTGSSTLGVT 393
++ P ++ L T
Sbjct: 221 TASPPVKTTPLAAT 234
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1
Query: 398 VTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQHWRHARSI 276
+T + S DY R + S+++ SR T+D++QH ++ R +
Sbjct: 457 LTETKSSVSPEKDY-RGSGSVRSSSRRTSDYQQHDQNGRGV 496
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 576 ILADKKHVID---SRPTASQHRSLNRPSQPTHRASWSYGTQLHCLITPQQ 436
+L + HV+ SR + + R N Q HRA+ YG QLHC + Q+
Sbjct: 1856 VLGNSYHVVGNEASRAGSKRQRDSN-DRQRAHRAA--YGNQLHCTLDTQR 1902
>SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3)
Length = 877
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = -1
Query: 539 PQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMD 360
P S +S D L A GP T SS++ S+ S+ HL S + ++
Sbjct: 8 PNFPSSVSSQDIHDALDAFGGPFRNQDTISSKKASNRDSGVSESSFVSDHLTFTSDSLLN 67
Query: 359 YWRHARSIQAQSRLTAD 309
HA + T+D
Sbjct: 68 EIGHANQMPISHNKTSD 84
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -1
Query: 572 SQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVT 393
S I+ + V P S + T + + P + ++ RNS S+P++ SS T
Sbjct: 308 SPIRPSRPRVSPVYNSSSQKTSSKKGYSQKPSSSRDSYDRRESRNSESKPSSSSSKNRNT 367
Query: 392 HLRRG 378
L RG
Sbjct: 368 GLERG 372
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 231 KGQCCSKLGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVVHVCRAATPE 389
K Q L E R SLN ++PV+L C + N +PV+ V + +T E
Sbjct: 286 KAQLLYHLEEDR-SLNGNFLNPVVLGNCNSNMRIFNEEIFAPVIAVYKFSTDE 337
>SB_46392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 652 PRRDVNTQPSDSSSAHQELRLPQSPHSRR*KARH*QSSHSKPASQPQQTIAADSPRFL 479
P R + +SS HQE++ +SP+S + S++S+ AS P + R L
Sbjct: 180 PIRPLTAAYQAASSNHQEIKRQKSPNSEDSVSSSTDSAYSETASSPTSSHGDHDERLL 237
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 557 TSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLR 384
T L ++P+ +ST H S T+ P P R A + + S + + GS + R
Sbjct: 273 TQLQLIPRSLQKTSSTPHTSSSTSSPDPQGR---APASKGESQEKSAGSKGFSNEYFR 327
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = -1
Query: 608 ASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTAS 450
++R P TT + + +++ ++V S A+T+HR A P P+ ++ T +
Sbjct: 1339 STRPPTTTTVPTTPVATSTYSIVTTTGSSKAATEHRP--VAKPSPSRKHQTTT 1389
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 611 SASRTPATT-IPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
SA +T A A + S T + + A T + TA+PG TA T +S +
Sbjct: 2368 SAPKTTAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTTAAPKTTASPETT 2427
Query: 434 SSQPTTGSS 408
+ TTG++
Sbjct: 2428 AKPDTTGAA 2436
>SB_12590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 408 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 325
+A+G HTSP QLC G L R + SSSV
Sbjct: 305 HAFGTHTSPGKQLCLVGQLGYRGRWSSSV 333
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 611 SASRTPATT-IPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
SA +T A A + S T + + A T + TA+PG TA T +S +
Sbjct: 2911 SAPKTTAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTTAAPKTTASPETT 2970
Query: 434 SSQPTTGSS 408
+ TTG++
Sbjct: 2971 AKPDTTGAA 2979
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = -1
Query: 605 SRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQ 426
S TP ++ + S + TS + S + S+ + +LP P+ + +R + Q
Sbjct: 329 STTPGSSASSTSSLNGTSSLTSRKSQSPSKSSGSSQKKQSLP-PSIATSSVGIKRTKNPQ 387
Query: 425 PTTGSSTLGVTHLRRGS 375
P+ SS+ + H +R S
Sbjct: 388 PSLNSSSERL-HTKRSS 403
>SB_26222| Best HMM Match : Pneumo_NS1 (HMM E-Value=4.2)
Length = 350
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = -3
Query: 630 NLLIHLQRIKNSGYHNPRIL---ADKKHVI--DSRPTASQHRSLNRPSQPTHRA 484
++ ++ +R+ NSG PR++ A K+ + D + AS+ +LN QPT RA
Sbjct: 5 SVFVYSRRLVNSGNEEPRVITNSAKKRQSVTNDIQMVASESSTLN-DQQPTARA 57
>SB_36306| Best HMM Match : VQ (HMM E-Value=6.9)
Length = 109
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 149 HHTTQDN*QMPESRLRHFQ---DKAHTYKFR 66
HH TQD SR++H Q D+ TY FR
Sbjct: 10 HHGTQDRTMTYHSRVKHHQGTRDRTMTYHFR 40
>SB_13653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -3
Query: 759 IYRHRFACGRTPFGFDSWTYRLLVG*YLNIT--RYIGDPDVM*TRNLLIHLQRIKNSGYH 586
IY+H F C F D T + V +L ++ ++ +P + L + + +++G+
Sbjct: 65 IYQHAFRCLAAEFQNDKGTGKAYVEKHLVLSDVEFLPEPAMR-----LSNPVKSQSNGFK 119
Query: 585 NPRILADKKHVIDSRPTASQHRSLN 511
R++ D RPT S RS+N
Sbjct: 120 LGRVINDTTSRTLQRPTVSTSRSIN 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,726,483
Number of Sequences: 59808
Number of extensions: 590991
Number of successful extensions: 2016
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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