Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00855
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015213-1|AAT94442.1| 1052|Drosophila melanogaster RE46469p pro...    31   1.3  
AY069521-1|AAL39666.2|  958|Drosophila melanogaster LD23810p pro...    31   1.3  
AE014296-1230|AAN12052.2| 1052|Drosophila melanogaster CG8598-PB...    31   1.3  
AE014296-1229|AAF50579.1| 1052|Drosophila melanogaster CG8598-PA...    31   1.3  
AE013599-3105|AAF46654.1|  957|Drosophila melanogaster CG9346-PA...    31   1.3  
AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-P...    31   1.7  
AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-P...    31   1.7  
BT030428-1|ABO52848.1|  467|Drosophila melanogaster IP17937p pro...    30   4.0  
AE014134-1086|AAF52377.2|  948|Drosophila melanogaster CG9508-PA...    30   4.0  
BT015974-1|AAV36859.1|  836|Drosophila melanogaster RE74713p pro...    29   5.3  
BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p pro...    29   5.3  
AY036105-1|AAK63171.1| 1321|Drosophila melanogaster zinc finger/...    29   5.3  
AF281145-1|AAK06385.1| 1376|Drosophila melanogaster AF10 protein.      29   5.3  
AF217960-1|AAF72595.1| 1323|Drosophila melanogaster Alhambra pro...    29   5.3  
AE014298-611|AAF45929.2|  483|Drosophila melanogaster CG32774-PA...    29   5.3  
AE014297-558|AAN13343.1| 1323|Drosophila melanogaster CG1070-PD,...    29   5.3  
AE014297-557|AAF54062.3| 1376|Drosophila melanogaster CG1070-PA,...    29   5.3  
AY069737-1|AAL39882.1| 1015|Drosophila melanogaster LP05501p pro...    29   7.0  
AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA ...    29   7.0  
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,...    29   7.0  
AY078077-1|AAL85927.1|  208|Drosophila melanogaster CG13581 test...    29   9.2  
AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA ...    29   9.2  
AE013599-3885|AAF47216.1|  208|Drosophila melanogaster CG13581-P...    29   9.2  

>BT015213-1|AAT94442.1| 1052|Drosophila melanogaster RE46469p
           protein.
          Length = 1052

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -1

Query: 554 SLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTG 414
           SL V+P +  +AA+   RS   A+PG ++ +  +S   N  ++ T G
Sbjct: 47  SLGVLPLKTHVAANRKGRSLFAAVPGKSSSSANSSPETNKENKKTRG 93


>AY069521-1|AAL39666.2|  958|Drosophila melanogaster LD23810p
           protein.
          Length = 958

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 604 QELRLPQSPHSRR*KARH*QSSHSKPASQPQQTIA 500
           +ELR  Q     R K +H  SSHS PA QP  + A
Sbjct: 151 EELRQIQEEREERHKYKHMASSHSAPAQQPAASAA 185


>AE014296-1230|AAN12052.2| 1052|Drosophila melanogaster CG8598-PB,
           isoform B protein.
          Length = 1052

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -1

Query: 554 SLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTG 414
           SL V+P +  +AA+   RS   A+PG ++ +  +S   N  ++ T G
Sbjct: 47  SLGVLPLKTHVAANRKGRSLFAAVPGKSSSSANSSPETNKENKKTRG 93


>AE014296-1229|AAF50579.1| 1052|Drosophila melanogaster CG8598-PA,
           isoform A protein.
          Length = 1052

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -1

Query: 554 SLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTG 414
           SL V+P +  +AA+   RS   A+PG ++ +  +S   N  ++ T G
Sbjct: 47  SLGVLPLKTHVAANRKGRSLFAAVPGKSSSSANSSPETNKENKKTRG 93


>AE013599-3105|AAF46654.1|  957|Drosophila melanogaster CG9346-PA
           protein.
          Length = 957

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 604 QELRLPQSPHSRR*KARH*QSSHSKPASQPQQTIA 500
           +ELR  Q     R K +H  SSHS PA QP  + A
Sbjct: 150 EELRQIQEEREERHKYKHMASSHSAPAQQPAASAA 184


>AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-PA
           protein.
          Length = 157

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 23/80 (28%), Positives = 36/80 (45%)
 Frame = -1

Query: 599 TPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPT 420
           T +++  + S    TS +  P  +S ++ST   S  T+ P   +   T+SS  +SSS  +
Sbjct: 22  TDSSSSDSSSSTSPTSNSSTPSTSS-SSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTS 80

Query: 419 TGSSTLGVTHLRRGSSAHMD 360
             SST   T      S   D
Sbjct: 81  PTSSTSSTTATTTAPSTSSD 100


>AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-PA
           protein.
          Length = 157

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 23/80 (28%), Positives = 36/80 (45%)
 Frame = -1

Query: 599 TPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPT 420
           T +++  + S    TS +  P  +S ++ST   S  T+ P   +   T+SS  +SSS  +
Sbjct: 22  TDSSSSDSSSSTSPTSNSSTPSTSS-SSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTS 80

Query: 419 TGSSTLGVTHLRRGSSAHMD 360
             SST   T      S   D
Sbjct: 81  PTSSTSSTTATTTAPSTSSD 100


>BT030428-1|ABO52848.1|  467|Drosophila melanogaster IP17937p
           protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 394 VTPSVDDPVVGCDELLRRDEAVKLRAVGPGSAVSRLRW 507
           V P++DD +   D ++R  + V LR    GS    ++W
Sbjct: 155 VPPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKW 192


>AE014134-1086|AAF52377.2|  948|Drosophila melanogaster CG9508-PA
           protein.
          Length = 948

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 394 VTPSVDDPVVGCDELLRRDEAVKLRAVGPGSAVSRLRW 507
           V P++DD +   D ++R  + V LR    GS    ++W
Sbjct: 136 VPPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKW 173


>BT015974-1|AAV36859.1|  836|Drosophila melanogaster RE74713p
           protein.
          Length = 836

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
 Frame = -2

Query: 679 PEYNPLHW*PRRDVNTQPSDSSSAHQELRL---PQSPHS-RR*KARH*QSSHSKPASQPQ 512
           P  NPL    ++ ++    D+S+AH++      P+SPHS +   +       +KP    +
Sbjct: 362 PHTNPLQSPVQKSMSEDEGDASNAHEDGETDEDPKSPHSVQSDLSDAFDWWFNKPKRNSK 421

Query: 511 QTIAADSPRFLVLRHATSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDT 347
           ++ A        L+H  +   HA  +  +P+  +Q    H+S   A+  W    T
Sbjct: 422 KSSAQQQHETAQLQHQQTTQQHATPL--TPQNHNQYQNQHLS--KAMTFWHQAST 472


>BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p
           protein.
          Length = 1374

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -1

Query: 611 SASRTPATTIPAFSQIKSTSLT-VVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
           SAS  P T  P    + S++ T +   +   ++ST +    T+    ++ N ++  R+  
Sbjct: 630 SASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKAD 689

Query: 434 SSQPTTGSSTLG 399
           S++ T+  ST G
Sbjct: 690 SAKSTSSISTSG 701


>AY036105-1|AAK63171.1| 1321|Drosophila melanogaster zinc
           finger/leucine zipper proteinDALF isoform C3 protein.
          Length = 1321

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -1

Query: 611 SASRTPATTIPAFSQIKSTSLT-VVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
           SAS  P T  P    + S++ T +   +   ++ST +    T+    ++ N ++  R+  
Sbjct: 578 SASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKAD 637

Query: 434 SSQPTTGSSTLG 399
           S++ T+  ST G
Sbjct: 638 SAKSTSSISTSG 649


>AF281145-1|AAK06385.1| 1376|Drosophila melanogaster AF10 protein.
          Length = 1376

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -1

Query: 611 SASRTPATTIPAFSQIKSTSLT-VVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
           SAS  P T  P    + S++ T +   +   ++ST +    T+    ++ N ++  R+  
Sbjct: 632 SASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKAD 691

Query: 434 SSQPTTGSSTLG 399
           S++ T+  ST G
Sbjct: 692 SAKSTSSISTSG 703


>AF217960-1|AAF72595.1| 1323|Drosophila melanogaster Alhambra
           protein.
          Length = 1323

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -1

Query: 611 SASRTPATTIPAFSQIKSTSLT-VVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
           SAS  P T  P    + S++ T +   +   ++ST +    T+    ++ N ++  R+  
Sbjct: 579 SASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKAD 638

Query: 434 SSQPTTGSSTLG 399
           S++ T+  ST G
Sbjct: 639 SAKSTSSISTSG 650


>AE014298-611|AAF45929.2|  483|Drosophila melanogaster CG32774-PA
           protein.
          Length = 483

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -1

Query: 599 TPATTIPAFSQIKSTSLTVVPQQASIA--ASTDHRSRLTALPGPTARN--FTASSRRNSS 432
           T +T  P  +     + T VP   +    AST  +S +T  P PT+     T ++   S+
Sbjct: 307 TTSTPQPTTTTTPQPTTTTVPTTTTTTTQASTTSQSEITTTPAPTSSTEIGTTTTTAGST 366

Query: 431 SQPTTGSSTLGVTH 390
           +  TT +ST  + +
Sbjct: 367 TTSTTTTSTTPIAY 380


>AE014297-558|AAN13343.1| 1323|Drosophila melanogaster CG1070-PD,
           isoform D protein.
          Length = 1323

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -1

Query: 611 SASRTPATTIPAFSQIKSTSLT-VVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
           SAS  P T  P    + S++ T +   +   ++ST +    T+    ++ N ++  R+  
Sbjct: 579 SASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKAD 638

Query: 434 SSQPTTGSSTLG 399
           S++ T+  ST G
Sbjct: 639 SAKSTSSISTSG 650


>AE014297-557|AAF54062.3| 1376|Drosophila melanogaster CG1070-PA,
           isoform A protein.
          Length = 1376

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -1

Query: 611 SASRTPATTIPAFSQIKSTSLT-VVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNS 435
           SAS  P T  P    + S++ T +   +   ++ST +    T+    ++ N ++  R+  
Sbjct: 632 SASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKAD 691

Query: 434 SSQPTTGSSTLG 399
           S++ T+  ST G
Sbjct: 692 SAKSTSSISTSG 703


>AY069737-1|AAL39882.1| 1015|Drosophila melanogaster LP05501p
           protein.
          Length = 1015

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 22/104 (21%), Positives = 44/104 (42%)
 Frame = -1

Query: 611 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSS 432
           SAS  P T  P    + S++ T +      ++S+   S  + +    + + ++S +R + 
Sbjct: 271 SASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTITSSGSSSNSSSKKRKAD 330

Query: 431 SQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQ 300
           S  +T S +   + L   +S    Y    + +Q       DFE+
Sbjct: 331 SAKSTSSISTSGSALEDNNSLISRY--DIKDVQVALTPLTDFEK 372


>AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA
            protein.
          Length = 4056

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 597  SGYHNPRI-LADKKHVIDSRPTASQHRSLNRPSQPT 493
            S +H+P++     + +I   PTA+ HRS+ RPS+PT
Sbjct: 1737 SRFHSPQVHQLYTQALIAESPTATNHRSI-RPSRPT 1771


>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
            isoform C protein.
          Length = 2347

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
 Frame = -2

Query: 637  NTQPSDSSSAHQELRLPQSPHSRR*KARH*QSSHSKPASQPQQTIAADSPR----FLVLR 470
            NTQ        Q+ ++P+ PH    +A+     ++ PASQ     AA   +    F  +R
Sbjct: 1217 NTQQQIQPPVQQQYQIPKEPHQ---QAQQQHQQYAPPASQQFFNCAAPKSKLQQNFQTMR 1273

Query: 469  ----HATSLPHHAATVHRSPRPDHQRLGSHISGVAALHT 365
                H    PHH       P P     GS     +A+ +
Sbjct: 1274 QVQQHYPPYPHHVGVHQIHPPPGVPFGGSAAGSTSAMRS 1312


>AY078077-1|AAL85927.1|  208|Drosophila melanogaster CG13581 testes
           protein protein.
          Length = 208

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 24/80 (30%), Positives = 31/80 (38%)
 Frame = -1

Query: 572 SQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVT 393
           +Q +S  L     Q  I +S     R  + PG  A   TASSR      P     T  VT
Sbjct: 59  TQNQSAGLASARSQLVIKSSVGATPRPGSTPGSGATRNTASSRTQHFCIPVRSCYT--VT 116

Query: 392 HLRRGSSAHMDYWRHARSIQ 333
              R SS H  +  H   ++
Sbjct: 117 SRTRRSSEHAAFLYHLSQLE 136


>AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA
            protein.
          Length = 1175

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -1

Query: 599  TPATTIPAFSQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPT 420
            T ATT P  +  +ST+++  P+  +  ++T   +       PT    T  S   ++++PT
Sbjct: 1026 TTATTTPQTTTTESTTISTTPKTTTTESTTVSTT-------PTTTESTTISTTPTTTEPT 1078

Query: 419  TGSST 405
            T S+T
Sbjct: 1079 TVSTT 1083


>AE013599-3885|AAF47216.1|  208|Drosophila melanogaster CG13581-PA
           protein.
          Length = 208

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 24/80 (30%), Positives = 31/80 (38%)
 Frame = -1

Query: 572 SQIKSTSLTVVPQQASIAASTDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVT 393
           +Q +S  L     Q  I +S     R  + PG  A   TASSR      P     T  VT
Sbjct: 59  TQNQSAGLASARSQLVIKSSVGATPRPGSTPGSGATRNTASSRTQHFCIPVRSCYT--VT 116

Query: 392 HLRRGSSAHMDYWRHARSIQ 333
              R SS H  +  H   ++
Sbjct: 117 SRTRRSSEHAAFLYHLSQLE 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,268,397
Number of Sequences: 53049
Number of extensions: 858246
Number of successful extensions: 3808
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3784
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)