Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00855
(764 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 33 0.85
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 33 0.85
X55150-1|CAA38951.1| 493|Homo sapiens CD44E (epithelial form) p... 32 2.6
BC064348-1|AAH64348.1| 944|Homo sapiens chromosome 13 open read... 31 3.4
BC053566-1|AAH53566.1| 781|Homo sapiens C13orf23 protein protein. 31 3.4
BC031673-1|AAH31673.1| 271|Homo sapiens hypothetical gene suppo... 31 3.4
AL445590-3|CAI40975.1| 944|Homo sapiens chromosome 13 open read... 31 3.4
AK022723-1|BAB14204.1| 639|Homo sapiens protein ( Homo sapiens ... 31 3.4
AB107354-1|BAC67659.1| 952|Homo sapiens KIAA2032 protein protein. 31 3.4
AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens ... 31 4.5
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 31 6.0
AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens ... 31 6.0
AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens ... 31 6.0
AB065894-1|BAC06110.1| 310|Homo sapiens seven transmembrane hel... 30 7.9
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 33.5 bits (73), Expect = 0.85
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -1
Query: 611 SASRTP-ATTIPAFSQIK-STSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRN 438
S+S TP T+IP + + ST LT +P + S++ S + P + T SS +
Sbjct: 550 SSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSE-ASTTSTTPADSNTFVTTSSEAS 608
Query: 437 SSSQPTTGSSTLGVTHLRRGSS 372
SSS G+S T+ RG++
Sbjct: 609 SSSTTAEGTSMPTSTYSERGTT 630
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 33.5 bits (73), Expect = 0.85
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -1
Query: 611 SASRTP-ATTIPAFSQIK-STSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRN 438
S+S TP T+IP + + ST LT +P + S++ S + P + T SS +
Sbjct: 550 SSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSE-ASTTSTTPADSNTFVTTSSEAS 608
Query: 437 SSSQPTTGSSTLGVTHLRRGSS 372
SSS G+S T+ RG++
Sbjct: 609 SSSTTAEGTSMPTSTYSERGTT 630
>X55150-1|CAA38951.1| 493|Homo sapiens CD44E (epithelial form)
protein.
Length = 493
Score = 31.9 bits (69), Expect = 2.6
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -1
Query: 551 LTVVPQQA-SIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGS 375
L++ QQ+ S + ST H PT T+S+R + + + + G THL G
Sbjct: 252 LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTHLLEGY 311
Query: 374 SAHMDYWRHARS-IQAQSRLTADF 306
++H + + +R+ I S T F
Sbjct: 312 TSHYPHTKESRTFIPVTSAKTGSF 335
>BC064348-1|AAH64348.1| 944|Homo sapiens chromosome 13 open reading
frame 23 protein.
Length = 944
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 617 IFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHR----SRLTALPGPTARNFTAS 450
+ SA TP +IP + I++ SL P + + +T S L +LPGP+A A+
Sbjct: 320 VSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAAT 379
Query: 449 SRRNSSSQPTTGSS 408
+ + T GSS
Sbjct: 380 PTPGPTPRSTLGSS 393
>BC053566-1|AAH53566.1| 781|Homo sapiens C13orf23 protein protein.
Length = 781
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 617 IFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHR----SRLTALPGPTARNFTAS 450
+ SA TP +IP + I++ SL P + + +T S L +LPGP+A A+
Sbjct: 157 VSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAAT 216
Query: 449 SRRNSSSQPTTGSS 408
+ + T GSS
Sbjct: 217 PTPGPTPRSTLGSS 230
>BC031673-1|AAH31673.1| 271|Homo sapiens hypothetical gene
supported by BC031673 protein.
Length = 271
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = -1
Query: 599 TPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPT 420
TP PA S + S V PQ A+T RS L A PGPT + R+ +
Sbjct: 144 TPGAETPAGSGDPAASRAVSPQ-----AATSQRSLLAAAPGPTGAQLNSRQSRSRLNNGA 198
Query: 419 TG 414
G
Sbjct: 199 PG 200
>AL445590-3|CAI40975.1| 944|Homo sapiens chromosome 13 open reading
frame 23 protein.
Length = 944
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 617 IFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHR----SRLTALPGPTARNFTAS 450
+ SA TP +IP + I++ SL P + + +T S L +LPGP+A A+
Sbjct: 320 VSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAAT 379
Query: 449 SRRNSSSQPTTGSS 408
+ + T GSS
Sbjct: 380 PTPGPTPRSTLGSS 393
>AK022723-1|BAB14204.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ12661 fis, clone NT2RM4002189, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 639
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 617 IFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHR----SRLTALPGPTARNFTAS 450
+ SA TP +IP + I++ SL P + + +T S L +LPGP+A A+
Sbjct: 15 VSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAAT 74
Query: 449 SRRNSSSQPTTGSS 408
+ + T GSS
Sbjct: 75 PTPGPTPRSTLGSS 88
>AB107354-1|BAC67659.1| 952|Homo sapiens KIAA2032 protein protein.
Length = 952
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 617 IFSASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHR----SRLTALPGPTARNFTAS 450
+ SA TP +IP + I++ SL P + + +T S L +LPGP+A A+
Sbjct: 328 VSSAVHTPQPSIPNPTVIRTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAAT 387
Query: 449 SRRNSSSQPTTGSS 408
+ + T GSS
Sbjct: 388 PTPGPTPRSTLGSS 401
>AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ35214 fis, clone PROST1000512, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 325
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -1
Query: 611 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSR---R 441
S TP T+P + +K+T T ++ S ++ + + +F +SS +
Sbjct: 6 SVHSTPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQ 65
Query: 440 NSSSQPTTGSSTLGVTHL 387
NSSS+P + T + HL
Sbjct: 66 NSSSRPPSSPITTQLPHL 83
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 30.7 bits (66), Expect = 6.0
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -1
Query: 599 TPATTIPAFSQ---IKSTSLTVVPQQASIAASTDHRSRLTA-LPGPTARNFTASSRRNSS 432
T T +P FS ST + P A +A+S + S T +P PT T S+
Sbjct: 1441 TLPTHVPPFSTSLVTPSTHTVITPTHAQMASSASNHSAPTGTIPPPTTLKATGSTHTAPP 1500
Query: 431 SQPTTGSST 405
PTT ++
Sbjct: 1501 ITPTTSGTS 1509
>AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ16652 fis, clone TESTI4036767. ).
Length = 325
Score = 30.7 bits (66), Expect = 6.0
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Frame = -2
Query: 679 PEYNPLHW*PRRDVNTQPSDSSSAHQELRLPQSPHSRR*KARH*QSSHSKPASQPQQTIA 500
P+ +P H P+RD +P H R PQ + R R +H P P+
Sbjct: 65 PQRDPTHRAPQRDPTHRPPQRDPTH---RAPQRDPTHRAPQR--DPTHRAPQRGPRHRAP 119
Query: 499 ADSPRFLV-LRHATSLPHHAATVHRSPRPD 413
SPR R T HR+P+ D
Sbjct: 120 QRSPRHRAPQRDPTHRAPQRGPRHRAPQRD 149
>AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ39453 fis, clone PROST2010046, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 577
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = -2
Query: 544 SSHSKPASQPQQTIAADSPR-FLVLRHATSLPHHAATVHR---SPRPDHQRLGSHIS--- 386
S+H+ P P + + SP F + +TSLP+H ++ H +P H S
Sbjct: 26 STHTAPPMTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITFKHTSTGT 85
Query: 385 GVAALHTWTTGDTHAAFKLSLDSPQTSSS 299
HT + + + SP T SS
Sbjct: 86 RTPVAHTTSASSSRLPTPFTTHSPPTGSS 114
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -1
Query: 611 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSR---R 441
S TP T+P + +K+T T ++ S ++ + + +F +SS +
Sbjct: 175 SIHSTPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQ 234
Query: 440 NSSSQPTTGSSTLGVTHL 387
NSSS+P + T + HL
Sbjct: 235 NSSSRPPSSPITTQLPHL 252
>AB065894-1|BAC06110.1| 310|Homo sapiens seven transmembrane helix
receptor protein.
Length = 310
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 23 RMILLGRPTVRMLLFGTCMYALYLENVVSEIQASVNYLASYDGY 154
R+IL P+++ + FG C+ LY + + Q + L +YD Y
Sbjct: 85 RLILDFTPSIKAIPFGGCVAQLYFFHFLGSTQCFLYTLMAYDRY 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,524,328
Number of Sequences: 237096
Number of extensions: 2636212
Number of successful extensions: 8202
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8161
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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